VIGGS:Automatic updates

Range of date : -

Filter	Acc. No :	Description :	Species :
	Map Position ( chr:start..end ) :
	Status : Known Variant New Variant New Locus Unmapped Registered

Acc. No	Species	Description	PubMedID	Status	Map Chr	Map Positions	Strand	GBrowse	Overlap
KY436067	Medicago truncatula	Medicago truncatula EMF2 variant cL mRNA, complete cds, alternatively spliced.		Unmapped
KY436068	Medicago truncatula	Medicago truncatula EMF2 variant cL3 mRNA, complete cds, alternatively spliced.		Unmapped
KY436069	Medicago truncatula	Medicago truncatula EMF2 variant L mRNA, complete cds, alternatively spliced.		Unmapped
NM_001252710	Glycine max	Glycine max putative 60S ribosomal protein L26 (LOC100788996), mRNA.		New Variant	Chr10	24164197..24164875	-	Browse
NM_001254270	Glycine max	Glycine max AP2 domain-containing transcription factor 3 (AP2-3), mRNA.		Unmapped
NM_001254533	Glycine max	Glycine max calcium-binding EF-hand family protein (LOC100790495), mRNA.		New Variant	Chr10	23317977..23318831	-	Browse
NM_001317592	Glycine max	Glycine max MADS box transcription factor (AGL1), mRNA.	29338682	New Variant	Chr03	2709313..2713433	+	Browse
NM_001248393	Glycine max	Glycine max basic leucine zipper domain-containing protein (LOC100527640), mRNA.		Unmapped
NM_001248434	Glycine max	Glycine max putative SAUR-like auxin-responsive family protein (LOC100306459), mRNA.		New Variant	Chr02	927977..928491	-	Browse
NM_001249320	Glycine max	Glycine max cytochrome b6f complex subunit petM-like (LOC100500315), mRNA.		Unmapped
NM_001250085	Glycine max	Glycine max senescence-associated receptor-like kinase (GMSARK), mRNA.	16927199,16944565,22034630	Unmapped
NM_001251079	Glycine max	Glycine max glycinin G4 (GY4), mRNA.	1316192,2988947,21959908,23426933	Unmapped
NM_001253928	Glycine max	Glycine max soyasaponin III rhamnosyltransferase (GMSGT3), mRNA.	20075913,20350545	New Variant	Chr05	1042364..1044093	+	Browse
NM_001254074	Glycine max	Glycine max mitogen-activated protein kinase kinase kinase 2-like (LOC100798607), mRNA.		Unmapped
NM_001254169	Glycine max	Glycine max uncharacterized LOC100797343 (LOC100797343), mRNA.		Unmapped
NM_001254170	Glycine max	Glycine max probable leucine-rich repeat receptor-like protein kinase (LOC100799647), mRNA.		New Variant	Chr10	8493154..8495085	+	Browse
NM_001254286	Glycine max	Glycine max putative rapid alkalinization factor (LOC100793523), mRNA.		Unmapped
NM_001254322	Glycine max	Glycine max 9-cis-epoxycarotenoid dioxygenase 2 (NCED2), mRNA.		Unmapped
NM_001254396	Glycine max	Glycine max C2H2-type zinc finger protein (LOC100799174), mRNA.		Unmapped
NM_001254427	Glycine max	Glycine max dehydration-responsive element-binding protein 3-like (AP2-1), mRNA.		Unmapped
NM_001254570	Glycine max	Glycine max DNA-damage-repair/toleration protein DRT100-like (LOC100795366), mRNA.		New Variant	Chr06	685889..687329	+	Browse
NM_001254984	Glycine max	Glycine max anthocyanidin reductase 1 (ANR1), mRNA.	21801362,22083247,22107112	New Variant	Chr01	14289188..14291385	-	Browse
NM_001255678	Glycine max	Glycine max RNA binding protein ATAB2-like (LOC100795572), mRNA.		Unmapped
NM_001256143	Glycine max	Glycine max anthocyanidin reductase 2 (ANR2), mRNA.	22083247,22107112	Unmapped
NM_001267693	Glycine max	Glycine max zinc finger protein ZAT10-like (STF-3), mRNA.		Unmapped
NM_001249154	Glycine max	Glycine max cyclin-dependent kinase inhibitor 1-1 (LOC547743), mRNA.		Unmapped
NM_001250358	Glycine max	Glycine max late embryogenesis-abundant protein LEA1 (SLE2), mRNA.	9046601,21455835,23017910	Known Variant	Chr09	11963031..11964068	+	Browse	Vigan.09G084900.01
NM_001250970	Glycine max	Glycine max alpha-amylase inhibitor/lipid transfer/seed storage family protein (LOC100527818), mRNA.		New Variant	Chr01	51822511..51823270	+	Browse
NM_001251413	Glycine max	Glycine max fatty acid desaturase-2 (FAD2-1A), transcript variant 2, mRNA.	8587990,21681491,28348573	Unmapped
NM_001251429	Glycine max	Glycine max fatty acid desaturase-2 (GMFAD2-2C), mRNA.	8587990,28348573	New Variant	Chr04	40977838..40979392	+	Browse
NM_001251681	Glycine max	Glycine max beta-ketoacyl-ACP synthetase I (KASI), mRNA.	28235823	Known Variant	Chr01	20222867..20232512	+	Browse	Vigan.01G174500.01
NM_001253141	Glycine max	Glycine max dirigent family protein (LOC100808529), mRNA.		New Variant	Chr09	14244723..14245644	+	Browse
NM_001253217	Glycine max	Glycine max photosystem II type I chlorophyll a/b-binding protein (LHCB1-7), mRNA.	8016279	New Variant	Chr11	21887011..21887973	-	Browse
NM_001254272	Glycine max	Glycine max leucine-rich repeat disease resistance protein (LOC100801713), mRNA.		New Variant	Chr08	3459914..3461319	+	Browse
NM_001258010	Glycine max	Glycine max Na+/H+ antiporter (GMSSOS1), mRNA.	24934653	Known Variant	Chr01	22274804..22302559	+	Browse	Vigan.01G185700.01
NM_001354936	Glycine max	Glycine max omega-6 fatty acid desaturase (FAD2-1B), mRNA.	16236153,18300159,20828382,28348573	Unmapped
NM_001357489	Glycine max	Glycine max putative AP2 domain-containing protein Lf1 (LF1), mRNA.	28516383	Unmapped
NM_001360031	Glycine max	Glycine max nicotinate N-methyltransferase-like protein (LOC100784957), mRNA.		Known Variant	Chr07	29316468..29319650	+	Browse	Vigan.07G211900.01
NM_001360077	Glycine max	Glycine max fatty acid desaturase-2 (FAD2-1A), transcript variant 1, mRNA.	8587990,21681491,28348573	Unmapped
NM_001360081	Glycine max	Glycine max fatty acid desaturase-2 (GMFAD2-2B), mRNA.	28348573	New Variant	Chr04	40977838..40979390	+	Browse
NM_001360091	Glycine max	Glycine max farnesyltransferase (GMERA1B), mRNA.	28419130	New Variant	Chr11	1822236..1827654	-	Browse
NM_001360092	Glycine max	Glycine max farnesyltransferase (GMERA1A), mRNA.	28419130	New Variant	Chr11	1822236..1827654	-	Browse
NM_001250276	Glycine max	Glycine max uncharacterized LOC100306591 (LOC100306591), mRNA.		Known Variant	Chr01	54621277..54622843	+	Browse	Vigan.01G408300.01
NM_001250756	Glycine max	Glycine max lipoxygenase-2 (LOX2), mRNA.	1909908,2834391,8016074,21243331,23617075,24302153	New Variant	Chr07	2538615..2542257	-	Browse
NM_001252694	Glycine max	Glycine max AP2 domain-containing transcription factor 4 (AP2-4), mRNA.		Unmapped
NM_001252765	Glycine max	Glycine max AP2 domain-containing transcription factor 2 (AP2-2), mRNA.	23980625	New Variant	Chr02	8235881..8236834	+	Browse
NM_001252952	Glycine max	Glycine max AP2 domain-containing transcription factor 6 (AP2-6), mRNA.		New Variant	Chr02	11728306..11729019	+	Browse
NM_001254268	Glycine max	Glycine max uncharacterized LOC100810928 (LOC100810928), mRNA.		Unmapped
NM_001360138	Glycine max	Glycine max S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100817375), mRNA.	25249442,28294342	Known Variant	Chr02	14479487..14487475	+	Browse	Vigan.02G154200.01
NM_001360142	Glycine max	Glycine max major facilitator superfamily protein (LOC100816600), mRNA.	25249442,28294342	New Variant	Chr04	333471..335867	-	Browse
NM_001360146	Glycine max	Glycine max alpha/beta hydroxylase D14 (D14), transcript variant 1, mRNA.	29268717	New Variant	Chr03	40301381..40303251	+	Browse
NM_001360147	Glycine max	Glycine max alpha/beta hydroxylase D14 (D14), transcript variant 2, mRNA.	29268717	Known Variant	Chr03	40301381..40303237	+	Browse	Vigan.03G263100.01
NM_001360153	Glycine max	Glycine max translation initiation factor IF2/IF5 (LOC100778073), mRNA.		New Variant	Chr04	961716..963731	+	Browse
NM_001248881	Glycine max	Glycine max glycinin subunit G2 (GY2), mRNA.	2377465,2485233,2740230,3671077,6092376,6541652,6541653,8898910,21959908,27612614	Unmapped
NM_001248898	Glycine max	Glycine max glycinin G1 (GY1), mRNA.	2485233,2740229,2997720,17181539,21959908,23426933,25360675	Unmapped
NM_001249462	Glycine max	Glycine max stearoyl-ACP desaturase (SACPD-C), mRNA.	24886084,28461402	Known Variant	Chr03	34361774..34363743	+	Browse	Vigan.03G216100.01
NM_001249747	Glycine max	Glycine max glycinin gy5 (GY5), mRNA.	2485233,3838983,12771376,20834138,21959908	Unmapped
NM_001249911	Glycine max	Glycine max glycinin G3 (GY3), mRNA.	21959908,23908048,25360675	Unmapped
NM_001253080	Glycine max	Glycine max membrane bound O-acyl transferase domain-containing protein (LOC100809798), mRNA.		Unmapped
NM_001253256	Glycine max	Glycine max phosphatidylethanolamine-binding protein FT2a (GMFT2A), mRNA.	20864544,22195028,24155962,28509421,29120038	Known Variant	Chr11	15273607..15277848	+	Browse	Vigan.11G108800.01
NM_001253965	Glycine max	Glycine max LEA_2 domain-containing protein (LOC100793725), mRNA.		Unmapped
NM_001254335	Glycine max	Glycine max glucose-6-phosphate dehydrogenase (G6PDH), transcript variant 2, mRNA.	27285781	New Variant	Chr04	29251890..29259404	+	Browse
NM_001360011	Glycine max	Glycine max glucose-6-phosphate dehydrogenase (G6PDH), transcript variant 1, mRNA.	27285781	New Variant	Chr04	29251890..29259471	+	Browse
NM_001360150	Glycine max	Glycine max putative fructose-bisphosphate aldolase 2 (LOC100775844), mRNA.		Known Variant	Chr06	35862734..35865599	+	Browse	Vigan.06G228800.01
NM_001360156	Glycine max	Glycine max glyceraldehyde-3-phosphate dehydrogenase (LOC100781161), mRNA.		New Variant	Chr02	29985067..29987882	+	Browse
NM_001254016	Glycine max	Glycine max ribosomal protein L11 family protein (LOC100811654), mRNA.	18927222	New Variant	Chr06	32100073..32100910	+	Browse
NM_001357058	Glycine max	Glycine max phenylalanine ammonia-lyase 1 (GMPAL1.3), mRNA.	18927222,27411159,28775360	Known Variant	Chr04	45196612..45199735	+	Browse	Vigan.04G329700.01
NM_001248839	Glycine max	Glycine max tau class glutathione S-transferase (GSTU1), mRNA.		Unmapped
NM_001249240	Glycine max	Glycine max tau class glutathione S-transferase (GSTU60), mRNA.		Known Variant	Chr04	28220874..28221868	-	Browse	Vigan.04G193400.01
NM_001249303	Glycine max	Glycine max transcription factor MYB047 (GMMYB047), mRNA.		Unmapped
NM_001249658	Glycine max	Glycine max tau class glutathione S-transferase (GSTU43), mRNA.		Known Variant	Chr05	13898336..13899344	-	Browse	Vigan.05G166900.01
NM_001249668	Glycine max	Glycine max phosphatidylethanolamine-binding protein GmBFT (GMBFT), mRNA.	18573215	Known Variant	Chr11	31239086..31240439	+	Browse	Vigan.11G190300.01
NM_001250008	Glycine max	Glycine max DHAR class glutathione S-transferase (DHAR4), mRNA.		Known Variant	Chr08	781733..785076	+	Browse	Vigan.08G011200.01
NM_001250690	Glycine max	Glycine max transcription factor (WRKY57), mRNA.	18384508	Unmapped
NM_001250709	Glycine max	Glycine max transcription factor WRKY58 (WRKY58), mRNA.	18384508,27335454	Unmapped
NM_001250907	Glycine max	Glycine max phi class glutathione S-transferase (GSTF13), mRNA.		New Variant	Chr05	30287187..30288471	-	Browse	Vigan.05G245900.01
NM_001251351	Glycine max	Glycine max pathogenesis-related protein 10 (GMPR10), mRNA.		Unmapped
NM_001254053	Glycine max	Glycine max tau class glutathione S-transferase (GSTU50), mRNA.		Unmapped
NM_001254294	Glycine max	Glycine max EF1Bgamma class glutathione S-transferase (EF1BGAMMA3), mRNA.		New Variant	Chr04	22645330..22646927	-	Browse
NM_001254508	Glycine max	Glycine max putative phosphatidylethanolamine-binding protein TFL1a (GMTFL1A), mRNA.	20219831,20421496,26807727	New Variant	Chr04	46752790..46754014	-	Browse
NM_001255110	Glycine max	Glycine max phi class glutathione S-transferase (GSTF1), mRNA.		Known Variant	Chr08	23914312..23915660	+	Browse	Vigan.08G245600.01
NM_001360247	Glycine max	Glycine max putative hydroxymethylglutaryl-CoA synthase (LOC100782595), mRNA.		Known Variant	Chr10	26114230..26119014	-	Browse	Vigan.10G211100.01
NM_001360253	Glycine max	Glycine max PSI type III chlorophyll a/b-binding protein (LOC100784090), mRNA.		Known Variant	Chr03	471703..473219	+	Browse	Vigan.03G005700.01
NM_001360255	Glycine max	Glycine max ABC transporter family protein (LOC100785099), transcript variant 1, mRNA.		Known Variant	Chr07	5017970..5021707	-	Browse	Vigan.07G065600.01
NM_001360256	Glycine max	Glycine max ABC transporter family protein (LOC100785099), transcript variant 2, mRNA.		Known Variant	Chr07	5017970..5021707	-	Browse	Vigan.07G065600.01