GBrowse Details

Vigan.03G263100.01

Basic Information:
Name: Vigan.03G263100.01
Multiple alignment
Variant Information
Position: Chr03:40301163..40303347 (+ strand)
Length: 2185
Functional Information:
Description: Similar to Uncharacterized protein. [I1MXH9, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.33,2.15,88.47,44.50,12.34,83.27,9.91,23.91
Arabidopsis thaliana homolog: AT3G03990.1
Automatic updates:
Name: NM_001360147 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max alpha/beta hydroxylase D14 (D14), transcript variant 2, mRNA.
PubMed ID: 29268717 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:40301163..40301380 (+ strand)
Length: 218
Type: five_prime_UTR
Position: Chr03:40301381..40301751 (+ strand)
Length: 371
Type: CDS
Position: Chr03:40302309..40302738 (+ strand)
Length: 430
Type: CDS
Position: Chr03:40302739..40303347 (+ strand)
Length: 609
Type: three_prime_UTR

>Vigan.03G263100.01 class=Sequence position=Chr03:40301163..40303347 (+ strand)
GGAGAATGGT GTGTTGTGAT TGAGTGAAGG GTGGTGGTGG CAGTTATAAA TAGCACCCAA AGAGACAAAG GAAACAAAAT
ATAAAATTAA ACAACCACCT TCGATTCAAC TGTTTCAAAC CCCAAAGGCC ACGCGCTCTC TTTCTCTCAC ACACAAACCA
AACCCACTCC ACTTGTGTGT CGTGTGTGTG AGTGTTCCTC TCTCTGAACA AATTCGGTAT GGGGAGTTCC ATTCTGGACG
CACTCAACGT GCGCGTTGAG GGCACCGGCG ACAAGTACCT GGTCCTGGCA CACGGCTTCG GCACAGACCA GTCGGCGTGG
CAGCGCGTGC TTCCCTACTT CACGCGCCAC TACAGCGTCA TTCTCTACGA CCTGGTGTGC GCCGGCAGCG TCAACCCAGA
CCACTTCGAC TACCGCCGCT ACACCACCCT CGACGCCTAC GTCGACGACC TCCTCAACAT CCTCGAGGCC CTCCGCGTCC
CCCGCTGCGC CTACGTCGGC CACTCCATCT CTGCCATGAT CGGCATGCTA GCCTCCATCC GCCGTCCCGA CCTCTTCTCC
AAACTCATCC TCATCGGCGC CTCCCCCAGG TACCCTACCA AAACCTATCC TCATCCATTA CTGCAATTTT CTTTCTCTCC
GGTTCGATCT TTTGTTACCG CTCGTGTGCT CAGTCTCCAA TTTAAACTCT GGATGAGCCG ATTTTGCTCA TGTAGAACTA
GTATGTTTGG ATTAAATTTG AAAACACTTT TATTCACTTA ACCTTGTAAG ATCCAACGAA CTTGACAATT TCGTAGTAAT
TTATGTTGTT TGAGGTGAAA AGACTGTTGA CAAGAGTAAA ACTGTGTGAC GGAGTGTAAT TGTTCTGTGT TTGGATTGAA
ACCACGTAAT GGAATCACAA GTTACATTTA CCGCATCAAA TGGAAAGGGT AATTATGAAC ATAATAACTA AAGATACTGC
TCTTTAGTTT AATAATGAGT TTGAGATAAA AAGGAAAACA CGATTTGGGA GTGTTGAAGT TTGATCCACG AAAAGCAGTG
GAATTGAAAG GGTAATCGAG GGAAAAGAAT TTAGGAGGAT GTAATGTGTG AGTAATTGAT TGAAGAAGAG TGATTAGAAA
TCTTACTGGT GGTTGAATTT TGTCAGATTT CTGAACGACA AGGACTACCA TGGGGGATTC GAGCAGGGAG AGATCGAGCA
GGTGTTCTCG GCAATGGAGG CCAACTACGA GGCGTGGGTG AACGGTTTCG CGCCACTGGC GGTGGGGGCG GACGTGCCGA
CGGCTGTGAG GGAGTTTTCT CGGACGCTGT TCAACATGCG ACCGGACATC TCGCTGTTCG TGTCGCGCAC GGTTTTCAAC
AGCGACCTGA GGGGGATTCT TGGTCTGGTT TGCGTGCCCT GCTGCATCAT GCAAACGGCA CGTGACATGT CCGTGCCTGA
AACCGTGGCC AAATACATGA AGGAGCACAT CGGCGGGAAA AGCACCATCC AATGGCTGGA CACGGAGGGT CACCTCCCGC
ATCTCAGCGC TCCCTCCTAC CTGGCTCGGC AGTTGGAGAT CGCGCTGTCG CAGTAGCGCG TTGAGTGGCG GCGCGTGATA
GTTCATTAAT TAAATGATTA AGTGTTGCAG TAGTATTAGT GTTAGTATTA TTAGCAGTAG AAGGGTAGGG TAGAAGCTAC
TACGAAGGGT ACTAGAAGAA ATGTACGAAA GGCTCCGAAA GTGGACACGT GGCGAATAAC GTGTGGGTGT TTGCTTCTTG
GACTTTCGGA TTTTTATTTT AGGATAAGAA TCTGCACGTG GATTTCACGT GATGCGTCCC CAGTTTTAGT AGTATCTCTC
TATCAACGTA ATTATTATTA TTAAACTAAA ACATTCTCTT TATTTTTTAC TAAAATTTAT TAAATCTCAA TTAAATTTTG
AGATTTTTAT TAAATTTTAG TGGCGGATAA AGAGAGCGAT TTTAGTTTTT TTTTATCGCT TTTTGTAGTT CTTTCCTATT
TTTCGAGAGA AAAAGAATAG CAGAAATGAG AGAGACCTGT CTGTTAGTGT GATTGTAGTT TTTATTATTA ATATTATTAC
GATTGCAGTT GGTTGTTGTT GCTATTGTGA AAGGTGTTGC TTTGATTTTG TGGCCCACTT ATTATTGGGC CTCAGCCTTA
TTTGAGGTTT TTTTTTATTA ATTTA

>Vigan.03G263100.01
GGAGAATGGT GTGTTGTGAT TGAGTGAAGG GTGGTGGTGG CAGTTATAAA TAGCACCCAA AGAGACAAAG GAAACAAAAT
ATAAAATTAA ACAACCACCT TCGATTCAAC TGTTTCAAAC CCCAAAGGCC ACGCGCTCTC TTTCTCTCAC ACACAAACCA
AACCCACTCC ACTTGTGTGT CGTGTGTGTG AGTGTTCCTC TCTCTGAACA AATTCGGTAT GGGGAGTTCC ATTCTGGACG
CACTCAACGT GCGCGTTGAG GGCACCGGCG ACAAGTACCT GGTCCTGGCA CACGGCTTCG GCACAGACCA GTCGGCGTGG
CAGCGCGTGC TTCCCTACTT CACGCGCCAC TACAGCGTCA TTCTCTACGA CCTGGTGTGC GCCGGCAGCG TCAACCCAGA
CCACTTCGAC TACCGCCGCT ACACCACCCT CGACGCCTAC GTCGACGACC TCCTCAACAT CCTCGAGGCC CTCCGCGTCC
CCCGCTGCGC CTACGTCGGC CACTCCATCT CTGCCATGAT CGGCATGCTA GCCTCCATCC GCCGTCCCGA CCTCTTCTCC
AAACTCATCC TCATCGGCGC CTCCCCCAGA TTTCTGAACG ACAAGGACTA CCATGGGGGA TTCGAGCAGG GAGAGATCGA
GCAGGTGTTC TCGGCAATGG AGGCCAACTA CGAGGCGTGG GTGAACGGTT TCGCGCCACT GGCGGTGGGG GCGGACGTGC
CGACGGCTGT GAGGGAGTTT TCTCGGACGC TGTTCAACAT GCGACCGGAC ATCTCGCTGT TCGTGTCGCG CACGGTTTTC
AACAGCGACC TGAGGGGGAT TCTTGGTCTG GTTTGCGTGC CCTGCTGCAT CATGCAAACG GCACGTGACA TGTCCGTGCC
TGAAACCGTG GCCAAATACA TGAAGGAGCA CATCGGCGGG AAAAGCACCA TCCAATGGCT GGACACGGAG GGTCACCTCC
CGCATCTCAG CGCTCCCTCC TACCTGGCTC GGCAGTTGGA GATCGCGCTG TCGCAGTAGC GCGTTGAGTG GCGGCGCGTG
ATAGTTCATT AATTAAATGA TTAAGTGTTG CAGTAGTATT AGTGTTAGTA TTATTAGCAG TAGAAGGGTA GGGTAGAAGC
TACTACGAAG GGTACTAGAA GAAATGTACG AAAGGCTCCG AAAGTGGACA CGTGGCGAAT AACGTGTGGG TGTTTGCTTC
TTGGACTTTC GGATTTTTAT TTTAGGATAA GAATCTGCAC GTGGATTTCA CGTGATGCGT CCCCAGTTTT AGTAGTATCT
CTCTATCAAC GTAATTATTA TTATTAAACT AAAACATTCT CTTTATTTTT TACTAAAATT TATTAAATCT CAATTAAATT
TTGAGATTTT TATTAAATTT TAGTGGCGGA TAAAGAGAGC GATTTTAGTT TTTTTTTATC GCTTTTTGTA GTTCTTTCCT
ATTTTTCGAG AGAAAAAGAA TAGCAGAAAT GAGAGAGACC TGTCTGTTAG TGTGATTGTA GTTTTTATTA TTAATATTAT
TACGATTGCA GTTGGTTGTT GTTGCTATTG TGAAAGGTGT TGCTTTGATT TTGTGGCCCA CTTATTATTG GGCCTCAGCC
TTATTTGAGG TTTTTTTTTA TTAATTTA

>Vigan.03G263100.01
ATGGGGAGTT CCATTCTGGA CGCACTCAAC GTGCGCGTTG AGGGCACCGG CGACAAGTAC CTGGTCCTGG CACACGGCTT
CGGCACAGAC CAGTCGGCGT GGCAGCGCGT GCTTCCCTAC TTCACGCGCC ACTACAGCGT CATTCTCTAC GACCTGGTGT
GCGCCGGCAG CGTCAACCCA GACCACTTCG ACTACCGCCG CTACACCACC CTCGACGCCT ACGTCGACGA CCTCCTCAAC
ATCCTCGAGG CCCTCCGCGT CCCCCGCTGC GCCTACGTCG GCCACTCCAT CTCTGCCATG ATCGGCATGC TAGCCTCCAT
CCGCCGTCCC GACCTCTTCT CCAAACTCAT CCTCATCGGC GCCTCCCCCA GATTTCTGAA CGACAAGGAC TACCATGGGG
GATTCGAGCA GGGAGAGATC GAGCAGGTGT TCTCGGCAAT GGAGGCCAAC TACGAGGCGT GGGTGAACGG TTTCGCGCCA
CTGGCGGTGG GGGCGGACGT GCCGACGGCT GTGAGGGAGT TTTCTCGGAC GCTGTTCAAC ATGCGACCGG ACATCTCGCT
GTTCGTGTCG CGCACGGTTT TCAACAGCGA CCTGAGGGGG ATTCTTGGTC TGGTTTGCGT GCCCTGCTGC ATCATGCAAA
CGGCACGTGA CATGTCCGTG CCTGAAACCG TGGCCAAATA CATGAAGGAG CACATCGGCG GGAAAAGCAC CATCCAATGG
CTGGACACGG AGGGTCACCT CCCGCATCTC AGCGCTCCCT CCTACCTGGC TCGGCAGTTG GAGATCGCGC TGTCGCAGTA
G

>Vigan.03G263100.01
MGSSILDALN VRVEGTGDKY LVLAHGFGTD QSAWQRVLPY FTRHYSVILY DLVCAGSVNP DHFDYRRYTT LDAYVDDLLN
ILEALRVPRC AYVGHSISAM IGMLASIRRP DLFSKLILIG ASPRFLNDKD YHGGFEQGEI EQVFSAMEAN YEAWVNGFAP
LAVGADVPTA VREFSRTLFN MRPDISLFVS RTVFNSDLRG ILGLVCVPCC IMQTARDMSV PETVAKYMKE HIGGKSTIQW
LDTEGHLPHL SAPSYLARQL EIALSQ*