GBrowse Details

Vigan.07G211900.01

Basic Information:
Name: Vigan.07G211900.01
Multiple alignment
Variant Information
Position: Chr07:29316111..29319713 (+ strand)
Length: 3603
Functional Information:
Description: Similar to Uncharacterized protein. [I1M2U5, Glycine max]
GO: Molecular Function: methyltransferase activity (GO:0008168)
Molecular Function: O-methyltransferase activity (GO:0008171)
Molecular Function: protein dimerization activity (GO:0046983)
InterPro: O-methyltransferase, family 2 (IPR001077)
Winged helix-turn-helix DNA-binding domain (IPR011991)
Plant methyltransferase dimerisation (IPR012967)
Caffeate O-methyltransferase (COMT) family (IPR016461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.36,7.89,20.54,5.62,98.65,11.29,14.27,8.06
Arabidopsis thaliana homolog: AT3G53140.1
Automatic updates:
Name: NM_001360031 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max nicotinate N-methyltransferase-like protein (LOC100784957), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:29316111..29316470 (+ strand)
Length: 360
Type: five_prime_UTR
Position: Chr07:29316471..29316827 (+ strand)
Length: 357
Type: CDS
Position: Chr07:29317006..29317342 (+ strand)
Length: 337
Type: CDS
Position: Chr07:29317418..29317482 (+ strand)
Length: 65
Type: CDS
Position: Chr07:29319038..29319337 (+ strand)
Length: 300
Type: CDS
Position: Chr07:29319338..29319713 (+ strand)
Length: 376
Type: three_prime_UTR

>Vigan.07G211900.01 class=Sequence position=Chr07:29316111..29319713 (+ strand)
TATTCTGATT CATCCTATAC TGCACCCCTA GATCACATTC GTATTATCTA AAACATACTG CTTACATTTC TTCCTTAATC
AATGCCAATT AGCATCCAAG AATTACTAAT AATAAAATTA TTGTGTTAAT TTCGCTTAGC ACCGTCTCAA ACTAGTTTAA
CGGTAAAAAA ATTGAAGTGA TGACACAGCA TATACTAAAT TATTTGCATC ACCGTCCTTC CAGAGTCACG TGTTTTTACC
CTTTTTCCGT TTCACTCTCA CCGGGTTAGG TAACATCCAT TCACCTATAA ATCCCTTCCA CATCACTTCC TCTTCTCACA
AACTCCAAAA CTCTGCAACA ACATCATCAA GAAGAAAAAG ATGGAAGAGG AAGGCACGGA TTCTCGAAAG CAAGCGAGGC
TCGCAATCAT GGAACTGGCC AACATGATAA GCGTTCCGAT GGCCCTAAAC GCCGTCGTTC GCCTCAACGT CGCCGACGCC
ATCTGGAACT CCGGCGCCAA CATCCCCATC TCCGCCGCCC AGATCCTCCC CCGCATCCTC CCCGCCGGCG ACGCCGAGAA
CCTCCAGCGA CTCCTCCGCA TCCTCACCAG CTACGGCGTC TTCCACGAGC ACATCGACGC CGGTGAACGC AAGTACTCCC
TCACCGACGT CGGCAAAACG CTTGTCACTG ACGAGCAAGG CCTCTCCTAC GGGGCTTACG TGCTTCAACA CCACCAGGTC
CGATTTTTTA AGAATTTTTT TCTGATTAAA TTTGTTGGCG ACTTTTGATT TTTAATATAA ATGTGTTTAA GGAAACGAGT
TTTAATATTT TGGTGAAATA TTAAAATTCA TTAAAAAGAA AATGAATATT AATAGAAATG AATGACTCAT GTGAATGATG
TGGTTGTGTC GATAGGACGC GCTGATGCGA GCGTGGACAT TGGTTCACGA GGCAGTGGTG GACCCTACGA AGGAGCCGTT
CGAGAGGGCG AACGGAGAGG GAGCGTATGG GTATTATCTG AAGCAGGAAG AGATGAACGA GTTGATGGTG AAGGCCATGT
CAGGGGTGTC AGTGCCCTTC ATGAAGGCCA TGTTAGAGGG CTACGATGGC TTCCAAGGTG TGGAGAAGCT GGTGGACGTG
GGTGGTAGTG GCGGTGACTG CCTGCGCATG ATCCTGCAGA AACACCCCAC CATCAAGGAG GGGATCAACT TCGACCTCCC
TGAAGTTGTG GCCAAAGCAC CACCAACCCC ATGTGAGTCA CTGTTAGTAC TTGTTGCATG AGATTATGAT CACATCTGAT
TGATATCATC GTCTCATTCA TCTTTAGATG TAACCCATGT GGGTGGTGAC ATGTTCAAAT CTATTCCCCA AGGAGACGCT
ATCTTCATGA AGGTAAGTTC GTTCCTTTAT TTCAATTTAT TTAGGACAAA CTTTTAATCT TAATATAGAA AACTTTATTC
ATTAAGACAA TTGTTTGGTC TTAAATAACA TAATATTATT TTAAGATTAA TTAATTTTCT AATACATACA TTTAATATTT
AAAATTAAAC CAAAATTTAA TTATATTCAT CATTATTAGA ACTTAAATAA TATTAAAATC AGTATATTAA GGTTATATCT
TTTTATTATA CTAAAAATAA AATGTATCAT ACTTATTATA AACTATTTAT TTATTTATTT TTTAATGAAT ATTTGATTAG
CTTTTCTCAC AAAAAAGTAT GTAGAAAAAG AAAAAAAATG TTAATTTTCG TCAGATGTAA TTTTTGTCCT CTTGTTTCTA
ATAAATAAGG CTTACCGCAA TTAAAAGTTT GTGGGGCGGG CTAACTTTGC CAACGTAGAA CTCTCTCTGA AAATGCTAAT
TTTATATCTA CTATATTTTG TCATTTATTT TCTAATTACA AAAGTTGGAA AATAACTTAA CTTTTTATTT AATGGAAAAT
GATGTACTCG TTTTATTGTA TATTTAATAC GTAAAAATTG TATATGATTT TTCATTTGTA TATATATATA TATATATATA
TATATATATA TTAAAACTTA TTAGTATTAA TTAAATTAAA TTTTTATTTA TTTTTAAATT TTATTTTTTA ATTTGAAATT
AATATTGCAT TACATGAATT TCTTACAATT TTTATTATAT GCAATGTTTG CATTATTATA TAACTTTTAC TTATCGTCAC
GTAATATACA AAAAAAAGAA ATTTAATATA ATAAAATTAT AAGAAATAAT AAATAAAAAT GTAAATTAAT TAAAGGAATT
TGTAATTTGA GTTAGAAAAT TATAAAATTA ATAATTTTAA AATATCTTAT CTGAAATTTC ATATAAAAAT TAAATTAACT
CATAAAATTA AAATGGCCAG TTTTTCCTCC AGAAAAACAA TTTTCATCTT TAAGCTGAAG ATGTAGTTAT GATTTTTTTA
TTAGAGATGT CTTATGGGCA TAATATTGAG GTTTCTTTTT TTGTTAAAAT AATATTATGG GCGTTAGGTA CTAACGCCAC
AAAGTAATAA TGGAGACGCA ATTATTATTC ACCACATATA ACGGATAACG TTGGTAGGGA TAAAACAATT AATTAATCTT
ATAATTATTA ATTCATTCAT AAATTCCGTT CTCTTTCCTG TATTTTATTA TAAGCATTAT AAAACACAAC TTATTTTAAC
TATATTTCTT ACATAGCACC AATTATGAAT AATAAAAACA AATTATTACG AAGGATTGGT GCAATACTTA AATAAATTAT
TCATCTTACT TTTTATCCTT AAATTCCTAA CAAACAAAAG ATTTATGTAA TGAACAATAT GTAGATTCAT GTTGCTGTAA
AAAATTTTCC AGTGATTAGA AGATTTTGAG AGGATTAAAT GGTAGTGTTT GTCACTGTAT ACATTGTTGT GTATTTATGA
CATCTGATAT AGTTTTGCTG AATAATAAAT TGAACATTGT TTGGCAGTGG GTGCTAACAA CATGGACGGA CGAGGAAATA
AAGGAGATAA TGCGGAACTG TCACAAGGCA CTTCCTGAGG GAGGGAAAGT GATAGCTTGT GAGCCAGTGC TGCCAGAGCA
CTCAGATGAG AGTCACAGAA CAAGGGCGTT GCTTGAGGGT GACATTTTTG TGATGACAAT CTACAGAGCC AAGGGGAAGC
ACAGGACTGA AGAACAGTTC AGGCAGTTAG CCATTGATGC AGGTTTCCCT CTTTTCAGAG CCATCAATGT TGACCATTTT
TACACTGTTC TTGAGTTTCA GAAATGAAAT TAATGCAACC ATTCTTCTCT GTTTCAAGGG CATTGTTCTG TAGACAGAGT
TAAGTGGTAG TGGTTTAGGT TTTATGATAT TAGAACTGAG CTGCTTGGAG GATCAGGGCA AAGATTGTTA GATATTGATT
CTGGTATAAT GGAAAAAAAG TGCAGAATAG TACCATTTGT CACAAGTAAT AAGAAACAGA GTAACGACAG AGTAGTACCC
CCTGTAGCCT AAAGTTAAAT AACTATCTTT TCAAAAGTTA TCCTTTTATT TAAGTTAATT TGTTATTCCT AAAAGTTCAG
ACAAATTTTT AGATTATTAT CAGTAAATTT AATTTTAAGA CTCGAAATGT ATTTAAAAGT GTGCATTGTC TTATAATAGT
GAA

>Vigan.07G211900.01
TATTCTGATT CATCCTATAC TGCACCCCTA GATCACATTC GTATTATCTA AAACATACTG CTTACATTTC TTCCTTAATC
AATGCCAATT AGCATCCAAG AATTACTAAT AATAAAATTA TTGTGTTAAT TTCGCTTAGC ACCGTCTCAA ACTAGTTTAA
CGGTAAAAAA ATTGAAGTGA TGACACAGCA TATACTAAAT TATTTGCATC ACCGTCCTTC CAGAGTCACG TGTTTTTACC
CTTTTTCCGT TTCACTCTCA CCGGGTTAGG TAACATCCAT TCACCTATAA ATCCCTTCCA CATCACTTCC TCTTCTCACA
AACTCCAAAA CTCTGCAACA ACATCATCAA GAAGAAAAAG ATGGAAGAGG AAGGCACGGA TTCTCGAAAG CAAGCGAGGC
TCGCAATCAT GGAACTGGCC AACATGATAA GCGTTCCGAT GGCCCTAAAC GCCGTCGTTC GCCTCAACGT CGCCGACGCC
ATCTGGAACT CCGGCGCCAA CATCCCCATC TCCGCCGCCC AGATCCTCCC CCGCATCCTC CCCGCCGGCG ACGCCGAGAA
CCTCCAGCGA CTCCTCCGCA TCCTCACCAG CTACGGCGTC TTCCACGAGC ACATCGACGC CGGTGAACGC AAGTACTCCC
TCACCGACGT CGGCAAAACG CTTGTCACTG ACGAGCAAGG CCTCTCCTAC GGGGCTTACG TGCTTCAACA CCACCAGGAC
GCGCTGATGC GAGCGTGGAC ATTGGTTCAC GAGGCAGTGG TGGACCCTAC GAAGGAGCCG TTCGAGAGGG CGAACGGAGA
GGGAGCGTAT GGGTATTATC TGAAGCAGGA AGAGATGAAC GAGTTGATGG TGAAGGCCAT GTCAGGGGTG TCAGTGCCCT
TCATGAAGGC CATGTTAGAG GGCTACGATG GCTTCCAAGG TGTGGAGAAG CTGGTGGACG TGGGTGGTAG TGGCGGTGAC
TGCCTGCGCA TGATCCTGCA GAAACACCCC ACCATCAAGG AGGGGATCAA CTTCGACCTC CCTGAAGTTG TGGCCAAAGC
ACCACCAACC CCATATGTAA CCCATGTGGG TGGTGACATG TTCAAATCTA TTCCCCAAGG AGACGCTATC TTCATGAAGT
GGGTGCTAAC AACATGGACG GACGAGGAAA TAAAGGAGAT AATGCGGAAC TGTCACAAGG CACTTCCTGA GGGAGGGAAA
GTGATAGCTT GTGAGCCAGT GCTGCCAGAG CACTCAGATG AGAGTCACAG AACAAGGGCG TTGCTTGAGG GTGACATTTT
TGTGATGACA ATCTACAGAG CCAAGGGGAA GCACAGGACT GAAGAACAGT TCAGGCAGTT AGCCATTGAT GCAGGTTTCC
CTCTTTTCAG AGCCATCAAT GTTGACCATT TTTACACTGT TCTTGAGTTT CAGAAATGAA ATTAATGCAA CCATTCTTCT
CTGTTTCAAG GGCATTGTTC TGTAGACAGA GTTAAGTGGT AGTGGTTTAG GTTTTATGAT ATTAGAACTG AGCTGCTTGG
AGGATCAGGG CAAAGATTGT TAGATATTGA TTCTGGTATA ATGGAAAAAA AGTGCAGAAT AGTACCATTT GTCACAAGTA
ATAAGAAACA GAGTAACGAC AGAGTAGTAC CCCCTGTAGC CTAAAGTTAA ATAACTATCT TTTCAAAAGT TATCCTTTTA
TTTAAGTTAA TTTGTTATTC CTAAAAGTTC AGACAAATTT TTAGATTATT ATCAGTAAAT TTAATTTTAA GACTCGAAAT
GTATTTAAAA GTGTGCATTG TCTTATAATA GTGAA

>Vigan.07G211900.01
ATGGAAGAGG AAGGCACGGA TTCTCGAAAG CAAGCGAGGC TCGCAATCAT GGAACTGGCC AACATGATAA GCGTTCCGAT
GGCCCTAAAC GCCGTCGTTC GCCTCAACGT CGCCGACGCC ATCTGGAACT CCGGCGCCAA CATCCCCATC TCCGCCGCCC
AGATCCTCCC CCGCATCCTC CCCGCCGGCG ACGCCGAGAA CCTCCAGCGA CTCCTCCGCA TCCTCACCAG CTACGGCGTC
TTCCACGAGC ACATCGACGC CGGTGAACGC AAGTACTCCC TCACCGACGT CGGCAAAACG CTTGTCACTG ACGAGCAAGG
CCTCTCCTAC GGGGCTTACG TGCTTCAACA CCACCAGGAC GCGCTGATGC GAGCGTGGAC ATTGGTTCAC GAGGCAGTGG
TGGACCCTAC GAAGGAGCCG TTCGAGAGGG CGAACGGAGA GGGAGCGTAT GGGTATTATC TGAAGCAGGA AGAGATGAAC
GAGTTGATGG TGAAGGCCAT GTCAGGGGTG TCAGTGCCCT TCATGAAGGC CATGTTAGAG GGCTACGATG GCTTCCAAGG
TGTGGAGAAG CTGGTGGACG TGGGTGGTAG TGGCGGTGAC TGCCTGCGCA TGATCCTGCA GAAACACCCC ACCATCAAGG
AGGGGATCAA CTTCGACCTC CCTGAAGTTG TGGCCAAAGC ACCACCAACC CCATATGTAA CCCATGTGGG TGGTGACATG
TTCAAATCTA TTCCCCAAGG AGACGCTATC TTCATGAAGT GGGTGCTAAC AACATGGACG GACGAGGAAA TAAAGGAGAT
AATGCGGAAC TGTCACAAGG CACTTCCTGA GGGAGGGAAA GTGATAGCTT GTGAGCCAGT GCTGCCAGAG CACTCAGATG
AGAGTCACAG AACAAGGGCG TTGCTTGAGG GTGACATTTT TGTGATGACA ATCTACAGAG CCAAGGGGAA GCACAGGACT
GAAGAACAGT TCAGGCAGTT AGCCATTGAT GCAGGTTTCC CTCTTTTCAG AGCCATCAAT GTTGACCATT TTTACACTGT
TCTTGAGTTT CAGAAATGA

>Vigan.07G211900.01
MEEEGTDSRK QARLAIMELA NMISVPMALN AVVRLNVADA IWNSGANIPI SAAQILPRIL PAGDAENLQR LLRILTSYGV
FHEHIDAGER KYSLTDVGKT LVTDEQGLSY GAYVLQHHQD ALMRAWTLVH EAVVDPTKEP FERANGEGAY GYYLKQEEMN
ELMVKAMSGV SVPFMKAMLE GYDGFQGVEK LVDVGGSGGD CLRMILQKHP TIKEGINFDL PEVVAKAPPT PYVTHVGGDM
FKSIPQGDAI FMKWVLTTWT DEEIKEIMRN CHKALPEGGK VIACEPVLPE HSDESHRTRA LLEGDIFVMT IYRAKGKHRT
EEQFRQLAID AGFPLFRAIN VDHFYTVLEF QK*