GBrowse Details

Vigan.08G011200.01

Basic Information:
Name: Vigan.08G011200.01
Multiple alignment
Variant Information
Position: Chr08:781558..784904 (+ strand)
Length: 3347
Functional Information:
Description: Similar to Glutathione S-transferase. [W9RCX8, Morus notabilis.]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:709.09,381.85,97.68,59.52,66.66,200.92,57.88,110.08
Arabidopsis thaliana homolog: AT1G75270.1
Automatic updates:
Name: KM818410 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818413 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR4) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001250008 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR4), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:781558..781732 (+ strand)
Length: 175
Type: five_prime_UTR
Position: Chr08:781733..781790 (+ strand)
Length: 58
Type: CDS
Position: Chr08:781894..781984 (+ strand)
Length: 91
Type: CDS
Position: Chr08:782055..782198 (+ strand)
Length: 144
Type: CDS
Position: Chr08:782555..782672 (+ strand)
Length: 118
Type: CDS
Position: Chr08:782750..782890 (+ strand)
Length: 141
Type: CDS
Position: Chr08:784575..784664 (+ strand)
Length: 90
Type: CDS
Position: Chr08:784665..784904 (+ strand)
Length: 240
Type: three_prime_UTR

>Vigan.08G011200.01 class=Sequence position=Chr08:781558..784904 (+ strand)
CTTAGAAATG CTATTTCTGC CTATGTCATT TAATTATTTA ATATTTAAAA AAAAATGACA GGAGCTGTCT GATAAAGGTT
CTAAGTGAAG CAGATCGTGC ACTGAGTTGG ATTCTCCTAG TTTCTGGTTT CTTCTTTTTT CCTCTGTCTC TCTTACATTT
GATCGTCCAT CGGAAATGGC TCTTGAGGTT GCTGTCAAGG CTGCTGCTGG TGCTCCAGAT GTTCTCGGAG ACTGTATTTC
CTTCCTCTCT CTCTTCTTCT TTAACGACAT ATATCTTTGA GTTTTGATCA TTTTCTTTTT AGTATTATAA TTTTTTGCGT
TTGATTTTGA TTTTAGGTCC ATTTTGCCAA AGGGTCCTTT TAACTTTAGA GGAGAAGAAG ATTCCGTACA AGCTCAACCT
AATTGATCTC AGTAACAAAC CCGAATGGTA TTGTTGAACT TTAATGTATC ATTGTGTCTT TTTTTTTTTC AAAGAAATAT
TAATTTTTTT TTGGTAGGTT TTTGGGTGTG AATCCTGAAG GAAAGGTGCC AGTGGCTCTT TTTGATGGAA AATGGGTGCC
TGATTCTGAT GTAATTGTGG GGATTCTCCA AGAAAAGTAC CCAGAAATCT CTCTCGTTAC TCCTCCTGAA TTTGCCACCG
TGTACGGCTG CTCCATCACC TTTTTCTTTT TTCAAAACTT TACTCTTTCT TTTTGTCTGG GAATAATTTT ATCGTGTTGA
CTTTAGAGCA TATGTTTTAA CAGTAGAATT GATTTTGATA ATCAAACCGG TCCGACATTT TATTCTTACT GTGAAAATGT
TCTCACTGTT GTTGTGTTCA CTTTGGAAGA TGGTTTTTAA GAGTAATGGC TTGCCATGGT CCTTTTCTCG TTCTTTTTGG
TGACGAGCGA GGGAATTATG ATCTGTTCTA ATTTTTGTGG ATCTTTTTTT AATTTAGAGT CGTTCTTAAG TACTGAATTT
GAGTGTGCAC CATATGTTTG TTTGTTTGCT GTTGTAGGGG ATCAAAGATA TTTGGGTCTT TTGTGAGTTT TCTTAAGAGC
AAGGATCCGA ATGATGGAAC AGAGCAAGCG TTGCTGGCTG AATTGAGTGC TCTGGATGAA CATCTTAAGG CCCATGTATA
TATGTGAATT TTATATGATA CACTATTCTT TTTTTGTTTA TTTGTTATAT TTTTGTTATA TTATATGATC AGGGTCCATA
TATTGCTGGG GAGAAAGTCA CTGCTGTTGA CCTGAGTTTG GCACCAAAAC TGTACCATCT TGTGGTCGTA CTTGGCCACT
TCAAGAAATG GAGTGTTCCA GAAAGTTTGT CACATGTCCA CATCTACACT AAGGTTTGGA GTTGTTTTCT GCAATGTAGT
TACTTTGTTG GAACTATTTA TTTTGCTGTG TCTTTTATAT ACAAGTTGAA CAGTGACTGA TCGATATTTG GTGATGAGAA
TTTTGTGGTC AAACTTATCA TGCCAGTATT CTTAAAAATT CTTTAAAATG ACTGAAGTAT CAATTATTTC ATATACACTA
CTTTATATGA CTTTTAGTCT CACTAAAATG TTTGAAAAGG GAAAAACTAA AGCAAAGAAC TAAACACAAT TGGAAAAGAC
TAGGCTTTTG TTTGAGAAAA AAAAATTCAC TTGTATACTT CCCGACATGC CTAATCCTGA TTGTGCATAG TAATTCTAGG
CAGAAAGTGG TTTCATGGAC ATAAGTACTG TGCTACGGCC AAGGGTGCAC AAAAATCTGT ATATCTATTT GTGAATTGAC
CCTGCATTGA GTAATCCCTA CTTTTCTCCT CTAATTATAT TTTGAACACC AATTTGGTCC TTAAAAGATT AGTACAAAAA
TTTATAGATT AATTTGATGT CACCAATCTT TCAAGAAAAA AAAATTCATA TGCAAAAAAG ATAACAAAAC AAATTAAGGG
TCTGCTTTTG AACGGTCATG AAAGATTTGG TGTCCAATGA TTAATTCAGA CGCCTCTTGA TGTTTTCATC TGTATCTAAA
ATTTGAAGAG CGTCTTTTTC TAATTCATAT ATTGCTACAG TGCCCCTTTC TCCTTTAAAT GGGCCACAAT ATGAAACATG
CTATAAAGTG AAAATGAATG TTATATGCTT TGAGTTTGAA AAGCATAACC TATAAAGTTT GTCAAGCCTC AGGAATTCAC
CTGATTTACT TGGTCAGTCA GCGAGTTAAA AGCCTTTCTT ACATGATAAA ATGTTAATGT GTGTTTAACC CAGATCAACT
AATTTCCTGA ATTTTATGAT TTTTATCATT TGAATGTGGT CTGGCTAATT TATGAGAATT ATGATGTCTT TGATTTCTTG
TAAACAGATA AAATTGCTCT CACTGTTTCA TTTTCATGGA GTTTTTCTGA CCTTGCTTCT AGTGCCGGTT GTTGACAATT
AGAGTGCTGC TTTAGTTTTC TGTCATGTTC TCTCATTATT GCCTTGTATT TGAGATTAAT ATATCTATTG TTCTTAGATG
ATGATTTGCA TAGCTGTATG TATATTGTCA TCAACATTCA TCACATTATT ATCTCTGTTG CTTTTACTCT AGGTGCAGTA
GTTCATGAAG CTCAAATATC ACATATAGTC ATAGTGATAA TTAACTGGTT TGATGTTGGC AATGTGTTAA ATAGTAAATT
AGATTGATTA TTGAACTAGT GAAGGCATCA GCTCAGGATT CATTGGTCCA ACCATGGTCA AACAGTGATA GATATATATG
ATAGAGACCA ATATAAAACC GTAAGAAATC AGATTATATA CATAGTTAAA TTGTTGTTTT AAGTGCTTTA GACCAATTTT
CTATTAGTTG GCCTTTCTAC TAGTTGGCCA CTAGCTGGTT CACTGTTCAT TTAGTGTTTT TCTGGTTGAA TGGACCAGGA
AAATATGTAT TATGGGTCCA TATCCTACAA CATAACTCTT TTTGAACATG AAAAGTAAAA AAGGATGTAA TTGCGTGTTT
GAATGTTATA GCTGTAGATG ATTTAGCTGG TTAATGGACA ATTATCTTCT ATTGCAGCTG CTCTTCTCCC GTGAGTCATT
TGAGAAAACC AAGCCTCCAA AGGAAGAGTT TGTTATTGCT GGATGGGCAC CAAAAGTGAA TGCTTGAAGT AGTTCTAAAT
TATGAGGTAT CTGAACATCA TTTGTGTACT GTGACTGAAA CTTGTTAACA ATAGGATGTT CAACTCATCA AGTTTAAGAA
TGTGTTGTTC ACCTATTAAG TAATAATAAT AATAATAAAT ATGTAGTTTG CTGGTGTGTA CATTATGAAT TTCAAAGCTA
TATATACTTT ATTTCTTCAT CAATTGATTG TTAAATTACT ATGATTAATG AGATGCCCTT CTGTTTA

>Vigan.08G011200.01
CTTAGAAATG CTATTTCTGC CTATGTCATT TAATTATTTA ATATTTAAAA AAAAATGACA GGAGCTGTCT GATAAAGGTT
CTAAGTGAAG CAGATCGTGC ACTGAGTTGG ATTCTCCTAG TTTCTGGTTT CTTCTTTTTT CCTCTGTCTC TCTTACATTT
GATCGTCCAT CGGAAATGGC TCTTGAGGTT GCTGTCAAGG CTGCTGCTGG TGCTCCAGAT GTTCTCGGAG ACTGTCCATT
TTGCCAAAGG GTCCTTTTAA CTTTAGAGGA GAAGAAGATT CCGTACAAGC TCAACCTAAT TGATCTCAGT AACAAACCCG
AATGGTTTTT GGGTGTGAAT CCTGAAGGAA AGGTGCCAGT GGCTCTTTTT GATGGAAAAT GGGTGCCTGA TTCTGATGTA
ATTGTGGGGA TTCTCCAAGA AAAGTACCCA GAAATCTCTC TCGTTACTCC TCCTGAATTT GCCACCGTGG GATCAAAGAT
ATTTGGGTCT TTTGTGAGTT TTCTTAAGAG CAAGGATCCG AATGATGGAA CAGAGCAAGC GTTGCTGGCT GAATTGAGTG
CTCTGGATGA ACATCTTAAG GCCCATGGTC CATATATTGC TGGGGAGAAA GTCACTGCTG TTGACCTGAG TTTGGCACCA
AAACTGTACC ATCTTGTGGT CGTACTTGGC CACTTCAAGA AATGGAGTGT TCCAGAAAGT TTGTCACATG TCCACATCTA
CACTAAGCTG CTCTTCTCCC GTGAGTCATT TGAGAAAACC AAGCCTCCAA AGGAAGAGTT TGTTATTGCT GGATGGGCAC
CAAAAGTGAA TGCTTGAAGT AGTTCTAAAT TATGAGGTAT CTGAACATCA TTTGTGTACT GTGACTGAAA CTTGTTAACA
ATAGGATGTT CAACTCATCA AGTTTAAGAA TGTGTTGTTC ACCTATTAAG TAATAATAAT AATAATAAAT ATGTAGTTTG
CTGGTGTGTA CATTATGAAT TTCAAAGCTA TATATACTTT ATTTCTTCAT CAATTGATTG TTAAATTACT ATGATTAATG
AGATGCCCTT CTGTTTA

>Vigan.08G011200.01
ATGGCTCTTG AGGTTGCTGT CAAGGCTGCT GCTGGTGCTC CAGATGTTCT CGGAGACTGT CCATTTTGCC AAAGGGTCCT
TTTAACTTTA GAGGAGAAGA AGATTCCGTA CAAGCTCAAC CTAATTGATC TCAGTAACAA ACCCGAATGG TTTTTGGGTG
TGAATCCTGA AGGAAAGGTG CCAGTGGCTC TTTTTGATGG AAAATGGGTG CCTGATTCTG ATGTAATTGT GGGGATTCTC
CAAGAAAAGT ACCCAGAAAT CTCTCTCGTT ACTCCTCCTG AATTTGCCAC CGTGGGATCA AAGATATTTG GGTCTTTTGT
GAGTTTTCTT AAGAGCAAGG ATCCGAATGA TGGAACAGAG CAAGCGTTGC TGGCTGAATT GAGTGCTCTG GATGAACATC
TTAAGGCCCA TGGTCCATAT ATTGCTGGGG AGAAAGTCAC TGCTGTTGAC CTGAGTTTGG CACCAAAACT GTACCATCTT
GTGGTCGTAC TTGGCCACTT CAAGAAATGG AGTGTTCCAG AAAGTTTGTC ACATGTCCAC ATCTACACTA AGCTGCTCTT
CTCCCGTGAG TCATTTGAGA AAACCAAGCC TCCAAAGGAA GAGTTTGTTA TTGCTGGATG GGCACCAAAA GTGAATGCTT
GA

>Vigan.08G011200.01
MALEVAVKAA AGAPDVLGDC PFCQRVLLTL EEKKIPYKLN LIDLSNKPEW FLGVNPEGKV PVALFDGKWV PDSDVIVGIL
QEKYPEISLV TPPEFATVGS KIFGSFVSFL KSKDPNDGTE QALLAELSAL DEHLKAHGPY IAGEKVTAVD LSLAPKLYHL
VVVLGHFKKW SVPESLSHVH IYTKLLFSRE SFEKTKPPKE EFVIAGWAPK VNA*