GBrowse Details

Vigan.04G193400.01

Basic Information:
Name: Vigan.04G193400.01
Multiple alignment
Variant Information
Position: Chr04:28220547..28221925 (- strand)
Length: 1379
Functional Information:
Description: Similar to Uncharacterized protein. [H2FH48, Phaseolus vulgaris]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:155.05,154.28,187.83,130.40,334.29,51.45,135.89,107.29
Automatic updates:
Name: BT099210 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-16J20 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: KM818447 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU30) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818448 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU33) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818468 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU60) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001249240 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU60), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001317640 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable glutathione S-transferase (LOC100805827), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:28220547..28220870 (- strand)
Length: 324
Type: three_prime_UTR
Position: Chr04:28220871..28221227 (- strand)
Length: 357
Type: CDS
Position: Chr04:28221548..28221868 (- strand)
Length: 321
Type: CDS
Position: Chr04:28221869..28221925 (- strand)
Length: 57
Type: five_prime_UTR

>Vigan.04G193400.01 class=Sequence position=Chr04:28220547..28221925 (- strand)
CACCAAGCTA AGTGTTTGAA AGTGATTATC AAAAGTCTTT TGAATTGAAG TGCTTCGATG GGTTCAAGTC AGGAAGAAGT
GACCCTTCTG GGAGCTAGTG GAAGCCCATT TGTTTGCAGG GTGAAGATAG CCCTGAAGTT GAAGGACGTT GAATACAAAT
ACGTGGAAGA AAATTTGGGC AACAAGAGTG AACAGCTTCT GAAATACAAC CCAGTTCACA AGAAGGTTCC AGTTCTTGTT
CACGGTGAGA AACCCCTTGC AGAGTCTCTT GTGATTGTTG AGTACATCGA TGAGACATGG AACAACAATC CCATCTTGCC
TTCCGATCCT TACCAGAGAG CCTTGGCTCG TTTCTGGTCC AAATTCATCG ATGACAAGGT AACCATTGTT TTCCACTTTT
CTTCCTTTTT CTTCGTTTAT CCCAAAAACA CCACCTTTCA TGACATGTTG TAAATGTTAA ATCTTGGAAT AAGTTAGACA
ACTTTATCTA AAGTCATATG ATGGTTGATG TTGAAGATCT TGTATCTATC GGTAATAGGA ACAGAATATA CAAGTGAGAA
GCAATCCTGA ATATGGTAGT TGATTTTGTG GGATTGTGAA ATTGAGTTAC TCTAAGTTGA TAAAGTTAAT TTAAACTGCC
TTAAATTATT GTGATTTATA CAACAGTGGC TAATAAACAG TGTGATTTAT GAAATCAGAT TGTGGGTGCT TCGTGGAAAT
CTGTTTTCAC GGTTGATGAG AAAGAGCGTG AGAAGAATGT TGCAGAAGCA TATGAGAGTC TGCAGTTTCT TGAGAACGAG
ATAAAGGAGA AGAAGTTCTT CGGAGGAGAG GAGCTTGGGT TGGTAGATAT TGCTGCTGTC TATGTAGCAT TTTGGATCCC
TTTGATTCAA GAAATAGCAG GGTTGGAGTT ATTGACAAGT GAGAAATTTC CTAATCTCTA CAGGTGGGGC CAAGAATTTG
TGAACCATCC AATTGTGAAA GAAAGTCTTC CCCCTAGAGA CCCAGTTTTT GGCTTTTTTA AAGGACGCTA TGAAGGCCTT
TTTGCTTCAA AATAGATTTG ATGTTGTGAG AGATTTAGAA TTTCTAAGGA AAATTGTGTG GAGTACTACT TAGTTAGGAT
TTGGTTTCAA AATTATGGTT GAAGTTGAAA TCTAGGATTT GCGCATGTCA AACAAATAAC CTTGGATTGT CGTGTTGATA
TTTTACTATT TCAATCAATA AATTATGCAC TCGTCGAAGG TATTGTGAAA TGAATATTGG AACGGTTTAA AAACACGGAT
TCAATGTCTC ATGTCAATCG AAATAAGGAC CAACAAGATT AAATCATTAG TACAAAAACA TTACAAAAGT AGTGTATAAC
TGCACACGTT CAACCTCCA

>Vigan.04G193400.01
CACCAAGCTA AGTGTTTGAA AGTGATTATC AAAAGTCTTT TGAATTGAAG TGCTTCGATG GGTTCAAGTC AGGAAGAAGT
GACCCTTCTG GGAGCTAGTG GAAGCCCATT TGTTTGCAGG GTGAAGATAG CCCTGAAGTT GAAGGACGTT GAATACAAAT
ACGTGGAAGA AAATTTGGGC AACAAGAGTG AACAGCTTCT GAAATACAAC CCAGTTCACA AGAAGGTTCC AGTTCTTGTT
CACGGTGAGA AACCCCTTGC AGAGTCTCTT GTGATTGTTG AGTACATCGA TGAGACATGG AACAACAATC CCATCTTGCC
TTCCGATCCT TACCAGAGAG CCTTGGCTCG TTTCTGGTCC AAATTCATCG ATGACAAGAT TGTGGGTGCT TCGTGGAAAT
CTGTTTTCAC GGTTGATGAG AAAGAGCGTG AGAAGAATGT TGCAGAAGCA TATGAGAGTC TGCAGTTTCT TGAGAACGAG
ATAAAGGAGA AGAAGTTCTT CGGAGGAGAG GAGCTTGGGT TGGTAGATAT TGCTGCTGTC TATGTAGCAT TTTGGATCCC
TTTGATTCAA GAAATAGCAG GGTTGGAGTT ATTGACAAGT GAGAAATTTC CTAATCTCTA CAGGTGGGGC CAAGAATTTG
TGAACCATCC AATTGTGAAA GAAAGTCTTC CCCCTAGAGA CCCAGTTTTT GGCTTTTTTA AAGGACGCTA TGAAGGCCTT
TTTGCTTCAA AATAGATTTG ATGTTGTGAG AGATTTAGAA TTTCTAAGGA AAATTGTGTG GAGTACTACT TAGTTAGGAT
TTGGTTTCAA AATTATGGTT GAAGTTGAAA TCTAGGATTT GCGCATGTCA AACAAATAAC CTTGGATTGT CGTGTTGATA
TTTTACTATT TCAATCAATA AATTATGCAC TCGTCGAAGG TATTGTGAAA TGAATATTGG AACGGTTTAA AAACACGGAT
TCAATGTCTC ATGTCAATCG AAATAAGGAC CAACAAGATT AAATCATTAG TACAAAAACA TTACAAAAGT AGTGTATAAC
TGCACACGTT CAACCTCCA

>Vigan.04G193400.01
ATGGGTTCAA GTCAGGAAGA AGTGACCCTT CTGGGAGCTA GTGGAAGCCC ATTTGTTTGC AGGGTGAAGA TAGCCCTGAA
GTTGAAGGAC GTTGAATACA AATACGTGGA AGAAAATTTG GGCAACAAGA GTGAACAGCT TCTGAAATAC AACCCAGTTC
ACAAGAAGGT TCCAGTTCTT GTTCACGGTG AGAAACCCCT TGCAGAGTCT CTTGTGATTG TTGAGTACAT CGATGAGACA
TGGAACAACA ATCCCATCTT GCCTTCCGAT CCTTACCAGA GAGCCTTGGC TCGTTTCTGG TCCAAATTCA TCGATGACAA
GATTGTGGGT GCTTCGTGGA AATCTGTTTT CACGGTTGAT GAGAAAGAGC GTGAGAAGAA TGTTGCAGAA GCATATGAGA
GTCTGCAGTT TCTTGAGAAC GAGATAAAGG AGAAGAAGTT CTTCGGAGGA GAGGAGCTTG GGTTGGTAGA TATTGCTGCT
GTCTATGTAG CATTTTGGAT CCCTTTGATT CAAGAAATAG CAGGGTTGGA GTTATTGACA AGTGAGAAAT TTCCTAATCT
CTACAGGTGG GGCCAAGAAT TTGTGAACCA TCCAATTGTG AAAGAAAGTC TTCCCCCTAG AGACCCAGTT TTTGGCTTTT
TTAAAGGACG CTATGAAGGC CTTTTTGCTT CAAAATAG

>Vigan.04G193400.01
MGSSQEEVTL LGASGSPFVC RVKIALKLKD VEYKYVEENL GNKSEQLLKY NPVHKKVPVL VHGEKPLAES LVIVEYIDET
WNNNPILPSD PYQRALARFW SKFIDDKIVG ASWKSVFTVD EKEREKNVAE AYESLQFLEN EIKEKKFFGG EELGLVDIAA
VYVAFWIPLI QEIAGLELLT SEKFPNLYRW GQEFVNHPIV KESLPPRDPV FGFFKGRYEG LFASK*