GBrowse Details

Vigan.06G228800.01

Basic Information:
Name: Vigan.06G228800.01
Multiple alignment
Variant Information
Position: Chr06:35862405..35865487 (+ strand)
Length: 3083
Functional Information:
Description: Similar to Fructose-bisphosphate aldolase. [T2DLU1, Phaseolus vulgaris]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332)
InterPro: Fructose-bisphosphate aldolase, class-I (IPR000741)
Aldolase-type TIM barrel (IPR013785)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:45.20,64.76,304.54,4401.74,15.29,431.14,5.02,479.26
Arabidopsis thaliana homolog: AT2G01140.1, AT2G21330.1, AT4G38970.1
Automatic updates:
Name: NM_001360150 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative fructose-bisphosphate aldolase 2 (LOC100775844), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:35862405..35862733 (+ strand)
Length: 329
Type: five_prime_UTR
Position: Chr06:35862734..35862910 (+ strand)
Length: 177
Type: CDS
Position: Chr06:35863375..35863644 (+ strand)
Length: 270
Type: CDS
Position: Chr06:35864001..35864110 (+ strand)
Length: 110
Type: CDS
Position: Chr06:35864231..35864321 (+ strand)
Length: 91
Type: CDS
Position: Chr06:35864624..35864893 (+ strand)
Length: 270
Type: CDS
Position: Chr06:35864973..35865251 (+ strand)
Length: 279
Type: CDS
Position: Chr06:35865252..35865487 (+ strand)
Length: 236
Type: three_prime_UTR

>Vigan.06G228800.01 class=Sequence position=Chr06:35862405..35865487 (+ strand)
CACAAACAAC AATAATTGGT ACCCTTTTTG GTGCATGTAA TACATTTGTC ACTACTAGTA ACACAATGGC AAAATAATAT
CAATCTTTTT TCCAACTCTT TTTTACGAGG CGAGAAAAAA AGCATCCATT TGAACCACGA AATGGCAGCT CAGAATGGCA
AGGAAGCTCA AGTTATCATC CACATGTCAA GTGAGGATAG GTTAGCTCAC AGCAGCCTCA AACGAGACAT CACTTGAGAA
CTATAAATGA AGCGAAAACG TTGCATGTGT GGTAACGAGG CCAATACAAG GTTGTTCTGT AGGAGATAAG ATTGTGGTAG
TGCTCATCAA TGGCCTCTGC ATCACCCTCT CTGCTCAAGT CTTCACTTGT TCTTGACAAG TCTGAGTGGG TGAAGGGTCA
ATCCCTTCGC CAACCTTCTG CATCAGTGGT CAGATGCAGC CCCACCAACC CTTCAGCCCT CACCATCAGA GCTGGTTCAT
ATGCTGAGGA GCTTGTTAAG ACCGCGGTAT GATAATAAAA ATCTCATCTT TCATACTCTT TATTTTTATG TGACTTCTTT
CTGTTTAACT TCTTCACCAG TTCAGATTGT TTTAACTGAT GAACAAGCTA AATGCAGTTA CCCTTTTCTC TAATGGAAAA
TTTTATCTAA ACAACCCAAG ATAGACACTA AGAGCATCTT GCAATTAAAC TAAATTGAAA CTGTTCACAC CCATAAACTC
ATAATCCGTT TCTTGTTTTC CAACTGGCTT TGTTAGAATT TAGAGGACAG AAGGTAGTTG TAACTTTCTG TCATACTTGA
GATTATGGTT ATTAAGTGCG TGCTTTAGTA TTGTAGCCGT GAAAATTTTC TTAGCAGTGA ATATGACTTT ACTTTCTTTT
CTAATTATCT TTGTGGTTGT TCTTGTTTGC TCCTGAAGTG TGTTTTTGAC ATTGTTGATG CGAATGGTAT TTTGCTGCGT
GTGAAAACAG AAAACTGTGG CTTCACCAGG GAGGGGAATT TTGGCCATGG ATGAGTCCAA TGCTACCTGT GGGAAGCGTT
TGGCGTCAAT TGGGCTAGAG AATACTGAAG CTAACCGCCA GGCATACCGT ACCCTTCTTG TGACAGTTCC AGGCCTTGGT
CAATACATCT CTGGTGCCAT TCTCTTTGAG GAAACTCTCT ACCAATCCAC AATTGATGGC AAGAAGATTG TTGATGTTCT
CATTGAGCAA AACATTGTTC CTGGTATTAA GGTCGACAAG GTAACAATTT CAGAATCACC CTTTCCTTCC TTTATTATGC
AGTCACTGAC ACCTTAAATA ACAATGAAAA GAAGTAGCAT GAGTATTGAT GGATGTTAAT GTTAAAGATT TACTTTTTAA
TAGTTTATAC TTATACTTAA TTGTACTGTT AATGGTATAT TTGTCGGTGT CCATGTAGAA AAATGTTCCA CGTCTCACAT
AAACACAGCT TAGTTATAAT AACATACCAG AAGTTAGCTT TTTTTATAGT TCAGAATGGT GAAAATCTCG ATTTTGAACT
AAAATAGAGG CTTCGAATCT GCATGTATGG CGGTGTATGT ACTTTTAAAT CATGGTTTAT GTGCTTGAGA CAACAGGGTT
TGGTTCCTCT TGTTGGCTCC AACGATGAGT CATGGTGCCA AGGTTTGGAT GGTCTTGCCT CTCGCTCAGC TGCATACTAT
CAGCAAGGTG CCCGTTTCGC CAAATGGTAA GTGTTCGTCG CCCTTTGCAG TGGCAGAAAA ATCATTCATA GTTTTATGCC
CTTTATTTTC TTGTGCCACA CATCATGCTC ATTTTTTTAT CATATCAACC CATAACTCCA TATTAGGCGT ACTGTTGTGA
GTATCCCCAA CGGTCCCTCT GCTCTGGCTG TCAAGGAAGC AGCCTGGGGT CTGGCCCGCT ATGCTGCAAT TTCTCAGGTG
AGAAAACCAC TCGAGTTGAA TTGGTGATTT GGGGTTTGGC TGGATACTTT TTGTTGAGAA TTTCAATTTC AAGTTCAAGT
CTTTCATTCG ATAAAAATAA GAAAGTTGTG AGAAAGTTGA GTTACATATA AGCAAAAGAA CCATAAATTC ATTATCTTTA
AGATTTTGGA ACGTGTCTGT CTCTTGTCTC ATTTGGTGTT ATATCTTCCG ATGAAATTCT CCACTCGAAT GACCCATCAA
CTTTCTACAT GTTTGTACTG ATTCTGAAGA GCCAAAATGT TTTCATTTAA TGGTTTTAGG ACAATGGATT GGTGCCAATT
GTGGAGCCAG AAATCTTGCT TGATGGGGAG CATAATATTC ATAGAACTTT TGAAGTAGCC CAAAAGGTAT GGGCAGAGGT
GTTCTTCTAC CTTGCTGAGA ACAATGTCCT TTTTGAGGGT ATTCTCCTGA AGCCTAGCAT GGTTACACCT GGAGCTGAAT
CAAAGGAGAA GGCAAGTCCT CAAACAGTAG CTGATTACAC CCTCAAGCTC CTTCACAGGA GAATCCCCCC TGCAGTCCCT
GGAATTATGG TAAGTGACAC TGCCAAATGC ATCATTCTTT GCATTCTTAA CATCCCTTTC ATGTGCTCAC CAAAGTTGTG
TTATGCAGTT TTTGTCTGGT GGACAGTCTG AGGTTGAAGC TACCCTGAAT TTGAATGCCA TGAACCAATC TCCAAACCCA
TGGCACGTGT CATTCTCATA TGCCAGAGCC CTTCAAAACA CTGCCTTGAA GACATGGGGA GGGCGCCCAG AGAATGTGAA
GGCGTCACAA GATGCACTCC TTTTCCGTGC CAAGTCCAAC TCACTGGCTC AGCTTGGAAA GTACACTGGT GAGGGTGAAT
CTGAAGAGGC CAAGAAGGAG TTGTTCGTCA AAGGTTACTC CTACTAAGAT GTTTCTAGTG CATATGATAC ATGTTAGGCA
CCAACACCAG CAGTTGCAGT AGGTGTTGAC GGAGATGAAG TGGAAGACTA ATTTCTGTAA AATGTAATGT TTTTATAGTC
TTGGAGACTA TTTTTGTTTA TGGTTTACAT CTTCCTTTAC AACTTAATAA ACCTTTTGCT ATGAGTTGTG CATTTTAATA
TATCCCCATA TATAACAAAA TGGTTGAATC TCGGCAACTG ATG

>Vigan.06G228800.01
CACAAACAAC AATAATTGGT ACCCTTTTTG GTGCATGTAA TACATTTGTC ACTACTAGTA ACACAATGGC AAAATAATAT
CAATCTTTTT TCCAACTCTT TTTTACGAGG CGAGAAAAAA AGCATCCATT TGAACCACGA AATGGCAGCT CAGAATGGCA
AGGAAGCTCA AGTTATCATC CACATGTCAA GTGAGGATAG GTTAGCTCAC AGCAGCCTCA AACGAGACAT CACTTGAGAA
CTATAAATGA AGCGAAAACG TTGCATGTGT GGTAACGAGG CCAATACAAG GTTGTTCTGT AGGAGATAAG ATTGTGGTAG
TGCTCATCAA TGGCCTCTGC ATCACCCTCT CTGCTCAAGT CTTCACTTGT TCTTGACAAG TCTGAGTGGG TGAAGGGTCA
ATCCCTTCGC CAACCTTCTG CATCAGTGGT CAGATGCAGC CCCACCAACC CTTCAGCCCT CACCATCAGA GCTGGTTCAT
ATGCTGAGGA GCTTGTTAAG ACCGCGAAAA CTGTGGCTTC ACCAGGGAGG GGAATTTTGG CCATGGATGA GTCCAATGCT
ACCTGTGGGA AGCGTTTGGC GTCAATTGGG CTAGAGAATA CTGAAGCTAA CCGCCAGGCA TACCGTACCC TTCTTGTGAC
AGTTCCAGGC CTTGGTCAAT ACATCTCTGG TGCCATTCTC TTTGAGGAAA CTCTCTACCA ATCCACAATT GATGGCAAGA
AGATTGTTGA TGTTCTCATT GAGCAAAACA TTGTTCCTGG TATTAAGGTC GACAAGGGTT TGGTTCCTCT TGTTGGCTCC
AACGATGAGT CATGGTGCCA AGGTTTGGAT GGTCTTGCCT CTCGCTCAGC TGCATACTAT CAGCAAGGTG CCCGTTTCGC
CAAATGGCGT ACTGTTGTGA GTATCCCCAA CGGTCCCTCT GCTCTGGCTG TCAAGGAAGC AGCCTGGGGT CTGGCCCGCT
ATGCTGCAAT TTCTCAGGAC AATGGATTGG TGCCAATTGT GGAGCCAGAA ATCTTGCTTG ATGGGGAGCA TAATATTCAT
AGAACTTTTG AAGTAGCCCA AAAGGTATGG GCAGAGGTGT TCTTCTACCT TGCTGAGAAC AATGTCCTTT TTGAGGGTAT
TCTCCTGAAG CCTAGCATGG TTACACCTGG AGCTGAATCA AAGGAGAAGG CAAGTCCTCA AACAGTAGCT GATTACACCC
TCAAGCTCCT TCACAGGAGA ATCCCCCCTG CAGTCCCTGG AATTATGTTT TTGTCTGGTG GACAGTCTGA GGTTGAAGCT
ACCCTGAATT TGAATGCCAT GAACCAATCT CCAAACCCAT GGCACGTGTC ATTCTCATAT GCCAGAGCCC TTCAAAACAC
TGCCTTGAAG ACATGGGGAG GGCGCCCAGA GAATGTGAAG GCGTCACAAG ATGCACTCCT TTTCCGTGCC AAGTCCAACT
CACTGGCTCA GCTTGGAAAG TACACTGGTG AGGGTGAATC TGAAGAGGCC AAGAAGGAGT TGTTCGTCAA AGGTTACTCC
TACTAAGATG TTTCTAGTGC ATATGATACA TGTTAGGCAC CAACACCAGC AGTTGCAGTA GGTGTTGACG GAGATGAAGT
GGAAGACTAA TTTCTGTAAA ATGTAATGTT TTTATAGTCT TGGAGACTAT TTTTGTTTAT GGTTTACATC TTCCTTTACA
ACTTAATAAA CCTTTTGCTA TGAGTTGTGC ATTTTAATAT ATCCCCATAT ATAACAAAAT GGTTGAATCT CGGCAACTGA
TG

>Vigan.06G228800.01
ATGGCCTCTG CATCACCCTC TCTGCTCAAG TCTTCACTTG TTCTTGACAA GTCTGAGTGG GTGAAGGGTC AATCCCTTCG
CCAACCTTCT GCATCAGTGG TCAGATGCAG CCCCACCAAC CCTTCAGCCC TCACCATCAG AGCTGGTTCA TATGCTGAGG
AGCTTGTTAA GACCGCGAAA ACTGTGGCTT CACCAGGGAG GGGAATTTTG GCCATGGATG AGTCCAATGC TACCTGTGGG
AAGCGTTTGG CGTCAATTGG GCTAGAGAAT ACTGAAGCTA ACCGCCAGGC ATACCGTACC CTTCTTGTGA CAGTTCCAGG
CCTTGGTCAA TACATCTCTG GTGCCATTCT CTTTGAGGAA ACTCTCTACC AATCCACAAT TGATGGCAAG AAGATTGTTG
ATGTTCTCAT TGAGCAAAAC ATTGTTCCTG GTATTAAGGT CGACAAGGGT TTGGTTCCTC TTGTTGGCTC CAACGATGAG
TCATGGTGCC AAGGTTTGGA TGGTCTTGCC TCTCGCTCAG CTGCATACTA TCAGCAAGGT GCCCGTTTCG CCAAATGGCG
TACTGTTGTG AGTATCCCCA ACGGTCCCTC TGCTCTGGCT GTCAAGGAAG CAGCCTGGGG TCTGGCCCGC TATGCTGCAA
TTTCTCAGGA CAATGGATTG GTGCCAATTG TGGAGCCAGA AATCTTGCTT GATGGGGAGC ATAATATTCA TAGAACTTTT
GAAGTAGCCC AAAAGGTATG GGCAGAGGTG TTCTTCTACC TTGCTGAGAA CAATGTCCTT TTTGAGGGTA TTCTCCTGAA
GCCTAGCATG GTTACACCTG GAGCTGAATC AAAGGAGAAG GCAAGTCCTC AAACAGTAGC TGATTACACC CTCAAGCTCC
TTCACAGGAG AATCCCCCCT GCAGTCCCTG GAATTATGTT TTTGTCTGGT GGACAGTCTG AGGTTGAAGC TACCCTGAAT
TTGAATGCCA TGAACCAATC TCCAAACCCA TGGCACGTGT CATTCTCATA TGCCAGAGCC CTTCAAAACA CTGCCTTGAA
GACATGGGGA GGGCGCCCAG AGAATGTGAA GGCGTCACAA GATGCACTCC TTTTCCGTGC CAAGTCCAAC TCACTGGCTC
AGCTTGGAAA GTACACTGGT GAGGGTGAAT CTGAAGAGGC CAAGAAGGAG TTGTTCGTCA AAGGTTACTC CTACTAA

>Vigan.06G228800.01
MASASPSLLK SSLVLDKSEW VKGQSLRQPS ASVVRCSPTN PSALTIRAGS YAEELVKTAK TVASPGRGIL AMDESNATCG
KRLASIGLEN TEANRQAYRT LLVTVPGLGQ YISGAILFEE TLYQSTIDGK KIVDVLIEQN IVPGIKVDKG LVPLVGSNDE
SWCQGLDGLA SRSAAYYQQG ARFAKWRTVV SIPNGPSALA VKEAAWGLAR YAAISQDNGL VPIVEPEILL DGEHNIHRTF
EVAQKVWAEV FFYLAENNVL FEGILLKPSM VTPGAESKEK ASPQTVADYT LKLLHRRIPP AVPGIMFLSG GQSEVEATLN
LNAMNQSPNP WHVSFSYARA LQNTALKTWG GRPENVKASQ DALLFRAKSN SLAQLGKYTG EGESEEAKKE LFVKGYSY*