GBrowse Details

Vigan.11G175300.01

Basic Information:
Name: Vigan.11G175300.01
Multiple alignment
Variant Information
Position: Chr11:29014588..29021459 (+ strand)
Length: 6872
Functional Information:
Description: Similar to Uncharacterized protein. [I1J700, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Aldo/keto reductase (IPR001395)
Aldo/keto reductase, conserved site (IPR018170)
Aldo/keto reductase subgroup (IPR020471)
NADP-dependent oxidoreductase domain (IPR023210)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.24,14.12,17.47,25.91,43.08,22.38,0.27,50.46
Arabidopsis thaliana homolog: AT2G37770.2, AT2G37790.1
Automatic updates:
Name: NM_001253147 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aldo-keto reductase family 4 member C9-like (LOC100781137), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:29014588..29014700 (+ strand)
Length: 113
Type: five_prime_UTR
Position: Chr11:29014701..29014820 (+ strand)
Length: 120
Type: CDS
Position: Chr11:29019416..29019466 (+ strand)
Length: 51
Type: CDS
Position: Chr11:29019613..29019689 (+ strand)
Length: 77
Type: CDS
Position: Chr11:29019789..29019876 (+ strand)
Length: 88
Type: CDS
Position: Chr11:29020188..29020463 (+ strand)
Length: 276
Type: CDS
Position: Chr11:29020605..29020853 (+ strand)
Length: 249
Type: CDS
Position: Chr11:29021054..29021140 (+ strand)
Length: 87
Type: CDS
Position: Chr11:29021141..29021459 (+ strand)
Length: 319
Type: three_prime_UTR

>Vigan.11G175300.01 class=Sequence position=Chr11:29014588..29021459 (+ strand)
GACAGAAACA AACTCTATAA CAGACTCTGC CACCCACAGT GAGGCAAGAA AAGTCCATTC TCTTTTTCTA CATTTTTCAG
CGGCACCATT GAAGCTTTCG GTTTGCGAGA CAAATGTCGA ACGATATTCG ATTCTTCGAC CTCAACACGG GAGCCAAGAT
CCCTGCCATC GCCTTGGGAA CCTGGCAATC CGATCCCGGC GTTGTTGCTC AAGCCGTCGC TGCTGCCATC AAGGTTTTCT
CGTTACCATT TCGATTCTCC TTTCAATTTT GATTTGATTG GTTTTATTTT GATGATTGTT GATACTGACC GTTACGTTAC
GCTAACATGT ATTTGTTCAT GAGCGTGTGT GATCGTTTCA CTGTAATTGC ACTCCAAAAC TCTTGAGATG CGGATAAATG
TCACTAATGA TGTTTGGTCT CTCACAATGG TCATGATTGT AGAAGAATAA TGACTATGAT CATACATGCG CCGATGTGTT
TGAGCATTTT ATGATTGTTA TCGCATCGTG ATTGAGTAGT GGTTATTACC ACTTTCGTGA CCATTATATG TATACCCCAG
GACATCCATT TAAAATACCT TAATTAAGGA CGATCACTAC CACTATAGTC ATCGTTACAG TTGATGTCGT TGTTATTAGT
ATCGCAATGG GACGGTATGG TGGTGTGTGA ATTTCAGTAT ACCTCAGCTT TTTTTATTAG ATCGTTTGAA GTGAAAACGC
ATACCTATTA TTGTCTTGAA TATTTGATAC ATGGAAATTT GTGAAATGGT TGTTTCTGTA ATTGGGAGTA GTACACTTGT
ATCACTTTGA ACATTTACTA AATAATTATA TATATATATA TATAATACTA ATAAAAGTTT AAATTAAGAA TATTTTAATA
CTTTAAAACT GGTACAACAA CAAAATAGAT GTATAAATAC TTATTCTTAC TCTATACCTA ATATAAAAAA TTGAATATTA
CTTAAACTCT TATTTAATCA AATTCAAATA TTATTTAATA TTTAAAAAAG TTATCTTTAT GCATAAGTTT ATTTCTGAAG
GTGATGAAAT TATTGATGAC GACTATAATT ATAATTGTGC TGACAAATGT CTTGGTGATG ATCGTGAATA ATTGTGGCTG
GAAATCTTCT ATAAATTTGT TTTTTCTTTA GGGAAGTTAT ACTCATGATA TTTTAATATG AATTCTTACG TGTTAGTGTT
AGCTCTGTAT ATTACTTTTA GTACTTTGAA TTTTATTACT TGTTCTAGGA CAAAGTAAAT TGTTAATGTA CTTATTTTTT
TCTACTTAGA ATAAATTAAC AAGGTACAGT TTAGATGAAT TTTAATAAAG TCGTAACTAT AATTTCTTGT TAATATAGTT
GACTTAAAAT AAAATTAGGT GTGCAAACCT CACTAGCATT TGCCAACATA CCCTTGCTTT TTGGATAGAA TGAGAAAATT
TAAAACAAGA CAATCTGAAA TCGTAATCCA ACTCTGTCTA TGTATCTATG ATAACCTTAA CAGCTGATTT ATTCTAGTTA
TAAACAAATT TTATCATCTG AAGTGTATCA CTTGCTTTAT CGAGTCAAAT TCTATTATAG CACTGCCGAT ATAGTGTAGT
CCCGCCACAT AGTTATTAGC ATAAAACCTT GGATCAGACA GTTATATCGA GCAATTTTAT TAGTTTGCAC AATGCTTCTC
TTACTCGTTT GTATTCTTCA GCTCGATCTG CTCCTTCCTG GAAGTTTCTC TAAAGAAATT TGCATGATAG GGAATTCTCT
AAGTTCACTT TATGTGTTGC TGGTTTCAAT CTATCTTTCT TCTAATCCAT TTAAGAAGCT TTGAGTCTTT GGGTTTATAT
TTAGCGATCC TATTTTCAGT TTCTCAATGT CAACTGATAA TGCTTCTTTC TTTTTATATT AATCTTTGGA AATCGATTTC
TGACTCTATG GTTAAGTCAT ATTGTTCTTA ATGGAATTGA TTAGAGTGAT TTACTTCAAA TTCAAAGATT TCTATCTGCT
TTATATATTC AGATTGAGTT TTGAACATTG GGTTTCCCCC TAGGATCTCT AGTACTTCTG TGCGTTAATT TTAAAGGATT
TAGCGCTAGG AGAGAGATTC CTAAGATGTT TTATAGTTCT CAGTTTGCAG TATCTGATTG AAATGAAAAA TTAGAATTTT
TACTGAATTC CGTTTTTGTA ATGAATTCAA TAGCTTTTCT TGTAGAAATC GAGCTGGGAG GTATAATACC AATTTGTATT
ATCTGGGAAA TATACTCTTC ATTATGTATA TATATAAATT TTCTGGACAA ACTATCCAGA ACATACAAAT ACAAACACAA
CACATTAATC TCTCAAACTC ACAACATACA ACTCACAACA CACAACCCAT TTTCACTCTT TCTCTCACAA ACATGGAGAC
TCTCTCCTTT CTCACTGCCC ATTCTCCACG GTGCACACAC TACAAGTGTG TCACACGACC ACACCTTCCT CTGTATTTTC
TTTCTTCTCG GTGGTGGGTA TTTTACAACC ACTTCTTCAA TCACTTTTAT AAGTGAGTTA CAAACAAAAA TCCAAATAGT
GGTTAGTGAA GTGGATGGCT ACTTTCGGTG TAGTGTGGTA GTTACAATCA TCACAAACAA ACAAATAAAA CCGTGTGGAC
CCTTTTAAAG TTTACCCAAC AAAACTCCCC CGTAAACTTT AAATTGGTCT TCTTACACTA TATCCCATCA TCTCGATTTT
TTTCTTTTCT CCCAGATCTT CTGCTCCCTG TTCTCGATCT CTTCTCCCTG GATCGTCTAG GTCTTGAGTG TTCTGAATTC
CTCCTCTTCA AATCAAACTT TTCCCGAAGC ATTCGATCTA GTGGCTCAAA TCTCCGCTGC TGGTGCGTCT CTAGAACCCG
ATCAACCTCT TTACCCAAGA GCTTTGATAG GTCCTTCCAC TCCTCGATGA CGCACACAAA ACTTTCGAAA TCATCCGTTC
ATGATTTCAA ACTCTTCTCC ACAACTCGGC TGACAGGCAG CGACTCTCCA TTTCTGCCGA GTTGATCTGC CACTTTCTCC
TTCAAATTTT CAAACTTTGT CTTGCCTAAC ACAGTTGTCC CCTGCACGCG TCTATTGAAG ATGCCTCCTT TGCTATCTTC
TCACCGCTGG ACTTCTCTGT CCTTCACTCG CGTCTCTTGA AGATGCCTCC TTTGCTATCT TCTCACCGCT GGACTCCTCC
TCACAGGCGT CCTTTTCAAC TCAACAATAT GGGTCACAGA TTTGCTCTTC CTTCTCTGTG GGTACTCGTT TCCCACAATC
CACAACATCC CAAACACCGG GATCCAACAA AAGCTTTCAT CTGCAGACTC CAATCACCAT AGTTGACACA CTCTGTCAAC
TGAACTAGGG ACACTGTTAA CAAGATTAGT CATCTCTTAC TCTCTCTCTC TTTCTTTCGA ATACTCAAAC TCTCTCTCTT
TTTCACTATC CTTTTTTCGG ACACTCAAAG TTCTCCCAAT TAAATCAGCT ACATTTTTTT TTAACCCACA AGAATGAATT
CTCAGCACCT CTCGGCTCTC CTTCCCTTGT GCACACTGCC TTTCAAAATG AAAGATGGAT CCTTTTTTCT TTGGCCGTTC
TCATGTGCAT GTTTTTTTTA AAGATTTTTT TTTTTATAAC TTTCTTGAAT CCATCTTTTG TAGTGCTCCT GGACGCATGC
TAAAAATAAG GGGTGGCCCT CCACTTTTCT CAAAAGCTAC ATCTTTATTC TTTTGTCCTT CTCTTCCACA TTTTCCAAAA
CACATGGAGA GGCCCTCCAT TTCTTATTGC TCCTTTCAAA TGAATCCAAG TGAAACCCTC TCTCACGGGC TTCCTCTTCA
CCTCACGGCC CCCTCTTTTA TTCCCACACG GCTTTCCACT TCAAGTAAGG TATACACCCT TAAACAATGG GACCCATGCC
TTCTTCTTTT CTTCAATGGC CATGACCGAG AGCTATGCTC TCCTTCTTTG CTTGCTGCCG TGTGCACTTC TAAAACGCTG
CTGCTTCTTC TTTTCCCTGC TGTTTGGTGG CTGCTCCAAT ACGTTCCAGC CCCCTCTCTT TGCACACCAA CACACCAACT
CTCTTGGCTG CTGGACTTCA TGTGCGGAAG ACGCCATCAA CACGTTAGCC TCCAACGTCG TTGTCGCCCG CTCCAGCCCC
GGAACCAGCT TGCTCGCCTT CTCCATCTTC GGCACCAACC CCTGCGGAAA CGCCTTCGCC ACTTCCAGCG TCTCCCCCGG
CTCCTGCGGG AGACACTCCA GCTCCCTCTC CTCTTCAGTG GCGGCTCTCC CTCATACTCC TTTCTCTGCT GCTGTGTCCG
AGAGCTCCTG AAGTCACAGC GTGAGCACCT TCCAAAATGA AATCAGCGCC AGCCGTGACC TTCTCCTCTT CCATCCGTAG
CTCTGATACC AATTTGTAGA AATCGAGCTG GGAGGTATAA GTGAGTTGCA CACAATAATC CAAATAGTGG TTAGTGAAGT
GGATGGCTAC TTTCGGTGTA GTGTGGTAGT TACAATCATC ACAAACAAAC AAATAAAACC GTGTGGACCC TTTTAAAGTT
TACCCAACAT TTCTTGCTTC CTCGTGGTGT TCTACATGTG GTCCTTTTCT TAGTTTTCTA GTTTTGTTCC TTTAATCTTC
GGTCTTGATT TCTTTAGTTT TTGGGGACTT CTTGTACCTT TCTGTTCTAT CATAATAAAT TCTTTATTTA TCTAAATAAG
ATTATTATTC TCTGTTTTGC ACTCTGCAAC AACCAACTAG TTTCTCTTTC ACTATTTGAA AATCTGTGAT TCATTACAAG
GATCTTTGGT TTTATTAATT TGATGCAGAT TGGTTACCGC CACATCGATT GTGCTCACAT CTATGAGAAC GAGAAGGAGG
TAATTGTCAC CACTAGGCGT TTGTTCTTGC TCATTTGGTG TCATGTTATA TCGATTAAAC AGCACAACTA GCTATTTTCA
GTAAATGATT GAAAGTGATT GGTCATGCTA TGTGTGAAGG AAATGATTCA TTAAATCTGA TGCAGATTGG CTCTATGTTG
AAGAAGCTGT TTGAGGAGGG TGTAGTGAAG CGCGAGGATT TGTGGATTAC ATCTAAACTC TGGTTTGATT TTAGATTCTA
GACTAATCAG TTTAGTTCCG TTTTTAAGCT AAATTAATAG TCTTCACTGC TTATAACTCA AGGATTTAAG ATGATCTGTA
GGAATACTGA TCATGCTCCA GAAGATGTAC CGCTGGCATT GGACAGGACT TTGAAAGATT TGCAGCTTGA TTATGTAGAC
TTGTATCTTG TATGTAATAT CACTAAAGCT CACAATTTTC TCAACCTCTC TTGTTATTTA TAATCCACAT CTCTTAGTTC
TCTAATTATT GCAGCCCCAC AAAGTAACTC TAATTACTCT ACGAACTAAA TCTCCCTGAC TGTCAAAGCT AAATCTCGTA
AGCCTTAAAT AAGTAACTAA TGAGTATAAG TAAAAAACTA AATTAACATT TCTTGCACTG TTTAGCGGCT TTTGTTTTGT
TTTAGATTTT TGTTTTTTCA AAATTGGGTG CATTGATACT GATGATATAC ACAATTGAAA ACTCGGTTGT GTCTTTTCAG
ATCCACTGGC CAACTCCAAT GAAAAAAGGA ACACAAGGCT TTAATCCTGA AAATCTTGTG CAAGCAAACA TACCTAACAC
ATGGAAGGCA ATGGAAGCAC TCTTTGACTC TGGCAAGGCT CGGGCTATAG GCGTAAGCAA TTTTTCCACC AAAAAGCTGG
CAGATTTGCT GGAAGTTGCT CGTGTTCCTC CTGCTGTCAA CCAGGTGGAG TGTCATCCTT CATGGCAGCA AGAGAAGCTG
AGAGCTTTCT GCAAATCCAA AGGTGTCCAC CTCTCTGTAA GTTTATAACT CTAGACTCTA GAATTGTCTT CGCATTATGG
TCGCTATTTA TAAACCAGCC TGTTTGTTGT CATGAAACAT TATCTTGTAT CTAATTTTTC TTATTTCATC TGTGATCTTT
TTATCGTACA TGTTTAGGGA TATTCACCTT TGGGTTCCCC TGGAACACCC TGGCTTAAAA GTGACGTCCT TAAGCACCCA
GTTTTAAATA CGACTGCGAA GAAGCTAGGC AAAACTCCTG CACAAGTAGC TCTTCGCTGG GGACTTCAAA TGGGTCAAAG
TGTGCTTCCC AAGAGTACAA ACGAAGCACG GATAAAGGAG AATTTTGATA TTTTTGGCTG GTCTATCCCT GCGGACTTAC
TCGCTAAATT TTCTGAGATT CAGCAGGTAA CATTATTTAA TTGTCAACCT AGAGTAAGAG TTTATATCTG ATCCATCTAG
CAAATCCCTC TTTGTATTTT TTTTTTCTAT ATTTTTGCAA GCATGATATT TGGAATTTGT CAATTAATAA GTATGCCACT
TTGATCTGAA ATTCAGTTTG ATGGAAGCAT TGTCAAGTTT TATGACAGGG GTGGTTGTTC TTGCAGGCAA GATTACTGAG
GGGTACCACA TTCGTCCATG AAACTTGGGG TGCCTACAAA ACTGTCGAGG AATTATGGGA TGGTGAAATC TGAGCATCTG
CTATGTTTGT TCGATGGAGT GAATGGAACG TGGAGTAGGA GTTCGTCACT GTCTTTGGGT GTAGGGTTCT GAGAAACTCT
GAATAGGTGC ACTGTTCAAT TGTTGATTTT AGCAAATTAT ATTAAATTAC TGGTTGGATC AAACTTAGCA TCTTGACACT
CATTCATATT TCTCTTTGAT ATACAATTGA GTGATTTTCA TTAAGGATAC GTTTGCTACA GAATTAAGTA AAAAAAAATG
AAATAACAAT GAATAAAAAT CTTATATAAT TTAATTAATT GTTATTTTTA TTTAATAATC ATATATGACA AT

>Vigan.11G175300.01
GACAGAAACA AACTCTATAA CAGACTCTGC CACCCACAGT GAGGCAAGAA AAGTCCATTC TCTTTTTCTA CATTTTTCAG
CGGCACCATT GAAGCTTTCG GTTTGCGAGA CAAATGTCGA ACGATATTCG ATTCTTCGAC CTCAACACGG GAGCCAAGAT
CCCTGCCATC GCCTTGGGAA CCTGGCAATC CGATCCCGGC GTTGTTGCTC AAGCCGTCGC TGCTGCCATC AAGATTGGTT
ACCGCCACAT CGATTGTGCT CACATCTATG AGAACGAGAA GGAGATTGGC TCTATGTTGA AGAAGCTGTT TGAGGAGGGT
GTAGTGAAGC GCGAGGATTT GTGGATTACA TCTAAACTCT GGAATACTGA TCATGCTCCA GAAGATGTAC CGCTGGCATT
GGACAGGACT TTGAAAGATT TGCAGCTTGA TTATGTAGAC TTGTATCTTA TCCACTGGCC AACTCCAATG AAAAAAGGAA
CACAAGGCTT TAATCCTGAA AATCTTGTGC AAGCAAACAT ACCTAACACA TGGAAGGCAA TGGAAGCACT CTTTGACTCT
GGCAAGGCTC GGGCTATAGG CGTAAGCAAT TTTTCCACCA AAAAGCTGGC AGATTTGCTG GAAGTTGCTC GTGTTCCTCC
TGCTGTCAAC CAGGTGGAGT GTCATCCTTC ATGGCAGCAA GAGAAGCTGA GAGCTTTCTG CAAATCCAAA GGTGTCCACC
TCTCTGGATA TTCACCTTTG GGTTCCCCTG GAACACCCTG GCTTAAAAGT GACGTCCTTA AGCACCCAGT TTTAAATACG
ACTGCGAAGA AGCTAGGCAA AACTCCTGCA CAAGTAGCTC TTCGCTGGGG ACTTCAAATG GGTCAAAGTG TGCTTCCCAA
GAGTACAAAC GAAGCACGGA TAAAGGAGAA TTTTGATATT TTTGGCTGGT CTATCCCTGC GGACTTACTC GCTAAATTTT
CTGAGATTCA GCAGGCAAGA TTACTGAGGG GTACCACATT CGTCCATGAA ACTTGGGGTG CCTACAAAAC TGTCGAGGAA
TTATGGGATG GTGAAATCTG AGCATCTGCT ATGTTTGTTC GATGGAGTGA ATGGAACGTG GAGTAGGAGT TCGTCACTGT
CTTTGGGTGT AGGGTTCTGA GAAACTCTGA ATAGGTGCAC TGTTCAATTG TTGATTTTAG CAAATTATAT TAAATTACTG
GTTGGATCAA ACTTAGCATC TTGACACTCA TTCATATTTC TCTTTGATAT ACAATTGAGT GATTTTCATT AAGGATACGT
TTGCTACAGA ATTAAGTAAA AAAAAATGAA ATAACAATGA ATAAAAATCT TATATAATTT AATTAATTGT TATTTTTATT
TAATAATCAT ATATGACAAT 

>Vigan.11G175300.01
ATGTCGAACG ATATTCGATT CTTCGACCTC AACACGGGAG CCAAGATCCC TGCCATCGCC TTGGGAACCT GGCAATCCGA
TCCCGGCGTT GTTGCTCAAG CCGTCGCTGC TGCCATCAAG ATTGGTTACC GCCACATCGA TTGTGCTCAC ATCTATGAGA
ACGAGAAGGA GATTGGCTCT ATGTTGAAGA AGCTGTTTGA GGAGGGTGTA GTGAAGCGCG AGGATTTGTG GATTACATCT
AAACTCTGGA ATACTGATCA TGCTCCAGAA GATGTACCGC TGGCATTGGA CAGGACTTTG AAAGATTTGC AGCTTGATTA
TGTAGACTTG TATCTTATCC ACTGGCCAAC TCCAATGAAA AAAGGAACAC AAGGCTTTAA TCCTGAAAAT CTTGTGCAAG
CAAACATACC TAACACATGG AAGGCAATGG AAGCACTCTT TGACTCTGGC AAGGCTCGGG CTATAGGCGT AAGCAATTTT
TCCACCAAAA AGCTGGCAGA TTTGCTGGAA GTTGCTCGTG TTCCTCCTGC TGTCAACCAG GTGGAGTGTC ATCCTTCATG
GCAGCAAGAG AAGCTGAGAG CTTTCTGCAA ATCCAAAGGT GTCCACCTCT CTGGATATTC ACCTTTGGGT TCCCCTGGAA
CACCCTGGCT TAAAAGTGAC GTCCTTAAGC ACCCAGTTTT AAATACGACT GCGAAGAAGC TAGGCAAAAC TCCTGCACAA
GTAGCTCTTC GCTGGGGACT TCAAATGGGT CAAAGTGTGC TTCCCAAGAG TACAAACGAA GCACGGATAA AGGAGAATTT
TGATATTTTT GGCTGGTCTA TCCCTGCGGA CTTACTCGCT AAATTTTCTG AGATTCAGCA GGCAAGATTA CTGAGGGGTA
CCACATTCGT CCATGAAACT TGGGGTGCCT ACAAAACTGT CGAGGAATTA TGGGATGGTG AAATCTGA

>Vigan.11G175300.01
MSNDIRFFDL NTGAKIPAIA LGTWQSDPGV VAQAVAAAIK IGYRHIDCAH IYENEKEIGS MLKKLFEEGV VKREDLWITS
KLWNTDHAPE DVPLALDRTL KDLQLDYVDL YLIHWPTPMK KGTQGFNPEN LVQANIPNTW KAMEALFDSG KARAIGVSNF
STKKLADLLE VARVPPAVNQ VECHPSWQQE KLRAFCKSKG VHLSGYSPLG SPGTPWLKSD VLKHPVLNTT AKKLGKTPAQ
VALRWGLQMG QSVLPKSTNE ARIKENFDIF GWSIPADLLA KFSEIQQARL LRGTTFVHET WGAYKTVEEL WDGEI*