GBrowse Details

Vigan.11G071400.01

Basic Information:
Name: Vigan.11G071400.01
Multiple alignment
Variant Information
Position: Chr11:8262088..8264670 (+ strand)
Length: 2583
Functional Information:
Description: Similar to Uncharacterized protein. [I1LWZ5, Glycine max]
InterPro: PMR5 N-terminal domain (IPR025846)
PC-Esterase (IPR026057)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.02,0.29,11.24,2.74,0.01,33.20,6.16,15.78
Automatic updates:
Name: NM_001317676 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein trichome birefringence-like 19 (LOC100777436), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:8262088..8262786 (+ strand)
Length: 699
Type: five_prime_UTR
Position: Chr11:8262787..8263260 (+ strand)
Length: 474
Type: CDS
Position: Chr11:8263591..8264400 (+ strand)
Length: 810
Type: CDS
Position: Chr11:8264401..8264670 (+ strand)
Length: 270
Type: three_prime_UTR

>Vigan.11G071400.01 class=Sequence position=Chr11:8262088..8264670 (+ strand)
ATTGTAAGGT CCCATTGTTC TCTGTTTTTA TAATAATGGT AATCTTTTCT TACCAGTTTT AGCTTGGGTT CTGTAACTTT
CAGAGGAACT GACAAACGGT AGTAAACAAT GAGAGCACAA GGGGCTATTA TATTCTTGGA TTCCCTTTGA TTTATTTTAT
TTTTCATTTT TGTAGTTTTT GACATGTTTT ATTAGTCAGA CATAGTTGTT TATGAATTGG CTAGCATCCT CAAAGGTTCT
TTGTCCTTGT GTGTACATTT TAAAAGATGT GCATTAGCAA GAACAAGGAC TATTGTTTAT GCAAATCTAG AAGCAGAACA
AAGCCAGAGT GTTCTATGGC CACTAGTTTA AGAAAGAAGC AATTGAAAAC TTGTACAATA AAGCATTCAA GGTGAGCATA
GAAAAAAACA GTGGAACATC ACTTTTTCAT TTTTTCTCTT ATTTTCTTGT TTGTTTTTTT TCCTCCATCT ATCTATGTAC
ACGTCAAATT ATCATTAATG AATAATGACA CTATAACTAG ACTTAGACAT ATCACGAATT GGTGAAGTTG AATTAGATAT
AATAAGGCAT TCCTTGAGAG AAAGTTCAGT TTAGAACTGA ATTAAAACTT GAAAGGTTTA TCCTAACCAA AGATTGGAAG
AAAGTTCATA TTTATATGAG CCATTCAGCG AAGGTTTTGA TTCAGAATAT AACTCAGCAA TGACAATGAA GGCTCGGGGC
AATGAGGTTT TCAATGGGAA GTACACAGCA AGAACCACAG CCAAAAGCTT TCTCCTGGTA CCCTTCACTC TTCTTCTCAT
CATGCTCCCT CTTTCTCTCA TGAGGAACTC TCACGAATCA ACTCCTGAGG TGTCTTCTGC AACTGTCAGC AGCAGTTTGA
ACAACACAGA AATTAAACAC TGTGACATCT TTTCTGGGAG ATGGATGCAT ACTTCCAGAC CACCTTACTA CACCAATGAA
ACATGCCACT GGATTATTGA CCAGCAAAAT TGCATCAAGT TTGGGAGACC CGATAGAGAG TACCTGCATT GGAGGTGGAA
GCCTGATGAA TGTGAGCTTC CTCTCTTCAA TGCAACTCAA TTCTTGAATC TTCTCAGAGG AAAGAAAATG GTTTTTGTTG
GAGACTCGGT GGGGAGAAAC CAGATGCAGT CTTTGTTGTG CCTCCTAAGT CATGTAAGTG AGAAACTCCC ACCTTTTTTC
TAGCTTTTCC AAGAGAATAG AAGCTGAAAG TGTTTGTCAT ATAGTTCCAT CCTTGCATTA TACAACTCAA TCTACCCTTT
TGTCTCAATT TTTGAGAATC ATCAACTAGT TGTGTTTCTG GTAGAAAACT TTGTTAATGA GTTTGCTGCA TGATTATGTT
TCAAGGTTTT GAATTATGGA ATTCTGATTG CAAACTGTGT TCTAAAACCT TGGTTATGTT AGAAAGTTCT AAGCAATCAT
AAAACATGCT TATGATGCTA GTGTGATTTG TGGTTTAAAC TTGTTTGAAA TATGATTTTT CAGGTATCTG AACCTGAGGA
TGCTTCTCAC AAATATTCTT CAGATGTCAT GTACTTCAAA CGGTATATCT ATCACGAGTA CAACTTCACC CTTGGAAATC
TGTGGTCTCC ATATTTTGTG AGATCCAGTG ATGCTGACCC AAAAGGGCAT TCCTTCAACA GCATAATGAG ACTGTATGTG
GATGAGGCAG ATGAAGCATG GACCAGTGAG GTTGAGAAGT TTGACATTGT GATAATCTCA TCAGGGCAAT GGTTTTTCAG
GCCTCTGCTG TTCTATGAAG AGGGTAAGCT TGTGGGATGC AACAAGTGTG GGATGGAGAA TGTGACAGAC CTGACACACC
TCTTTGGATA CAGGAAGGCA TTCAGGACAG CATTTAGGGC ACTGAATGAT CTAGAAGGGT ACAAGGGGGT GACATTTTTT
AGGACATTCT CCCCAGCACA CTTTGAGAAT GGGGATTGGA ACAAGGGAGG GAAGTGTGTG AGGACTAGGC CATTCAGCAA
ACAAGAAATG AAGCTTGATG GATACATTCT AGACATGTAT ATGACACAAG TGGAGGAGTT TGTAGAAGCA CAAAGGGTAG
CAAAAGAGAG GGGGTTGAAT TTTGTGATGA TGAACACAAC TGAGATTATG CTTCTTAGGC CTGATGGACA TCCCAACAAC
TATGGACATT CTCAGGACAA AAATGTGACA CTGAATGACT GTGTTCACTG GTGTTTGCCA GGGCCAGTTG ATACTTGGAA
TGAGTTTTTG CTGCATATGT TGGATGTAGA AAGTAAGGGA TATTATAGTT CAAAGCTGGA GAGAGTTTTT TAAGAGCTTT
GGATTTAGCA TGTGGAAGAT ATTGTTAACC ATGTGGAGAT ACTTTTTGTT GTTTTGTTTT TGGGTTCAGA GAAGTATATT
GTATTTATGT TTTGTAGATC ATATAGAATG TATATCCAAA AGGTATTTGT GGACACAAAT TGTCTTCATT AGCTGTCATG
CATTATGATA AAATGGGCAA TATTCATTCA TGCCCAAGAA CTTCAAATGT ATCACAATAA TTGCAAGTAA GAAAGTAAGA
AAGGCTCTTC TGACTTCACT ACA

>Vigan.11G071400.01
ATTGTAAGGT CCCATTGTTC TCTGTTTTTA TAATAATGGT AATCTTTTCT TACCAGTTTT AGCTTGGGTT CTGTAACTTT
CAGAGGAACT GACAAACGGT AGTAAACAAT GAGAGCACAA GGGGCTATTA TATTCTTGGA TTCCCTTTGA TTTATTTTAT
TTTTCATTTT TGTAGTTTTT GACATGTTTT ATTAGTCAGA CATAGTTGTT TATGAATTGG CTAGCATCCT CAAAGGTTCT
TTGTCCTTGT GTGTACATTT TAAAAGATGT GCATTAGCAA GAACAAGGAC TATTGTTTAT GCAAATCTAG AAGCAGAACA
AAGCCAGAGT GTTCTATGGC CACTAGTTTA AGAAAGAAGC AATTGAAAAC TTGTACAATA AAGCATTCAA GGTGAGCATA
GAAAAAAACA GTGGAACATC ACTTTTTCAT TTTTTCTCTT ATTTTCTTGT TTGTTTTTTT TCCTCCATCT ATCTATGTAC
ACGTCAAATT ATCATTAATG AATAATGACA CTATAACTAG ACTTAGACAT ATCACGAATT GGTGAAGTTG AATTAGATAT
AATAAGGCAT TCCTTGAGAG AAAGTTCAGT TTAGAACTGA ATTAAAACTT GAAAGGTTTA TCCTAACCAA AGATTGGAAG
AAAGTTCATA TTTATATGAG CCATTCAGCG AAGGTTTTGA TTCAGAATAT AACTCAGCAA TGACAATGAA GGCTCGGGGC
AATGAGGTTT TCAATGGGAA GTACACAGCA AGAACCACAG CCAAAAGCTT TCTCCTGGTA CCCTTCACTC TTCTTCTCAT
CATGCTCCCT CTTTCTCTCA TGAGGAACTC TCACGAATCA ACTCCTGAGG TGTCTTCTGC AACTGTCAGC AGCAGTTTGA
ACAACACAGA AATTAAACAC TGTGACATCT TTTCTGGGAG ATGGATGCAT ACTTCCAGAC CACCTTACTA CACCAATGAA
ACATGCCACT GGATTATTGA CCAGCAAAAT TGCATCAAGT TTGGGAGACC CGATAGAGAG TACCTGCATT GGAGGTGGAA
GCCTGATGAA TGTGAGCTTC CTCTCTTCAA TGCAACTCAA TTCTTGAATC TTCTCAGAGG AAAGAAAATG GTTTTTGTTG
GAGACTCGGT GGGGAGAAAC CAGATGCAGT CTTTGTTGTG CCTCCTAAGT CATGTATCTG AACCTGAGGA TGCTTCTCAC
AAATATTCTT CAGATGTCAT GTACTTCAAA CGGTATATCT ATCACGAGTA CAACTTCACC CTTGGAAATC TGTGGTCTCC
ATATTTTGTG AGATCCAGTG ATGCTGACCC AAAAGGGCAT TCCTTCAACA GCATAATGAG ACTGTATGTG GATGAGGCAG
ATGAAGCATG GACCAGTGAG GTTGAGAAGT TTGACATTGT GATAATCTCA TCAGGGCAAT GGTTTTTCAG GCCTCTGCTG
TTCTATGAAG AGGGTAAGCT TGTGGGATGC AACAAGTGTG GGATGGAGAA TGTGACAGAC CTGACACACC TCTTTGGATA
CAGGAAGGCA TTCAGGACAG CATTTAGGGC ACTGAATGAT CTAGAAGGGT ACAAGGGGGT GACATTTTTT AGGACATTCT
CCCCAGCACA CTTTGAGAAT GGGGATTGGA ACAAGGGAGG GAAGTGTGTG AGGACTAGGC CATTCAGCAA ACAAGAAATG
AAGCTTGATG GATACATTCT AGACATGTAT ATGACACAAG TGGAGGAGTT TGTAGAAGCA CAAAGGGTAG CAAAAGAGAG
GGGGTTGAAT TTTGTGATGA TGAACACAAC TGAGATTATG CTTCTTAGGC CTGATGGACA TCCCAACAAC TATGGACATT
CTCAGGACAA AAATGTGACA CTGAATGACT GTGTTCACTG GTGTTTGCCA GGGCCAGTTG ATACTTGGAA TGAGTTTTTG
CTGCATATGT TGGATGTAGA AAGTAAGGGA TATTATAGTT CAAAGCTGGA GAGAGTTTTT TAAGAGCTTT GGATTTAGCA
TGTGGAAGAT ATTGTTAACC ATGTGGAGAT ACTTTTTGTT GTTTTGTTTT TGGGTTCAGA GAAGTATATT GTATTTATGT
TTTGTAGATC ATATAGAATG TATATCCAAA AGGTATTTGT GGACACAAAT TGTCTTCATT AGCTGTCATG CATTATGATA
AAATGGGCAA TATTCATTCA TGCCCAAGAA CTTCAAATGT ATCACAATAA TTGCAAGTAA GAAAGTAAGA AAGGCTCTTC
TGACTTCACT ACA

>Vigan.11G071400.01
ATGACAATGA AGGCTCGGGG CAATGAGGTT TTCAATGGGA AGTACACAGC AAGAACCACA GCCAAAAGCT TTCTCCTGGT
ACCCTTCACT CTTCTTCTCA TCATGCTCCC TCTTTCTCTC ATGAGGAACT CTCACGAATC AACTCCTGAG GTGTCTTCTG
CAACTGTCAG CAGCAGTTTG AACAACACAG AAATTAAACA CTGTGACATC TTTTCTGGGA GATGGATGCA TACTTCCAGA
CCACCTTACT ACACCAATGA AACATGCCAC TGGATTATTG ACCAGCAAAA TTGCATCAAG TTTGGGAGAC CCGATAGAGA
GTACCTGCAT TGGAGGTGGA AGCCTGATGA ATGTGAGCTT CCTCTCTTCA ATGCAACTCA ATTCTTGAAT CTTCTCAGAG
GAAAGAAAAT GGTTTTTGTT GGAGACTCGG TGGGGAGAAA CCAGATGCAG TCTTTGTTGT GCCTCCTAAG TCATGTATCT
GAACCTGAGG ATGCTTCTCA CAAATATTCT TCAGATGTCA TGTACTTCAA ACGGTATATC TATCACGAGT ACAACTTCAC
CCTTGGAAAT CTGTGGTCTC CATATTTTGT GAGATCCAGT GATGCTGACC CAAAAGGGCA TTCCTTCAAC AGCATAATGA
GACTGTATGT GGATGAGGCA GATGAAGCAT GGACCAGTGA GGTTGAGAAG TTTGACATTG TGATAATCTC ATCAGGGCAA
TGGTTTTTCA GGCCTCTGCT GTTCTATGAA GAGGGTAAGC TTGTGGGATG CAACAAGTGT GGGATGGAGA ATGTGACAGA
CCTGACACAC CTCTTTGGAT ACAGGAAGGC ATTCAGGACA GCATTTAGGG CACTGAATGA TCTAGAAGGG TACAAGGGGG
TGACATTTTT TAGGACATTC TCCCCAGCAC ACTTTGAGAA TGGGGATTGG AACAAGGGAG GGAAGTGTGT GAGGACTAGG
CCATTCAGCA AACAAGAAAT GAAGCTTGAT GGATACATTC TAGACATGTA TATGACACAA GTGGAGGAGT TTGTAGAAGC
ACAAAGGGTA GCAAAAGAGA GGGGGTTGAA TTTTGTGATG ATGAACACAA CTGAGATTAT GCTTCTTAGG CCTGATGGAC
ATCCCAACAA CTATGGACAT TCTCAGGACA AAAATGTGAC ACTGAATGAC TGTGTTCACT GGTGTTTGCC AGGGCCAGTT
GATACTTGGA ATGAGTTTTT GCTGCATATG TTGGATGTAG AAAGTAAGGG ATATTATAGT TCAAAGCTGG AGAGAGTTTT
TTAA

>Vigan.11G071400.01
MTMKARGNEV FNGKYTARTT AKSFLLVPFT LLLIMLPLSL MRNSHESTPE VSSATVSSSL NNTEIKHCDI FSGRWMHTSR
PPYYTNETCH WIIDQQNCIK FGRPDREYLH WRWKPDECEL PLFNATQFLN LLRGKKMVFV GDSVGRNQMQ SLLCLLSHVS
EPEDASHKYS SDVMYFKRYI YHEYNFTLGN LWSPYFVRSS DADPKGHSFN SIMRLYVDEA DEAWTSEVEK FDIVIISSGQ
WFFRPLLFYE EGKLVGCNKC GMENVTDLTH LFGYRKAFRT AFRALNDLEG YKGVTFFRTF SPAHFENGDW NKGGKCVRTR
PFSKQEMKLD GYILDMYMTQ VEEFVEAQRV AKERGLNFVM MNTTEIMLLR PDGHPNNYGH SQDKNVTLND CVHWCLPGPV
DTWNEFLLHM LDVESKGYYS SKLERVF*