GBrowse Details

Vigan.10G215200.01

Basic Information:
Name: Vigan.10G215200.01
Multiple alignment
Variant Information
Position: Chr10:26409027..26414564 (+ strand)
Length: 5538
Functional Information:
Description: Similar to Glutathione peroxidase. [V7CM99, Phaseolus vulgaris]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: glutathione peroxidase activity (GO:0004602)
InterPro: Glutathione peroxidase (IPR000889)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.10,2.46,45.46,21.03,50.00,224.56,79.04,29.61
Arabidopsis thaliana homolog: AT1G63460.1
Automatic updates:
Name: NM_001250703 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527034 (LOC100527034), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:26409027..26409105 (+ strand)
Length: 79
Type: five_prime_UTR
Position: Chr10:26409106..26409159 (+ strand)
Length: 54
Type: CDS
Position: Chr10:26409826..26409902 (+ strand)
Length: 77
Type: CDS
Position: Chr10:26410086..26410147 (+ strand)
Length: 62
Type: CDS
Position: Chr10:26413525..26413643 (+ strand)
Length: 119
Type: CDS
Position: Chr10:26414042..26414209 (+ strand)
Length: 168
Type: CDS
Position: Chr10:26414299..26414331 (+ strand)
Length: 33
Type: CDS
Position: Chr10:26414332..26414564 (+ strand)
Length: 233
Type: three_prime_UTR

>Vigan.10G215200.01 class=Sequence position=Chr10:26409027..26414564 (+ strand)
CAAAATCGAA GAGTTGGTGT GTTGCTCTTC ATTCTAACGT GTCTCTTCAG TTCCTCTTCT TACAGTACAT ACAGACACCA
TGTCCACCGG TTCCTCCAAG GATCCAAAAT CCGTGTACGA TTTCTCTGTT AAGGTTCGTC TTCTTACTTC ATCTCCGTCT
GTGCATTGAG CTTCTTTGGA TAAACTAGCA CTGTTGCCTA TTTTTTTGAA AGTGGAATAG TTTTTTTCCC CTTCTTTATC
AATATTACAG TCTGAACATG CAATAAGTAA ATGTTTCTCA AGTGCAAAAC GTAAGAAGCA TTAAATCATT TTCTCCAAAA
CAAGTCTAAC CAAACATGCA TTCACCAAAC GATCATTAGT AAAACAATCT CTTACAAAGA AAGATTATTA ACATAGTCTC
CCAAATAGAT TTAAGTGCTT TGAGAAATTA GTAAAAAATA AGTCTCCTTC AAGAATATCC TGGGCTTCTC TAGAAAAGGA
GTTAGTAGTC CATGCGCTTG AAGATCAAGA GTGTTTAGAT GAAAAATTAT TTTTGAAGCG AGTGATTCAT GATTATTAGA
TACTTCTCTA TTTAAGAAAA AATGATACTG ACAGAACTGT GTATTTTTTT ATTCTATTTA ACACAAAAAC CGTTTATATT
TTCTTCTACT CTATTATTTT TAGACCTAGA TATAATCCCT TGAAGAATAT TTTATCTGAA ATCTCGTAAG CTGAGGTGTT
TATGTATAGC TTGAGAACAC AAATATCATC TGCATGTGAT AACTATAATT CCTGTTACAA TTCTTCCATT CATTTGCAGG
ATGCTAAGGG AGATGTGGTA GATCTCTCCA CTTACGAGGG AAAAGTCCTG CTGATTATCA ATGTTGCTTC TAAATGGTAT
CCTTAGTTTG TGTGACGTTT ACTTTTTGTT TCTTTTTTAC GTCAATTTTG CTTCTATTAA TTTAGAGCCT TGAAATTTCA
GCAGATTCTA TTTTCTACTT GTCAATAACT ATTCATACAG GTAATCGTAT AAATGTTGAG TATATTTACA ATTCTAGTTT
GCTTTTCTGA TTGAGACAGC GGCTTGACCA ACTCCAACTA TACGGAGCTG AATGAATTAT ATGCGAAGTA TAAAGACGAA
GGTTTGTATT GTATTAGACC CTTAGTGTTT CTTTTCTTAT TTGTCATTTC CAACTGTAAC TATTATAAAG TAGCCTTAGG
ATAAGCAATC TATGAATACA TATTAGTCGA ATAATGGTGA ATGGAAAATA TGTTTTCTCT TGTCGTGGGA TGCCTCTCTT
CACGTGAGAT GATTTAGGTT TTTCTTGGTG TTCTTGTTCG GTCAGCCTTA TGCAGCCGCC ATGTTTTTTA TATCCTTCCC
ACATCAGTTC GTGGCTAACA AGGATATTCA GGGGGCAAGA ACACACATAC AGGCTTCAGG AATGAACAAA ACAAAGGTGA
GATGGAGATT CATATTGAGC AACAGGAGGG GACTTGTGTG GAATGGTCCT TATGTCCGGT TGGGAGGTTC CTAATAGATA
AACCCGTAAG AGCACAAATA AACCCATAAT AGACTCTCGA GTAGGCAGAG TCAAATCGCT AAAACTTACT GTGGGAAATT
GAGTGTTCAA CAATAATAGT TATGGTTATG TGTTGAGGTA CTTTAGTGGT AGGATATGTA TAATGATATC TTAACCAAAC
CCTTCTGACT CAAGGAATTC AAAAAAGCAT TGGAGGTTCC TAATAGATAA ACCCGTAAGA GCACAAATAA ACCCATAATA
GACTCTCAAG TAGGCAGAGT CAAATCGCTA AAACTTACTG TGGGAAATTG AGTGTTCAAC AATAATAGTT ATGGTTCTGT
GTTGAGGTAC TTTAGTGGTA GGATATGTAT AATGATATCT TAACCAAACC CTTCTGACTC AAGGAATTCA AAAAAGCATT
GTTCTACAAA AAGCTCCAGA CCCTAGTGGG TTAAACCCAG CTTTCTACAA AATATTTTGG GATATATATG TTGTTTGTTG
ACATTTACCA AGCCAGTCTG AAATGGTTAG AAAAGGGCTC CCCCTCCCAA CACCAACATT TCCTTGTTCC AAAGAAAGAG
AACCCCTTGT TTATGAAGGA TTTGGGCCGA TATGCCTGCA ACATTTTGTA CAGGTTTATT GCCAAAGTCT TGGCCAATAG
GTCTAAACCT TTTTTCATTA ACTGCATAGA TCCTGAGCAG CTTGCATTTG GTTAAGTTTG TGATATCATG AATAATACTA
TGGAGGACTT TAAGGTTGTA CACCATATGA GTTGCAATAG GAGGGGGAAG ATTGGTGAAA TAGCTCTCAT GCTTGTCTTA
AATAAAGTCA ATGATAGTAT GGAATGAATT ACATCAAAGG TATGCACATG GAGTCTATCA TGTTCTTTAT CCATATTAAT
AAAGAGGGGA TGGGTCTTGT TGAGTGTTGT ATCAATTATT CTGTAGAGTA GGTAAGGTAG GTCAAGTCAC AATTGAAGAG
TTTAAATTTT GCAAGACAAT TATTGAGGGA GAGATGGTTG CAAGTTGCAT CAATTGTCCA GTGACAAAGG TTACATGGAG
CATGCCACAA TAGGAAAGGT TGTGCTCTAA CTATTAACTA TAATTTTTGA AATAATCTTA AGCATTTGAT TCAACAATTG
GTATCAAAGT CAAAGTCACG AGTTCGAGTG GGCAATTGTT AAGTAGAAGA TTGTTGCAAG TTGCATCACT TATCCTATAG
CATAGAGCAA GTTGATCAAG TTGCAATCAA AGAGTTTGAT TCCTAATAGG ACAATTGTTG AGGAAGAGAT TGTTGCAAGA
AACAAGGGGA TTGGATAAAA ATGAGAAAGA TAAGCATTAT GAAAGAAGAA AGAGTCACAA ACTCATTGTT TTAAGGTTTT
AGATTAAGGG TGATGTTGTA TGGGTTTATC CATGACTCAT TGGTGCCAAA TCTCCTTGAG TGTCTCCTTG AACAACCCAC
AAGTGGTATT ATAACTATTA GTTTGTCGTT GTTATCGGCT GAGACAAGTA CGATATGTGG TGAGTGAAAA ATCCTAGGTT
TGTAAATTCC TTGTATCAGA AAGTTTTTCT AATAGTAATT TCAAAAAAGT GTTGTTTAGG ACAGGTCATT AACATGGCAA
AATAGGAGAT TTTCTATAGA ACTAACACAA GCATGCAAAC TATACAGCCC ATTAACACTC TCCTCGGAGT CTTAGTGTTT
GGGCACAAGA AAGTACTTGG GCTTTGTCGT CTATGATTGA GAGGATGAAG GTTGTGTTCA GCTTCCATAG AGATGAGGTG
TTGAAGAAGG TTAATTATTG GGCAAGAAAG CCTTTATGCT ACGCTTGTTA AGTTTGTGGC CTAAGCAATC TTGGCAGCAC
TTTTTTGCTA CCTGCATCCT TAGTCTAAAG ATGCATTGGA CGATTAACTC TTTTTGTTGT GAGAAAATAA TACAAAGGAA
TGGGTTTGCG ATATATTCAC AACTTTAATC TAGCCATGCT GTGGCAGCAA GGTTGGAAAT TATCTTCCGG TCATGATGCT
ATTACATCAG GAGTTCTGAA AGCTAAATAC TACCCAAAAG GGGTCTTCTT AGAGGTAGCT TAGCTTTAGG CCATAAGACA
AACTATATTT GGCTTAGCAT CCATGCTTCT CAGATGGTGG TTAGAGGAGG TTTGAAATGG AGAATTGGAA ATGTCCCAGG
GCTAAATGTT TGGAAATTCT TTGGCACATG GCAAACCTCT GTGAATCTGC TTTCATGGAC AGGAAACATA ATCGCTAGGA
CCTGAACTTA GTTTTAATAT GATGAAGAGA GGAAATTTTG AAGATTCCAG TTTGTCTAGA AATTCAGGCT GATGTGCTTA
TTTTCTGTGA AACTCACCTA TTATTACATC ACAGTCCGTG TTTGGCTTAA TCCAATTCAG TATGCCATGA GATTGGGATA
AACTTTGGCA CGTACACATC CTACAGAAGG TGAGGATTTT CCTGTGGCAT GCCGCGAGAG ACTCTAAGTT AAAGGAGTTC
TATGCTGCTT TTGCCAAAAC AACCTTGAGA ACACATGGCA CTGCTTTTTG GGCAGCACCC ATGTATAGAA CTTCTGGGTA
CAAGCACGTC TGTGGAATAG CATTTTGGGT CCTGTTGAAA ATGTGGTAGG ATTTGCTGAT TACACCATGT GCTACTATGA
GGAAGGTGGC CACGCTCTTA TGGCCCATAT ATTGGAAAAG GAATTGCAAA ATCTAGGAGG ATAAAACATG CACACGTGGG
GCTGTTATTC AAAATGCAAT TGAGTAGGAA CCATTGCATC CTATTATTGT AATTGCTGCT TTTTTAAATA GCGTAAATTG
ATCAAATACT TCATTATCTC TTCGTGCTGA TAATTTTCCA GCTTGGAAAA ATTTGTGTTA GGGAGGAACC CTGTTTTGGG
CAATGTTTCT GTGATACATT GCTCTGATTA TCTTTGTTTC TCTTGTCTTG TAAATAAATT TAACTAATGC AATTGACTGG
GTTGTTGAAC TTACATAGGC TTGGAGATTC TGGCATTTCC ATGTAACCAA TTTGGAGAAC AAGAACCAGA AAGCAATGAT
AAAATTGTGG ACTTTGTCTG CACTCGTTTC AAATCTGAAT TCCCCATCTT TGATAAGGTT GGTCCACATG CATGAACTAT
TATTTTTAAG CATCCAATTC GCCAAAATTG TGTTATGATG TTTCCAAATA AAGAAAGAAA CCTTTATATA TATTTTCAGT
ATTTTTAGAC TTGTAGCTAA AGATCTACTC TAAAGTCTAG ACTAAATCTA TGATCTGTGT CATCGTTGGC TTTATATTTT
TTGCTTTCAT CCTAATCCCT CGTTATGCTT TCTATGGAAA AGATTCTATT AATGATATTC AACTGCTTCA GGCTATTTTT
CTAGTAACTT AAATTCTGCA CCTTGACTAG TTTCTTGTAC AAAAGTATAT ATGATTACTG CTATTTATCT AAATTTTGCT
GAGAACCGTG GCATGCACTG ATATTATATA CCTCTTTCAT TCGTTTTATT GCTAGATTGA AGTGAATGGG GGTAATTCAG
CTCCTCTGTA TAAATTCTTG AAGTCCGGCA AATGGGGTAT TTTTGGTGAT GATATTCAGT GGAACTTTGC CAAGTTTGTG
GTTGATAAGA AGGGACAAGT AGTGGGTCGC TATTATCCCA CGACTTCTCC TCTCAGCCTT GAGGTCAGGA CTAAATTATT
CTTTAAATTA CTTCATATGC TTTGTGCTGC TTCTGTTGTA ATTCTCTGGC CATCTTTTAA ATTGTAATGC AGAGAGACAT
CCGTCAACTT CTGGGTATTT CGTGAAGGCA ACTGGGAAGA GAGGATATGG CGAATGTGTT GTCTTCCTCA GTTTCTTAAC
AGCTTTGTCT CGAGGCAATG TTATGCAATA AGCACCTTGT CATACAATGG CTTCCTCCTT TACTTTCTTG TTTCCTTTTT
AACTTCATTT CTATCATAAA CCATACTTCT CTTCAGTTTT TTTAACCCTC GGTCTTCCTT AGTTATAAAT GTTTCACCTA
TGGAAGTTTC AATTTTTG

>Vigan.10G215200.01
CAAAATCGAA GAGTTGGTGT GTTGCTCTTC ATTCTAACGT GTCTCTTCAG TTCCTCTTCT TACAGTACAT ACAGACACCA
TGTCCACCGG TTCCTCCAAG GATCCAAAAT CCGTGTACGA TTTCTCTGTT AAGGATGCTA AGGGAGATGT GGTAGATCTC
TCCACTTACG AGGGAAAAGT CCTGCTGATT ATCAATGTTG CTTCTAAATG CGGCTTGACC AACTCCAACT ATACGGAGCT
GAATGAATTA TATGCGAAGT ATAAAGACGA AGGCTTGGAG ATTCTGGCAT TTCCATGTAA CCAATTTGGA GAACAAGAAC
CAGAAAGCAA TGATAAAATT GTGGACTTTG TCTGCACTCG TTTCAAATCT GAATTCCCCA TCTTTGATAA GATTGAAGTG
AATGGGGGTA ATTCAGCTCC TCTGTATAAA TTCTTGAAGT CCGGCAAATG GGGTATTTTT GGTGATGATA TTCAGTGGAA
CTTTGCCAAG TTTGTGGTTG ATAAGAAGGG ACAAGTAGTG GGTCGCTATT ATCCCACGAC TTCTCCTCTC AGCCTTGAGA
GAGACATCCG TCAACTTCTG GGTATTTCGT GAAGGCAACT GGGAAGAGAG GATATGGCGA ATGTGTTGTC TTCCTCAGTT
TCTTAACAGC TTTGTCTCGA GGCAATGTTA TGCAATAAGC ACCTTGTCAT ACAATGGCTT CCTCCTTTAC TTTCTTGTTT
CCTTTTTAAC TTCATTTCTA TCATAAACCA TACTTCTCTT CAGTTTTTTT AACCCTCGGT CTTCCTTAGT TATAAATGTT
TCACCTATGG AAGTTTCAAT TTTTG

>Vigan.10G215200.01
ATGTCCACCG GTTCCTCCAA GGATCCAAAA TCCGTGTACG ATTTCTCTGT TAAGGATGCT AAGGGAGATG TGGTAGATCT
CTCCACTTAC GAGGGAAAAG TCCTGCTGAT TATCAATGTT GCTTCTAAAT GCGGCTTGAC CAACTCCAAC TATACGGAGC
TGAATGAATT ATATGCGAAG TATAAAGACG AAGGCTTGGA GATTCTGGCA TTTCCATGTA ACCAATTTGG AGAACAAGAA
CCAGAAAGCA ATGATAAAAT TGTGGACTTT GTCTGCACTC GTTTCAAATC TGAATTCCCC ATCTTTGATA AGATTGAAGT
GAATGGGGGT AATTCAGCTC CTCTGTATAA ATTCTTGAAG TCCGGCAAAT GGGGTATTTT TGGTGATGAT ATTCAGTGGA
ACTTTGCCAA GTTTGTGGTT GATAAGAAGG GACAAGTAGT GGGTCGCTAT TATCCCACGA CTTCTCCTCT CAGCCTTGAG
AGAGACATCC GTCAACTTCT GGGTATTTCG TGA

>Vigan.10G215200.01
MSTGSSKDPK SVYDFSVKDA KGDVVDLSTY EGKVLLIINV ASKCGLTNSN YTELNELYAK YKDEGLEILA FPCNQFGEQE
PESNDKIVDF VCTRFKSEFP IFDKIEVNGG NSAPLYKFLK SGKWGIFGDD IQWNFAKFVV DKKGQVVGRY YPTTSPLSLE
RDIRQLLGIS *