GBrowse Details

Vigan.10G076900.01

Basic Information:
Name: Vigan.10G076900.01
Multiple alignment
Variant Information
Position: Chr10:8716637..8723201 (- strand)
Length: 6565
Functional Information:
Description: Similar to Uncharacterized protein. [G7JX88, Medicago truncatula]
InterPro: Protein of unknown function DUF1218 (IPR009606)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.86,6.36,20.75,8.84,27.73,49.03,19.52,21.25
Arabidopsis thaliana homolog: AT1G13380.1
Automatic updates:
Name: NM_001251142 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306644 (LOC100306644), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:8716637..8716847 (- strand)
Length: 211
Type: three_prime_UTR
Position: Chr10:8716848..8717115 (- strand)
Length: 268
Type: CDS
Position: Chr10:8717439..8717644 (- strand)
Length: 206
Type: CDS
Position: Chr10:8722821..8722922 (- strand)
Length: 102
Type: CDS
Position: Chr10:8722923..8723201 (- strand)
Length: 279
Type: five_prime_UTR

>Vigan.10G076900.01 class=Sequence position=Chr10:8716637..8723201 (- strand)
GTCACACACC CACTTCAATC ATTCTTCTCT ACCCTCCAAA AGGAACGTAT GATACACTCT CTGTAATCAC GCGTGAGTCC
AACATTCTCC ATCTCTCTCA AGAAGCTTTA TTGAACAAAC ATCGCTTTAC ACTATTAGGC CGCGAATCAG CAAAAGCATT
CACTTTGTTC ACACTTTTTT CACTGCACCT TCTCTCTCTC TCACCCTCTC ACTCTCTCTC AACTCAGCTA CACACACAAA
CCCATTTTGG CAGAGGGAAG ACCTTCGCTG CAGCTAGAGA TGGCAGAGGG AAGAGGGTCC ACTCTGGTCC ACCTTTTGGT
CGTCGTGTTG AGTTTGGTTG CGTTTGGCTT CGCCATTGCC GCAGAGAGAA GACGAAGCGT CGTAAGCCAC TGTTTTTTCT
CTCTCCCACA CATGCACTCA CATTTTAGTT TTTTTCTTTT TCTTTTTGCT TTTGTTCGCT TTTAGTTGCC TTTCCCCTAG
TCTATTAGTG TTTCCAGGCG AAGATAATTG TGTCGTAGCT TCACAATTTG ACATAGATCT ATGTTGAAAT TTATGACTGA
GTTTTGTAGT TGCCTTCCCT GGGATCTTTT CGCTAAGCTT TTCGATAACC ACATATAAAG AATATGAAAA CGATGAAATG
AACCGAGTTT TAATGAATTC CGCTTATCTT GTAAACGAAA CTAATGCATT TACTCTTTCT TCCGCTGTAT TGGATACAAG
AAAAAAAAAT ATAAACAAAT CTCTAAAGTA TTATTGATTT AATTGAAGTT TTATTTTTAG TACTCTATTT TTATATTAAA
TTTCAATGAA GAGTAATTTA AATGTTTTTT AATTAAATGT TAAGAACTAT CTTTCTTTAT TAATGTATTT TTTTTCTTAC
ATTAAAGAGT AACTTTTATA GATGATGTGC TGAAGTTCAT TTAGATTACC AGAAAATTAT TTTACCTCCT TTTTTTTTTC
TATGTCAGTA AGTCCTTAAA TGGAACCTTA TTTAGAGCTT ATTGAGTTTA GGGTTTGGGC CTTGTGGGTA TGTATGTCTC
TAAAACCGTG AAAATTTTGA AACTTAGATA ATACTAACTT TAACCTTTCT GTAAACAAAT CTTCTGGAAA CTGTTTTCCA
ACATTATTAA GTCACCGGAA GATGGAAATA ATGGTTATAT TTATTGTGTT ACCGAAATAG TAAAAATGTT AAGAATTTGA
TTAGCAGAGA TATAAGTATT TTGTAACAAT TTCTTTATTT TCCCAAAACT TTAGTAATAG AAGAAATGCA GAGCATGTTG
ATCCATGTAT ATTTCTGTAA GGTGTACACT AATGAAAACC ATTCTCAAAT TCTAGGGATT TAATAAATTA TTTGGTGAAA
TTTATCAAGT CAGTAGACTG TATTAATAAT ATATTCAGGA TGAGTTCTTT AATAATAAAT TATAAATTTC TTGGCTGATG
ATTGTAAACT CAGACAAAAC CAAAATTTGC ATTGTCATCT TTTGGTGTGC TAATGCACAC AGTGAAGTTT ACATGACTTT
GGTAACAAGA GAGAGAAGCT GGACCTTCTG TATAGTCAAT GGAGTTACAC ACCGTTCTCT GTGTTAATAA AAAATACCGA
GTAGAGACAT CTTATTTGAA CAAGACATTT AGAATGAAGA GAAATGAAAG GTTATGTATG ATATGTAATT AGTGGTGGGA
TAGAGAGAGG AAAAAAAGTA CTTCTTTATA AATTGTTGTA CAAAGAACAC AGCACTGGAG CATATTATTT ATTCATCATC
TTTCAACTCA ATGTTTCTCT CTCTTATACT TTAGAATGGT ATCAGAGTCA TTCAGACCCT ATACTAAGTA ATTTTGTTAG
GTCTCACCAG CGGTTGGGTT TTCATTTAGT TCCACACTCC ATATGTCATT CTTTGACTAG AAAGGTGATA TGGATAAGTG
GCATCTCTTC CTGAATGACC GCCAGTTCAA CCAATCAAGT ATTTCCCTTC TTAACTCAAA TTTTCTACCA ATGATCAGCT
TCCCTTTCCT CCTTAATTCT CCACTGGCAA GATAAATCCT TATATGAAGA AGGATATTTC GTCAATTCAG CAATCAGCCG
TTGTAAAGCA TCATCATTCT GCCATGATGC TTTGATTTTC CATAGTAGAT CAGAATCTGG TTGGTGTGTG GAAATTGAAG
CACATTCAAC CCTTGAAAGT GCATCAGCAG CTTGGTTCTC AATTCAAATG AAGTCATTCG ATGAGTTTTA CCAACCATTT
TCGTTGGAAG GCTGTGGAAA GTCTCTGATC CAGAATATAC TTGAGACTTC GGTGATCAGT TTTGATTACA AACTGCATAG
GTAATAAGTA ATGCTTCCAC TTTTGTACTG CATACACCAC TACTAGTAAT TCCTTCTCAT AAGTTGACAA TGATTGTTGT
TGAACATTCA AGCTTCGACT GATAAAAGCT ATAGGATGAT GATCTTGCAT AAGAACAGCT CCTACCCCGA CTCCTGAAGC
ATCCACCTCT ACCACAAAAG TCTTCGTAAA ATCAAGTAAG GCCAATACAC ACGCTTGGCT TAACTGATCC TTAAGACATT
GAAATGCCAA TTTAGCTTCA TTTGACCGAG AAAAACTGTC TTTTCTTAAC ATGTCATTCA TTTGTTTTGG CTATGGTGCT
GTATCTTCGC ACAAACTGAC TATAATAGCC CGCCAAACCC AAAAACCTCC CAGTTGCTTG AGGGTTTGAG GAAGTGGCCA
ATTTCTCACT GCTTCTACCT TAGCGGAGTC AGTAGAGACT CCTTTGCCCG TGATAAAATG CCCCTAGTAC TCTACTCTAG
TAACACTTAG ATTTCTTGGC TACCAAAGCA TTAGCGCGCA TGGTAGACAA GATTGTGTGT AAATGATGCA AATGATCCTC
CATGCTTTTG CTGTAAATCA GAAAGTCATA AAACGAGACC ATTAAGATCT TTGTCAAATA CTCTTGAAAC ATGGAGTTCA
TTAAACCCTG AAATGTGGCA GGATCAATGG TTAAGCGAAA AGGCATGGTA TTCATAATGC CTGACATGTG TTTTGAAGGC
TGTTTTATGT ATGTCTGTCT TTGCCATTCT GACTTGATTA TAATCTGACC GTAAGTCAAT TTTGGAGAAT ACACTAGAGC
CATATAGCTC ATCCAATAGA TCATCAACCA AGGGTATAGG GAACCTGTTC TTTACGGTAC TCTTGTTGAG GTCCCTGTAA
TCAATGTAAA GCCTCCAGCT TCCATCCTTT TTAACGACCA ACACCACTGG ACTGCTATAG GGGCTACTGC TGTTCAAATA
ACCCCACTTT TTAAGTAATC TTGTACCAAT TCATCCATTA TGTCCTTCTA TTGCTTAGAA TACTGATAAA GTCTCTTATT
CATAGGGTTA GTTCCTTGCA TCAAAGGAAT AGTGTGATCA TGATCCGGCC TTCTAGGTGG TGAGGTAGTG GGGACTGCAA
ACACATCTTC ATATTAAAGT AGCAACTGGT CAATACTGTT AGGAATTGTG GCAGATGTAG CATGGGTGGA CAGGGAATGC
AACAACAAGC CTTCTTCATC CTTACATATT TGCAAAATAG AAAGGTGAAC TACTGCAGCC ACAGTCTTAG GTATATGCGG
CTTACGAATC GTTTTGATAT TTGTAGAAGA ATTGCCACGC AAAACATGTC TTCTTCTTTG AGCAGTGAAC TCCATGGTTA
ACTTGTCAAA GTTCCATGTG ATATCCCCCA ATGTAATCTG CCATTCTATC CCAATAACCA TATCACAACA GCCTAGAAGA
CATGTTATTG TATAAGCCTA GAAAACCCTT TGATTATAGT ATTAATCTGT ACTCTTTCCT CATCAGCCAC AGTGACACTA
ACAGGATCCA TTTTGTCAAT CTTGCACCCT AATTTCTGGA CTACATCAAT ATCCAAGAAA TTATGGGTAC TCCCACTAAC
AATGAGAATG TGCAGCGACT TCTTCCTTAC ATGACTGTAA CCCGCATGGT CCAAAACTTG GCTACCCCTG TCAAGCACTG
ACATAAATCA TTGGTTCCGA AATAGGTGAA TCAGGAGGGG TTGCACTAGA TTTGGGGGCT TGATCAGAGT CAGAATTGTG
AGCTATTTCC ATGAAATGGA TTTGTAGTTT CTTGTGGGTT TGGCTATGGG CAAGGGTAAA GGGTTCATCA CAAAAGTAAC
AGAGACCTTT AGCCCTCCTT TCACTCATAT AGGAAGGGGT TAGCTGTTTA GTGAATTTTC CAAGGATGTG GAAGGGGTTA
ACAAGAGCGG CTTTGCAATT GGGTGGAGTT TGAGGTTTTT GGACAATGGT TTGGCGTGCA TGGCATTGGC ATTTTCATAC
ATCTTGGCCA AGGAAAAAGC TTTCATAACA AAGGTGGGTT GGAACATTCT CACCATCATT TGAATTTCCG TTTGTAGACC
AACAAGTAAA CAAGTCAATT GATGGGTTTC AGATAAGTCA AGTCTTGAAA CAATAGCATC AAATGCAGTA TGGTAGTCGG
TAGCATTGCC TTTCTGTTGC AGGCGCATCA GTTCTACCAT TGGTTCCTGG CAAACTTCTC CAAATCTTTC AATCAAGATT
TGTGTATAGG CATTCCAAGA AGGCAAACAA ATGTTCTAGT TACTTCATTC ATTATGATTC AGTTTAACAA GAATACAAGC
AAATGTTCTA GTTACTTCAT TCACTATGTC ACAATACTGT ATTTAAGCCT ACTTATAGCT GTGTATTCCA TAATAAGATG
ATTGGGAATT CTACAGCTTG TCCTATTGTT CATATGTGAT TCAAATATTC TTCTGATAAG AATTATCTTT TCCCAGTTAC
AACCACACCA CGTAAAGGGT TCATTTGCTT TTTCTCTGCC TCTTGGCTAG TAGTACAACG CCAAAATAAT TGTGTTGGGA
ATGATATGAC ATAAACTCTT TATATTGTCT GTTCTCAAGA GTTTTTAAAG GAGCATACCT TAATTGTGTG ACTGAGCTTG
AGTCTGAGTT TGAGTTGGAT TGCATATAAT TGATGAGAAA ATTGCTTATC ATGCATTCTT TCCAGATTGA TAGCCACCTC
TAAATGCCTT GACTTGAACA TGTTATTTTC GTCAATAGTC TTATCTTAAA GATCCCTATC ATACATAGAG CCTTTTTTGT
CATTGAAGAA TTTTGTTTGT CAATCTTGCT AGTTCTTGGT ATTTAATTCT AGTGACCTGT TTTTTTTTTT TTTTTAAATT
TTATTTGGGA AGGTCCTTTT CCTAATCCCC ATAATCAATG CAACTGATCC TGGAAAACAA CTCACTTTTA AACGCTTGCC
GCAGTTCTTG TTAAACTATA AAATAACGCT TTTGTAGAGC ATATCCAGCT CTGTAATTCA GAGTCATGGT GAATTTATCA
CCCTAGAAAG CTCTGCCACA CTTGCATAAT CGAAACTCTA GACATAGTTG TTGCTGCATT TACCTCTACT ACCCTTCAGT
TAAAGTTTTT GCAATCATTG TTTGCCTTAA ATAAGTTGTG CTGTATCTAT TTTGTTTCTA ATATTATTGT TAATTTGCAT
TGACAAGGCT GGCCCTCTTT TTCTTTGCTC TTGTCAGGGA ACCATGTTCA AAATTGAGAA AACAAATGAA ACATATTGCA
GCTACAGTTC AGATGTTGCG ACTGGTTATG GAGTGGGTGC TTTCCTGTTT CTTCTTTCAG GTGAATCACT GCTAATGGGA
GTGACAAAGT GCATGTGCTT TGGGAGGCCC TTAACACCTG GGGGAAATAG AGCATGGTCC ATTATATATT TTCTTTCCTC
TTGGTATGCA TTCTAAATTC TTACACAACA ATTGGTTATG CATTATCAAA GAAGCTAGAT GTTGTGTACG AATGATATAT
GATTCAAATG TATGCTTCTG TTATTCAAGT GAAAAGTCTC TTGGAGATTT TATTATATGC CTCATCTCTT ATGGTTTGAT
TGTTTTAACC CATAATGTGA TTTTTTACTT TGCAAGCAAC CAACTTAAAA ATATCATTTT TCTCTGCAGT ATGTGATTTT
TGTCGTTACT CGTATTAAGC CCTGGTCCCA ACAAGTTACA AAATATGACT CATTGAATCA AGACCACTTT TTTTATGTAT
TCCCAGGATC ACTTTTCTGG TGGCAGAAGC GTGTTTGATA GCAGGTGCAA CCAAGAATGC CTACCATACC AAATACCGTG
GAATGATTCT TGCTCAGAAC TTCTCGTGTG AAGCCTTGCG AAAAGGTGTT TTTGTTGCTG GCGCAGTTTT CATTGTTGCA
ACCATGATTC TGAACGTATA CTACTACATG TACTTCACAA AGGCAACTAC CACACCAGTT TCTCACAAGG CAAATCGGGT
GAGCTCAACA GTTGGAATGG CAGGATATGC ATGATAACAA ATTTAGTCTT AATTTCAATG GATGTCTCGA TGATTATCAC
TAAAACGGTG GTTTTCATTT GGTTTTTCCT AGTAAATCGA TGTTTATAAT GTTCATGTGG ATGTTACTAG TCAGAAGCAA
GCTATATATA TTATAATTAG GTAAAGAGGG TCTCATCATG TTGGTTTTCA GATAAACTTG ATATTCAAAG TGTGTAAAAT
GTTTT

>Vigan.10G076900.01
GTCACACACC CACTTCAATC ATTCTTCTCT ACCCTCCAAA AGGAACGTAT GATACACTCT CTGTAATCAC GCGTGAGTCC
AACATTCTCC ATCTCTCTCA AGAAGCTTTA TTGAACAAAC ATCGCTTTAC ACTATTAGGC CGCGAATCAG CAAAAGCATT
CACTTTGTTC ACACTTTTTT CACTGCACCT TCTCTCTCTC TCACCCTCTC ACTCTCTCTC AACTCAGCTA CACACACAAA
CCCATTTTGG CAGAGGGAAG ACCTTCGCTG CAGCTAGAGA TGGCAGAGGG AAGAGGGTCC ACTCTGGTCC ACCTTTTGGT
CGTCGTGTTG AGTTTGGTTG CGTTTGGCTT CGCCATTGCC GCAGAGAGAA GACGAAGCGT CGGAACCATG TTCAAAATTG
AGAAAACAAA TGAAACATAT TGCAGCTACA GTTCAGATGT TGCGACTGGT TATGGAGTGG GTGCTTTCCT GTTTCTTCTT
TCAGGTGAAT CACTGCTAAT GGGAGTGACA AAGTGCATGT GCTTTGGGAG GCCCTTAACA CCTGGGGGAA ATAGAGCATG
GTCCATTATA TATTTTCTTT CCTCTTGGAT CACTTTTCTG GTGGCAGAAG CGTGTTTGAT AGCAGGTGCA ACCAAGAATG
CCTACCATAC CAAATACCGT GGAATGATTC TTGCTCAGAA CTTCTCGTGT GAAGCCTTGC GAAAAGGTGT TTTTGTTGCT
GGCGCAGTTT TCATTGTTGC AACCATGATT CTGAACGTAT ACTACTACAT GTACTTCACA AAGGCAACTA CCACACCAGT
TTCTCACAAG GCAAATCGGG TGAGCTCAAC AGTTGGAATG GCAGGATATG CATGATAACA AATTTAGTCT TAATTTCAAT
GGATGTCTCG ATGATTATCA CTAAAACGGT GGTTTTCATT TGGTTTTTCC TAGTAAATCG ATGTTTATAA TGTTCATGTG
GATGTTACTA GTCAGAAGCA AGCTATATAT ATTATAATTA GGTAAAGAGG GTCTCATCAT GTTGGTTTTC AGATAAACTT
GATATTCAAA GTGTGTAAAA TGTTTT

>Vigan.10G076900.01
ATGGCAGAGG GAAGAGGGTC CACTCTGGTC CACCTTTTGG TCGTCGTGTT GAGTTTGGTT GCGTTTGGCT TCGCCATTGC
CGCAGAGAGA AGACGAAGCG TCGGAACCAT GTTCAAAATT GAGAAAACAA ATGAAACATA TTGCAGCTAC AGTTCAGATG
TTGCGACTGG TTATGGAGTG GGTGCTTTCC TGTTTCTTCT TTCAGGTGAA TCACTGCTAA TGGGAGTGAC AAAGTGCATG
TGCTTTGGGA GGCCCTTAAC ACCTGGGGGA AATAGAGCAT GGTCCATTAT ATATTTTCTT TCCTCTTGGA TCACTTTTCT
GGTGGCAGAA GCGTGTTTGA TAGCAGGTGC AACCAAGAAT GCCTACCATA CCAAATACCG TGGAATGATT CTTGCTCAGA
ACTTCTCGTG TGAAGCCTTG CGAAAAGGTG TTTTTGTTGC TGGCGCAGTT TTCATTGTTG CAACCATGAT TCTGAACGTA
TACTACTACA TGTACTTCAC AAAGGCAACT ACCACACCAG TTTCTCACAA GGCAAATCGG GTGAGCTCAA CAGTTGGAAT
GGCAGGATAT GCATGA

>Vigan.10G076900.01
MAEGRGSTLV HLLVVVLSLV AFGFAIAAER RRSVGTMFKI EKTNETYCSY SSDVATGYGV GAFLFLLSGE SLLMGVTKCM
CFGRPLTPGG NRAWSIIYFL SSWITFLVAE ACLIAGATKN AYHTKYRGMI LAQNFSCEAL RKGVFVAGAV FIVATMILNV
YYYMYFTKAT TTPVSHKANR VSSTVGMAGY A*