GBrowse Details

Vigan.10G068400.01

Basic Information:
Name: Vigan.10G068400.01
Multiple alignment
Variant Information
Position: Chr10:7610561..7614452 (- strand)
Length: 3892
Functional Information:
Description: Similar to Uncharacterized protein. [I1JBN2, Glycine max]
GO: Biological Process: transmembrane transport (GO:0055085)
InterPro: UAA transporter (IPR013657)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.70,21.79,26.35,15.57,64.94,35.19,26.31,21.55
Arabidopsis thaliana homolog: AT1G14360.1, AT2G02810.1
Automatic updates:
Name: NM_001255506 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max UDP-galactose/UDP-glucose transporter (LOC100811913), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:7610561..7610931 (- strand)
Length: 371
Type: three_prime_UTR
Position: Chr10:7610932..7611340 (- strand)
Length: 409
Type: CDS
Position: Chr10:7612228..7612349 (- strand)
Length: 122
Type: CDS
Position: Chr10:7612450..7612553 (- strand)
Length: 104
Type: CDS
Position: Chr10:7613127..7613157 (- strand)
Length: 31
Type: CDS
Position: Chr10:7613467..7613597 (- strand)
Length: 131
Type: CDS
Position: Chr10:7613831..7613928 (- strand)
Length: 98
Type: CDS
Position: Chr10:7614030..7614133 (- strand)
Length: 104
Type: CDS
Position: Chr10:7614134..7614452 (- strand)
Length: 319
Type: five_prime_UTR

>Vigan.10G068400.01 class=Sequence position=Chr10:7610561..7614452 (- strand)
CAAGAAACTG ACGAAAAGAC CAAATAGGGT GGACCGACAT TAGGAGGAGT CTACCGCTAA AAAGTGAAAA CGCGGCACGC
GTTGGCGCGT CCAATGGGAG CGTAATGACA TGGCATCATC CAATAATACT CAGCCACGTG GCGAATCCAC GTAGCATAGC
TTGGCGCACA CTTCACACTT CTAAGCTCCT TCTTTCACTG TCCCCATTTC TATTATTATT TCATTATTTG ATCCATTCTT
CACCGCGGTT GCTTCTCTCA ACGGCGTTTC CTTCATTCAA TACTCTATAA TAGTAAAAGA ACCGAATCGT GCGGATCTCA
TGGAGGCCCA CGGCGGAGGG CTCCGCCGCA TCCTGCTCCT CGCCTTCTGC GTCGCCGGAA TCTGGTCGGC CTACATCTAC
CAAGGCGTTC TGCAGGAAAA CGTGTAAGAA TCCCAATTCG TTCCGAAATT CTCGTAACCG TCGTGAGTTT CGAAATGCCT
TTCGTTGCTA ATGTTTTTTT AGTTGTTTTT GAATTTTGTT TCAGGTCGAC CAAGCGATTC GGTCCGAACG GTGAAAGGTT
CGAGCACCTT GCGTTTCTGA ACTTGGCGCA GAGTGTGGTG TGTTTAATCT GGTCGTTTAT AAGTAAGATT CTATCGCCAA
TTAGTAATAA GTGTGTGAAT ATATTTGATT TGAATTTATG TTTTATGCGT TGTTGCTCTA AAACTTGTTG GAAATTCCGT
GTGTATTACT TTTTAAAGCC GTTATCTTAC GGCAAATTAT GATTGAGTTA TAGTATATGT ATATTTTTTA TACTGTGTGT
ATTTACGTCA GATCCGCTTA ACATTTTATT TTAATCACTT TTTTTATGCG TACAGTGATA AAGATATGGT CCAGTGGAAA
TTCTGGTGGT GCTCCTTGGT GGAGTTATTG GAGCGCTGGA ATTACCAACA CCATTGGTCC CGCTATGGGA ATTGAAGCTT
TGAAGTATAT TAGTTACCCT GCTCAGGTGT GATTTCTTCA ACACCTTTTC TTCCCTCGTC TTTTTTATTT GAAAGTTATA
AGTATTAGTA AATCGATTTC GGTATTATGT ACGAAAATCC ATTCTTCTTT CTTGAAAATC AATGAAATAA CTATTTTACA
GATAATGGAT GATACACAAG CTATCCTTAC CACGCATCTA AGTTGAAGCA AGTATTTTTA TATTTATGCT GCATGGTGCA
GCATTTCTGG CGAACTTATT GTCCAGTCAT TCATTGTTTT CGGCACGAGG CTGTATGATC TTTTTAATGG GTGGTGTTAA
TTTTTCTACT TGCAGGTGCT GGCGAAGTCT TCCAAAATGA TTCCAGGTCA GTATATTGTG CTTGATGGAC AAAAGTTTGC
ATTTTAATTA AAAGCAATGG GAACTTAGCT TATTTTTTAT ATCTTCTGCA TATTCCCTTA ATATATGATT GAATTATATC
ACTATATTGT GTGTGCGTCT GTGTTTTTGT ATACTTTTGG TTTACGGGGA CTAGGGATAG GTTGTATGTG AATTTCACTT
TATTAAGTTC AATAGGTCAA AGGAAGCGAG TCTTTTAGCA TTTTACCAAT ACCATGGAAA CTGTTGTGGT TATGTATTTT
TTGAGACTTT TTAGCTCTTG TACTTGTGCA TTTGACTTGA GAATCCATTG TGATTTGTAT CTTAAACTTT TACTTATTAT
GCACCCATTC TTTCCGATTT GCTTATGGAT CTGCGCAAAT AATTAAATTC CATGGTTTTT TACCTTTGTT TGATCATGCT
AGAGCTTCTG GCAGGGACTG ACATATAAAA CATTTGGAAG AAATGATGAT AGAAAAATCT TATAATAATT TTTTTGTCGA
ATTTCTTAAA AAAATTAAAT TTATATGTCT AACAAAAGAT TCACTTCACC TAAATGCAGT TATGTTGATG GGTACTCTAG
TATATGGGAT AAGATACTCT CTTCCAGAAT ACATTTGTAC ATTCCTTGTT GCTGGAGGGG TATCAACATT TGCTCTTCTA
AAGGTTAGGA ACTTGTCAGA ATAATAAAGC TCACTCCTCT TATCAAGGAA AGTTTTTTAG TCTATGAACC CAGCTTAGCA
TTATTTGTTT ATGCTAATTA CAGACGAGCT CAAAGACAAT CAGCAAGCTG GCACATCCAA ATGCTCCCCT TGGCTATGGG
TTATGTTTCC TGAACCTTGC TTTTGATGGA TTTACCAATG CTACCCAGGA TTCTATAAAA GGAAGGTAAT AATAGAGAAG
TTTTTTTCTT TTTGTTTTGC ATATTACAAT TTCAGTCTGT CTGATGTCTT GTTGACTACC AAATTTAACA TGCACTTCGT
TGATTTACTC TTTACTATTT TCACACCCCC TCCTTCCTCT CGTTGTATTT TTTTTTTCTT TTAATGAGAA CAATTTTCTA
AATGTAGAAG TTCTTGAAAT TGTTTCTTTC ATTGGTTTAG GTGTTGTCTT TTTTTAGTCA AGCTATGAAG TATGAAATGC
GGTTATATTT ATTATCTCGG TTAAACACAT CTTTTAGAGT TAATGCTGAT ACCTGATTAT ATGAACCAAA GTGGATTGGC
TTAGAATGTG AGGCTTACGT ATTTAGTCTA CGGGGTTGAA ATAGTGGTCT TCCATTGGAT TGTCTCTGGT GAATAATTTA
GTAGTCAAGT AAACAAAACT AAATACAAAT TTTCATGTTC CTCTCTCTCT CTCTCTTTAT TTAATCAGCA ATAACAAACA
AATTGGAAGG GGACAATAGG ATTGTCCCGA CCCTTATACA AAAACATAAA AGAAAAAAAA AAGAGGAGAA AGGGAACAAA
AAATAAAAAG AAACAGATAC CCAGCTCTAA ATACTTTCTC CAACAAACCC AAAACGGGAA GACAGAAACC TTTCGCAAAA
CTCAGAATTC CTAACAACCA CAATACCAAC CAAAGACCTA TAACCCAACA AATGACAAGA GCGATCCTCT TTCACACGTC
AAATAGTTGA ACTTTCATTC GAAATTGACT TCTGAAATCT CAACACTGTT GGGCTTTCTG AGTGGCAAAT GACTCTTTTA
GTTGACAACA TCTTACATAC AGATTCATTA ATGTTAACTA TATTATTTTT AACTATTGGT TTGGCTTTCC AGGTATCCAA
AAACAAGTGC TTGGGGTATT ATGCTGGGCA TGAATTTATG GGGAACCATA TACAATTTGA TTTACATGTT CGGATGGCCC
CATGCCAGTG GATTTGAGGC AGTTCGATTC TGCAAACAGT ATCCAGAGGC AGCATGGGAT ATTTTTCTCT ATTGTTGCTG
CGGTGCTGTG GGCCAAAATT TTATCTTCTT GACCATAAGC CGGTTTGGCT CTTTGGCAAA CACTACCATC ACTACCACCC
GCAAATTTGT TAGCATTGTG ATATCTTCCG TATTGAGTGG GAATCCCCTG TCAACAAAGC AATGGGGGTG TGTTTTTATG
GTGTTCTCAG GATTGTCTTA TCAGATCTAT CTCAAGTGGG AGAAGTTGCA GAGATTGCAG AAGAAAAGAA AAGCCATGTG
AAGCCTTCAG CAATTTTGAA GTCAACGTTA ATACTATCCT AGTTAATTTG CCCCCTTACT AAAACCTTGA AGGTTTAATG
AACCGGATTT AGGTTTAAGC AAAAAAAAAA TATATATATA TGTAATTTTA ATTGATAGAT ACTTTCCGAG AAAAGTTCAA
AGTTTAGTCA CCATTTTCTC ATTCCTTTTG GATATTTTTA GTTGCCTGCA TTTTACTGAA ATGCTGGATT TAGTTTGAGT
ATAATACTAA GATAAAGTTA TACTCTCTGT AAACATGATT GTCAGAAGAT CACATCACCT CGTTTGTTTA GAGATCATCA
CAGTATCGTA TGAACCCCAA AATTAGCTTT GCTGGTTTAT TTTGCTTCCA GA

>Vigan.10G068400.01
CAAGAAACTG ACGAAAAGAC CAAATAGGGT GGACCGACAT TAGGAGGAGT CTACCGCTAA AAAGTGAAAA CGCGGCACGC
GTTGGCGCGT CCAATGGGAG CGTAATGACA TGGCATCATC CAATAATACT CAGCCACGTG GCGAATCCAC GTAGCATAGC
TTGGCGCACA CTTCACACTT CTAAGCTCCT TCTTTCACTG TCCCCATTTC TATTATTATT TCATTATTTG ATCCATTCTT
CACCGCGGTT GCTTCTCTCA ACGGCGTTTC CTTCATTCAA TACTCTATAA TAGTAAAAGA ACCGAATCGT GCGGATCTCA
TGGAGGCCCA CGGCGGAGGG CTCCGCCGCA TCCTGCTCCT CGCCTTCTGC GTCGCCGGAA TCTGGTCGGC CTACATCTAC
CAAGGCGTTC TGCAGGAAAA CGTGTCGACC AAGCGATTCG GTCCGAACGG TGAAAGGTTC GAGCACCTTG CGTTTCTGAA
CTTGGCGCAG AGTGTGGTGT GTTTAATCTG GTCGTTTATA ATGATAAAGA TATGGTCCAG TGGAAATTCT GGTGGTGCTC
CTTGGTGGAG TTATTGGAGC GCTGGAATTA CCAACACCAT TGGTCCCGCT ATGGGAATTG AAGCTTTGAA GTATATTAGT
TACCCTGCTC AGGTGCTGGC GAAGTCTTCC AAAATGATTC CAGTTATGTT GATGGGTACT CTAGTATATG GGATAAGATA
CTCTCTTCCA GAATACATTT GTACATTCCT TGTTGCTGGA GGGGTATCAA CATTTGCTCT TCTAAAGACG AGCTCAAAGA
CAATCAGCAA GCTGGCACAT CCAAATGCTC CCCTTGGCTA TGGGTTATGT TTCCTGAACC TTGCTTTTGA TGGATTTACC
AATGCTACCC AGGATTCTAT AAAAGGAAGG TATCCAAAAA CAAGTGCTTG GGGTATTATG CTGGGCATGA ATTTATGGGG
AACCATATAC AATTTGATTT ACATGTTCGG ATGGCCCCAT GCCAGTGGAT TTGAGGCAGT TCGATTCTGC AAACAGTATC
CAGAGGCAGC ATGGGATATT TTTCTCTATT GTTGCTGCGG TGCTGTGGGC CAAAATTTTA TCTTCTTGAC CATAAGCCGG
TTTGGCTCTT TGGCAAACAC TACCATCACT ACCACCCGCA AATTTGTTAG CATTGTGATA TCTTCCGTAT TGAGTGGGAA
TCCCCTGTCA ACAAAGCAAT GGGGGTGTGT TTTTATGGTG TTCTCAGGAT TGTCTTATCA GATCTATCTC AAGTGGGAGA
AGTTGCAGAG ATTGCAGAAG AAAAGAAAAG CCATGTGAAG CCTTCAGCAA TTTTGAAGTC AACGTTAATA CTATCCTAGT
TAATTTGCCC CCTTACTAAA ACCTTGAAGG TTTAATGAAC CGGATTTAGG TTTAAGCAAA AAAAAAATAT ATATATATGT
AATTTTAATT GATAGATACT TTCCGAGAAA AGTTCAAAGT TTAGTCACCA TTTTCTCATT CCTTTTGGAT ATTTTTAGTT
GCCTGCATTT TACTGAAATG CTGGATTTAG TTTGAGTATA ATACTAAGAT AAAGTTATAC TCTCTGTAAA CATGATTGTC
AGAAGATCAC ATCACCTCGT TTGTTTAGAG ATCATCACAG TATCGTATGA ACCCCAAAAT TAGCTTTGCT GGTTTATTTT
GCTTCCAGA

>Vigan.10G068400.01
ATGGAGGCCC ACGGCGGAGG GCTCCGCCGC ATCCTGCTCC TCGCCTTCTG CGTCGCCGGA ATCTGGTCGG CCTACATCTA
CCAAGGCGTT CTGCAGGAAA ACGTGTCGAC CAAGCGATTC GGTCCGAACG GTGAAAGGTT CGAGCACCTT GCGTTTCTGA
ACTTGGCGCA GAGTGTGGTG TGTTTAATCT GGTCGTTTAT AATGATAAAG ATATGGTCCA GTGGAAATTC TGGTGGTGCT
CCTTGGTGGA GTTATTGGAG CGCTGGAATT ACCAACACCA TTGGTCCCGC TATGGGAATT GAAGCTTTGA AGTATATTAG
TTACCCTGCT CAGGTGCTGG CGAAGTCTTC CAAAATGATT CCAGTTATGT TGATGGGTAC TCTAGTATAT GGGATAAGAT
ACTCTCTTCC AGAATACATT TGTACATTCC TTGTTGCTGG AGGGGTATCA ACATTTGCTC TTCTAAAGAC GAGCTCAAAG
ACAATCAGCA AGCTGGCACA TCCAAATGCT CCCCTTGGCT ATGGGTTATG TTTCCTGAAC CTTGCTTTTG ATGGATTTAC
CAATGCTACC CAGGATTCTA TAAAAGGAAG GTATCCAAAA ACAAGTGCTT GGGGTATTAT GCTGGGCATG AATTTATGGG
GAACCATATA CAATTTGATT TACATGTTCG GATGGCCCCA TGCCAGTGGA TTTGAGGCAG TTCGATTCTG CAAACAGTAT
CCAGAGGCAG CATGGGATAT TTTTCTCTAT TGTTGCTGCG GTGCTGTGGG CCAAAATTTT ATCTTCTTGA CCATAAGCCG
GTTTGGCTCT TTGGCAAACA CTACCATCAC TACCACCCGC AAATTTGTTA GCATTGTGAT ATCTTCCGTA TTGAGTGGGA
ATCCCCTGTC AACAAAGCAA TGGGGGTGTG TTTTTATGGT GTTCTCAGGA TTGTCTTATC AGATCTATCT CAAGTGGGAG
AAGTTGCAGA GATTGCAGAA GAAAAGAAAA GCCATGTGA

>Vigan.10G068400.01
MEAHGGGLRR ILLLAFCVAG IWSAYIYQGV LQENVSTKRF GPNGERFEHL AFLNLAQSVV CLIWSFIMIK IWSSGNSGGA
PWWSYWSAGI TNTIGPAMGI EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYSLPEYI CTFLVAGGVS TFALLKTSSK
TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSIKGRYPK TSAWGIMLGM NLWGTIYNLI YMFGWPHASG FEAVRFCKQY
PEAAWDIFLY CCCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVISSV LSGNPLSTKQ WGCVFMVFSG LSYQIYLKWE
KLQRLQKKRK AM*