GBrowse Details

Vigan.10G066700.01

Basic Information:
Name: Vigan.10G066700.01
Multiple alignment
Variant Information
Position: Chr10:7201016..7204311 (+ strand)
Length: 3296
Functional Information:
Description: Similar to Uncharacterized protein. [I1JE29, Glycine max]
InterPro: TB2/DP1/HVA22-related protein (IPR004345)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.03,10.96,4.65,17.93,27.51,13.74,16.17
Arabidopsis thaliana homolog: AT1G69700.1
Automatic updates:
Name: NM_001248505 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306464 (LOC100306464), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:7201016..7201147 (+ strand)
Length: 132
Type: five_prime_UTR
Position: Chr10:7201148..7201209 (+ strand)
Length: 62
Type: CDS
Position: Chr10:7201344..7201370 (+ strand)
Length: 27
Type: CDS
Position: Chr10:7201462..7201584 (+ strand)
Length: 123
Type: CDS
Position: Chr10:7203433..7203700 (+ strand)
Length: 268
Type: CDS
Position: Chr10:7203921..7203989 (+ strand)
Length: 69
Type: CDS
Position: Chr10:7203990..7204311 (+ strand)
Length: 322
Type: three_prime_UTR

>Vigan.10G066700.01 class=Sequence position=Chr10:7201016..7204311 (+ strand)
TTTCAATTTT ACTTTCTTGT TTGGAGTGTC CCACTTTTGA AGCCTCTCTG TTTTCCTTTG TCTCGCTTTA CAAACCCTCA
TCTGTGTTCC AATCAAAAGG ATCCACAAAG AAAAATAGCA ACATTGCATC AAATGGGTAC TTCTGGCGAC AGTTTTCTCC
AAGTTCTCTT CAAGAACTTC GATGTTCTTG CTCTGTATGC TTCTTGTCCA TTACATCTCT ATGCTTGAAT GTCATTGTAT
GATGTAGATT CACATGAAAA ATTTAAACTT TTTGTGTGTT ACATTGAATC ATTTTGATCT GAGATTTGTG TTTTTGCTTT
TTGTTCAGAC CCTTGGTCAC CCTGGTTTAC CCTTTGTAAG TATGACTTTT GTTTTTTGAA TGTGACTTTT TGAAAAAAGT
GTTTGAGGTT TTGATTTTTG AGTGTATCTT TTGGTGTTTG TGGCAGATAT GCTTCGATAA AGGCCATAGA GAGTAGGTCT
AGTATTGATG ATCAGCAATG GCTCACTTAT TGGGTTCTCT ATTCTTTGAT CACTCTGTTT GAGCTCACAT TTTCCAAAGT
TCTTGAAGTG TAAGTTAATC ACTGAATCTC AACATTTTTT GGATGCTTTA TATTGAAGTA TGCAATTTCT TTGTGGTGCA
TTGTTTGAAT CTTGACAGAG GTATGAAAGG GAAGGGTGTG TTTGATTTTC TATGTGCTGT TTTTAGTTTT CAAAATCAAC
TAAACATGGT GGAAAGTAAA AGGGTGGTGT TAAGCACAAA ATAGAGTGTG AACTTGAAGG AGGGGTGAAA CAAGATGGAA
AATGTCTCTC ATCAGTTGTT TCTTTCTCTT TTTAACATTC CTGTTTATGA AACAATTTTC ATATCTTTAT AGATTTTAAT
GAAAGCATCA TTGCTGAATA GTTCAAAATT ATAAAACAAA ATGAGTTTTT TTTTTACCAT TTTTTGTGTA ATTTTATTTT
GAATTACTAA AATGGGTAAC TTTTAAAAAA ATTTCGAACT GAACATGGTA AGTCATACCA GATTGATACC ACCTCATAAA
GAAAAAGTCA TGCTATTCTA GGGTGATTAT ACTTTAATTG AAATGAAATC AAGTCAAGCC AAAACACTTT TATAACTTCA
GTTCATGCTA TAAAAGAACT GAAATTGTCA CAACATCATA CAACTTCATT ACATTCGACT TCAACACATT TCATGAAGAA
ATGGAAATCG TCACAATGTC ATACGACTTC TTTACATTTT ATAGAACACA TAAATTACCT CAAGATGTGA CAACATCATA
GTACATTCGA CTTTAACACA TTTCATAAAG AAATTGAAGT AGTCACATTG TCATTTGACT TCTTTATTAT TTTATAAAAC
ACATAAATCG CCTGATGTGA CGACTTCATT TTTTTATGAA ATTTGTTTTG ACTTGACATG ATTTCATTTT ACTTAAAGTA
AAATCGTCTC TGCATGAGAG GACTTTTTCA ACTTAACATG ATTTGTGCAA GTTCAAATGT TTTTAAAAAA TTATCACATT
GATAATTTCA TAATGAAAAT ATACCTTAAT GGTAAAAAGC CACGAAATAA TAGAAAAACA ATCATTCATG CACTTCCGTT
GTTATTTTGG TTTCTGAAAA CATAATGATT TTATTTATTT AAAGTTCAAA TTTTAAGTTA AAAATCATGG GTTTTAACTT
TTGAGTGTGT TTTACAGGTC TTTTTAAGAT AACTAGCTTA TTTTATTTGA AAGAACCCTT GACCATTATT GAGCCATTTG
TTGTGAGCAT GTTCAGCTAA CTAATTTATA ACATTTTGTT TTAAATGCTA AGTAATATAT GAGTTTATAA CTTATTATAA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TTTTATCTTC
AATATTCTAT CAACATTCAT CACTATCTCT TTTCAAATTA TGTTATTTAT TTTAGTTTTA AATTTTTTAT TTCATACTAT
TTTTTAATGA AATATTTTAT CCTTAAGAGA ACTATAAAAA CATTCAGACT TAACTAAATA TTAGATATAA GATAGTAACA
AATAAAATTA CAAGTAAAGG TGTAAAAAAA TTAAAAACGT TTTAGTAGTG TACACATTCT TAAATTATTA ACAATTATTT
AGCAGTTTGC CTCATTTTAA TAATCATACA TAATACTAAG TTTGTGTTTA TTCATTGAGT TAAATACATG AACATGATTA
TGGTTAAGTA CTTAATTAAG TTTAAGTAAT TTACCAATAC CAATTAGTCT TTTAGTTATC ACTTGGGGGG AATTTTCATT
TTCAAAAGGT TCTCTCACAA GTTCTTTGCT TGGCTAGAAA AGTTTTAAGA AACTAAACCA TTGTAACTTT CCAATGTAAT
TGTGTTCCTA ATTTCAGGCT TGCCATTTGG CCTTATGCCA AGTTGATACT TAGTTGCTGG CTAGTTCTTC CGCAGTTCAG
TGGGGCAGCA CATGTTTATA GGCACTATGT TAGACCATTC TATATGAATC CACAAATGCC ACAAATGCCA AAGTTTCCAG
GAGCCTCTCA AATGTGGTAT GTTCCTCGAA AGAACATATT TAGTAAGCAG GATGATGTCC TTTCTGCTGC TGAGAGGTAC
ATGGAAGAGC ATGGAACTGA AGCATTTGAA AGACTCATAA CCAAGGTACA CATTGTCCAA ATTTTTTTGT GACCAGTAGT
TATGGAAACC AAGAATCTTA TGGAAGGATT TAGATGTAAA TTATAGTTAC TTTTGTTAAT TTCATTGAGA ACAGAATTTA
TAGGAAGCAT CCCTGTTTTA GTGCAATTTA AGCATGAAAA TATATGTAGC TAGGTTTGTT TTTAATCATA AAAAACACTT
ATGGTTTGGT TGTTGATATA TGCAGGCTGA CAGAGAAGCT AGAGGACGGA GGAACGGAAG TTATATGATC TTTGATGATG
ATTATATATA TTAATTAACT GTGTTAACCC TTAAACTCAT CTGTAGTATC ACCGTGGCGA TACTTTAATA GTGATTTAAG
TGTAAGACTT ATGAACTTAG TTAATCTAGA TATAAGTCTA GTTCAGGTTG AGATATTTCA TCTAGTTAAT TCAACTATAA
AGGCAAAAGG AGGAAAGATA AAAAAAATGG AGAAAGTGAT GGAGAATCAT TGCCGTGATC AGAGTCAGGA GTAATCACTA
CCTTCTTTTC CAAAGTTTTT TTCGACTTCA ACTATGTGGA TATGAACACA CTGACTTTAC TTTTCGCTGA ACTAAATTTG
ATAAGAAAAA TGTGCA

>Vigan.10G066700.01
TTTCAATTTT ACTTTCTTGT TTGGAGTGTC CCACTTTTGA AGCCTCTCTG TTTTCCTTTG TCTCGCTTTA CAAACCCTCA
TCTGTGTTCC AATCAAAAGG ATCCACAAAG AAAAATAGCA ACATTGCATC AAATGGGTAC TTCTGGCGAC AGTTTTCTCC
AAGTTCTCTT CAAGAACTTC GATGTTCTTG CTCTACCCTT GGTCACCCTG GTTTACCCTT TATATGCTTC GATAAAGGCC
ATAGAGAGTA GGTCTAGTAT TGATGATCAG CAATGGCTCA CTTATTGGGT TCTCTATTCT TTGATCACTC TGTTTGAGCT
CACATTTTCC AAAGTTCTTG AAGTGCTTGC CATTTGGCCT TATGCCAAGT TGATACTTAG TTGCTGGCTA GTTCTTCCGC
AGTTCAGTGG GGCAGCACAT GTTTATAGGC ACTATGTTAG ACCATTCTAT ATGAATCCAC AAATGCCACA AATGCCAAAG
TTTCCAGGAG CCTCTCAAAT GTGGTATGTT CCTCGAAAGA ACATATTTAG TAAGCAGGAT GATGTCCTTT CTGCTGCTGA
GAGGTACATG GAAGAGCATG GAACTGAAGC ATTTGAAAGA CTCATAACCA AGGCTGACAG AGAAGCTAGA GGACGGAGGA
ACGGAAGTTA TATGATCTTT GATGATGATT ATATATATTA ATTAACTGTG TTAACCCTTA AACTCATCTG TAGTATCACC
GTGGCGATAC TTTAATAGTG ATTTAAGTGT AAGACTTATG AACTTAGTTA ATCTAGATAT AAGTCTAGTT CAGGTTGAGA
TATTTCATCT AGTTAATTCA ACTATAAAGG CAAAAGGAGG AAAGATAAAA AAAATGGAGA AAGTGATGGA GAATCATTGC
CGTGATCAGA GTCAGGAGTA ATCACTACCT TCTTTTCCAA AGTTTTTTTC GACTTCAACT ATGTGGATAT GAACACACTG
ACTTTACTTT TCGCTGAACT AAATTTGATA AGAAAAATGT GCA

>Vigan.10G066700.01
ATGGGTACTT CTGGCGACAG TTTTCTCCAA GTTCTCTTCA AGAACTTCGA TGTTCTTGCT CTACCCTTGG TCACCCTGGT
TTACCCTTTA TATGCTTCGA TAAAGGCCAT AGAGAGTAGG TCTAGTATTG ATGATCAGCA ATGGCTCACT TATTGGGTTC
TCTATTCTTT GATCACTCTG TTTGAGCTCA CATTTTCCAA AGTTCTTGAA GTGCTTGCCA TTTGGCCTTA TGCCAAGTTG
ATACTTAGTT GCTGGCTAGT TCTTCCGCAG TTCAGTGGGG CAGCACATGT TTATAGGCAC TATGTTAGAC CATTCTATAT
GAATCCACAA ATGCCACAAA TGCCAAAGTT TCCAGGAGCC TCTCAAATGT GGTATGTTCC TCGAAAGAAC ATATTTAGTA
AGCAGGATGA TGTCCTTTCT GCTGCTGAGA GGTACATGGA AGAGCATGGA ACTGAAGCAT TTGAAAGACT CATAACCAAG
GCTGACAGAG AAGCTAGAGG ACGGAGGAAC GGAAGTTATA TGATCTTTGA TGATGATTAT ATATATTAA

>Vigan.10G066700.01
MGTSGDSFLQ VLFKNFDVLA LPLVTLVYPL YASIKAIESR SSIDDQQWLT YWVLYSLITL FELTFSKVLE VLAIWPYAKL
ILSCWLVLPQ FSGAAHVYRH YVRPFYMNPQ MPQMPKFPGA SQMWYVPRKN IFSKQDDVLS AAERYMEEHG TEAFERLITK
ADREARGRRN GSYMIFDDDY IY*