GBrowse Details

Vigan.09G166600.01

Basic Information:
Name: Vigan.09G166600.01
Multiple alignment
Variant Information
Position: Chr09:30787657..30789649 (- strand)
Length: 1993
Functional Information:
Description: Similar to serine acetyltransferase 5-like. [XP_004510733.1, Cicer arietinum]
GO: Biological Process: cysteine biosynthetic process from serine (GO:0006535)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: serine O-acetyltransferase activity (GO:0009001)
Molecular Function: transferase activity (GO:0016740)
InterPro: Bacterial transferase hexapeptide repeat (IPR001451)
Serine O-acetyltransferase (IPR005881)
Serine acetyltransferase, N-terminal (IPR010493)
Trimeric LpxA-like (IPR011004)
Hexapeptide transferase, conserved site (IPR018357)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:23.14,20.81,23.21,35.68,62.59,70.97,51.29,33.22
Arabidopsis thaliana homolog: AT5G56760.1
Automatic updates:
Name: NM_001248711 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine acetyltransferase (LOC547632), mRNA.
PubMed ID: 14586654 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr09:30787657..30788103 (- strand)
Length: 447
Type: three_prime_UTR
Position: Chr09:30788104..30788595 (- strand)
Length: 492
Type: CDS
Position: Chr09:30789072..30789440 (- strand)
Length: 369
Type: CDS
Position: Chr09:30789441..30789649 (- strand)
Length: 209
Type: five_prime_UTR

>Vigan.09G166600.01 class=Sequence position=Chr09:30787657..30789649 (- strand)
ACAGGATTGC ATTAGGAAAC ATCAAGCGAA GAACAAAGGA ATATGAATGC TTTTGATTCG TGAATACCCA ACGAAGGAGT
GAATGGTTGT CTTGTCCCTC TTCGTTTCTT GGATCTTAAT CTTGTTTCTC ACAGTACCAC ACTTTTTTCA CAGCTTCTCA
ACCGCACAAA CCCCAACGCC AAACCATAAT CGCAACACAT CACCAAACAA TGCCGACGGG GCTACCGGCG GCGAACACCG
TCGTCTCGAG CGACGACGAG GGCTGGGTGT GGGCTCAGAT CAAGGCGGAG GCGCGCCGCG ACGCCGAGTC GGAGCCGGCG
CTGGCGAGCT ACCTGTACTC GACGATCCTC TCGCACTCCT CGCTCGAACG TTCTCTCTCG TTCCACCTGG GTAACAAGCT
CTGTTCTTCT ACGCTACTAT CCACTCTCCT CTACGACCTC TTCCTCAACG CCTTCTCCTC CGACCCCTCG CTCAGTTCCG
CCGCCGTCGC GGACCTCCGC GCTGCCCGCG AACGTGACCC TGCCTGCGTT TCCTACTCTC ACTGTCTTCT CAATTACAAA
GGCTTCCTCG CCTGCCAGGT CCAATTCCTT GTTCATCCTC AATTCTAGGG ATCTGAATCC TTCAGTTCTA GGTTTTTGTG
CTAATTCAGT TTAATTGCCA TTCACATCAT CATCCATTCA GAAATCATGT ATGTATAGCT TGTGACGGAC TTATTGTTGA
AGTGGATAAA CTTGTCGTAC ATAACGATTT CTGGTTTGAT AATTTAAGTT TGATTAATTG ACAGTTTGCG GTTTATGGTT
TTGATTAGTT GAGTTTTAAT ATTGATTGTA CTGTCATGAT TTCTAAAGTA ATTATTATAA AGTTCACAAA TTTATCCGAC
ATGACGATTT CTGGGTTGAC TATACATCAT CGTTTCTGAT TAGATTATAA TTTCTGATTG TCAGACATGA CAATGACAAT
TTCTGGGGTG ACAATTTACA TCAGTACAAG GACTATTTAC TATTGTTAAT TATTGAATCT TAGGGTTAAT TGTTTGTGTG
ATTGGGATTT GCAGGCGCAC CGTGTGGCAC ACCTGTTGTG GCGGCAATCG CGGCGGCCGT TGGCATTGGC ACTGCACTCT
CGGATTGCTG ATGTGTTTGC GGTGGATATT CACCCGGCGG CGAGGATTGG GAAGGGGATT CTGTTTGATC ATGCCACTGG
GGTGGTGGTG GGGGAGACAG CGGTGATTGG GAACAATGTA TCCATTCTGC ACCATGTCAC GCTGGGCGGG ACTGGCAAGG
TTGGTGGTGA CAGGCATCCC AAGATTGGGG ATGGGGTGCT TATTGGCGCT GGTGCTACAA TTCTGGGAAA TATCAAGATT
GGGGAAGGTG CAAAGGTTGG TGCCGGCTCG GTGGTTTTGA TTGATGTGCC GCCAAGGACC ACCGCAGTTG GGAACCCGGC
GAGGTTGGTT GGTGGGAAGG AGACACCCTC TAAGCATGAG GATGTGCCTG GGGAGTCCAT GGACCATACT TCCTTTATCT
CTGAGTGGTC AGATTATATC ATTTGAATTT CCAAGGTTAA TCAATTAATT AATGAATACT CCAAATGAAA TACTATGTTG
TGCTGTTCTA AAGTTTTGTA ATTTTTTTAT GTTTGGATTG AGATTTTGTA CTCTACACTC TGTGCAAAGT GAAACTGTAA
TCGGGTCAAA TAAAGGTTTG ATGAGCAGCT GTATGAAAAA TTTGATCACT GCTTAGTATA CTGTATGTAT TATGAGTTGA
AGTTTTGGCT TGCTTGTTTG GTTATTGTAC CAGGACTCAG TTGTAAGCCC TAAATTTTCG TATCATTTCC CGTTGTATAT
GCTCAAGGAT TATACTATAC GATGGTATTT ATGCAGTTAT TGATATTTCC TATTACTGAA GTTTCATAAC AGAGGAGACA
GTCATTAGTT TTCTTCTTAG TGTTGTCTTG ACGCTCTCAA CTTGTGCATG TGTTCTCTAT GTTTGACAAA AAA

>Vigan.09G166600.01
ACAGGATTGC ATTAGGAAAC ATCAAGCGAA GAACAAAGGA ATATGAATGC TTTTGATTCG TGAATACCCA ACGAAGGAGT
GAATGGTTGT CTTGTCCCTC TTCGTTTCTT GGATCTTAAT CTTGTTTCTC ACAGTACCAC ACTTTTTTCA CAGCTTCTCA
ACCGCACAAA CCCCAACGCC AAACCATAAT CGCAACACAT CACCAAACAA TGCCGACGGG GCTACCGGCG GCGAACACCG
TCGTCTCGAG CGACGACGAG GGCTGGGTGT GGGCTCAGAT CAAGGCGGAG GCGCGCCGCG ACGCCGAGTC GGAGCCGGCG
CTGGCGAGCT ACCTGTACTC GACGATCCTC TCGCACTCCT CGCTCGAACG TTCTCTCTCG TTCCACCTGG GTAACAAGCT
CTGTTCTTCT ACGCTACTAT CCACTCTCCT CTACGACCTC TTCCTCAACG CCTTCTCCTC CGACCCCTCG CTCAGTTCCG
CCGCCGTCGC GGACCTCCGC GCTGCCCGCG AACGTGACCC TGCCTGCGTT TCCTACTCTC ACTGTCTTCT CAATTACAAA
GGCTTCCTCG CCTGCCAGGC GCACCGTGTG GCACACCTGT TGTGGCGGCA ATCGCGGCGG CCGTTGGCAT TGGCACTGCA
CTCTCGGATT GCTGATGTGT TTGCGGTGGA TATTCACCCG GCGGCGAGGA TTGGGAAGGG GATTCTGTTT GATCATGCCA
CTGGGGTGGT GGTGGGGGAG ACAGCGGTGA TTGGGAACAA TGTATCCATT CTGCACCATG TCACGCTGGG CGGGACTGGC
AAGGTTGGTG GTGACAGGCA TCCCAAGATT GGGGATGGGG TGCTTATTGG CGCTGGTGCT ACAATTCTGG GAAATATCAA
GATTGGGGAA GGTGCAAAGG TTGGTGCCGG CTCGGTGGTT TTGATTGATG TGCCGCCAAG GACCACCGCA GTTGGGAACC
CGGCGAGGTT GGTTGGTGGG AAGGAGACAC CCTCTAAGCA TGAGGATGTG CCTGGGGAGT CCATGGACCA TACTTCCTTT
ATCTCTGAGT GGTCAGATTA TATCATTTGA ATTTCCAAGG TTAATCAATT AATTAATGAA TACTCCAAAT GAAATACTAT
GTTGTGCTGT TCTAAAGTTT TGTAATTTTT TTATGTTTGG ATTGAGATTT TGTACTCTAC ACTCTGTGCA AAGTGAAACT
GTAATCGGGT CAAATAAAGG TTTGATGAGC AGCTGTATGA AAAATTTGAT CACTGCTTAG TATACTGTAT GTATTATGAG
TTGAAGTTTT GGCTTGCTTG TTTGGTTATT GTACCAGGAC TCAGTTGTAA GCCCTAAATT TTCGTATCAT TTCCCGTTGT
ATATGCTCAA GGATTATACT ATACGATGGT ATTTATGCAG TTATTGATAT TTCCTATTAC TGAAGTTTCA TAACAGAGGA
GACAGTCATT AGTTTTCTTC TTAGTGTTGT CTTGACGCTC TCAACTTGTG CATGTGTTCT CTATGTTTGA CAAAAAA

>Vigan.09G166600.01
ATGCCGACGG GGCTACCGGC GGCGAACACC GTCGTCTCGA GCGACGACGA GGGCTGGGTG TGGGCTCAGA TCAAGGCGGA
GGCGCGCCGC GACGCCGAGT CGGAGCCGGC GCTGGCGAGC TACCTGTACT CGACGATCCT CTCGCACTCC TCGCTCGAAC
GTTCTCTCTC GTTCCACCTG GGTAACAAGC TCTGTTCTTC TACGCTACTA TCCACTCTCC TCTACGACCT CTTCCTCAAC
GCCTTCTCCT CCGACCCCTC GCTCAGTTCC GCCGCCGTCG CGGACCTCCG CGCTGCCCGC GAACGTGACC CTGCCTGCGT
TTCCTACTCT CACTGTCTTC TCAATTACAA AGGCTTCCTC GCCTGCCAGG CGCACCGTGT GGCACACCTG TTGTGGCGGC
AATCGCGGCG GCCGTTGGCA TTGGCACTGC ACTCTCGGAT TGCTGATGTG TTTGCGGTGG ATATTCACCC GGCGGCGAGG
ATTGGGAAGG GGATTCTGTT TGATCATGCC ACTGGGGTGG TGGTGGGGGA GACAGCGGTG ATTGGGAACA ATGTATCCAT
TCTGCACCAT GTCACGCTGG GCGGGACTGG CAAGGTTGGT GGTGACAGGC ATCCCAAGAT TGGGGATGGG GTGCTTATTG
GCGCTGGTGC TACAATTCTG GGAAATATCA AGATTGGGGA AGGTGCAAAG GTTGGTGCCG GCTCGGTGGT TTTGATTGAT
GTGCCGCCAA GGACCACCGC AGTTGGGAAC CCGGCGAGGT TGGTTGGTGG GAAGGAGACA CCCTCTAAGC ATGAGGATGT
GCCTGGGGAG TCCATGGACC ATACTTCCTT TATCTCTGAG TGGTCAGATT ATATCATTTG A

>Vigan.09G166600.01
MPTGLPAANT VVSSDDEGWV WAQIKAEARR DAESEPALAS YLYSTILSHS SLERSLSFHL GNKLCSSTLL STLLYDLFLN
AFSSDPSLSS AAVADLRAAR ERDPACVSYS HCLLNYKGFL ACQAHRVAHL LWRQSRRPLA LALHSRIADV FAVDIHPAAR
IGKGILFDHA TGVVVGETAV IGNNVSILHH VTLGGTGKVG GDRHPKIGDG VLIGAGATIL GNIKIGEGAK VGAGSVVLID
VPPRTTAVGN PARLVGGKET PSKHEDVPGE SMDHTSFISE WSDYII*