Variant information

Chr09:30787657 - 30789649

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
30787808GA642566.771.00DOWNSTREAM(|833||None|Vigan.09G166500.01), UPSTREAM(|1078||None|Vigan.09G166400.01), UPSTREAM(|3119||None|Vigan.09G166700.01), UTR_3_PRIME(|296||None|Vigan.09G166600.01)Vigna nepalensis
30787968GT522397.771.00DOWNSTREAM(|993||None|Vigan.09G166500.01), UPSTREAM(|1238||None|Vigan.09G166400.01), UPSTREAM(|2959||None|Vigan.09G166700.01), UTR_3_PRIME(|136||None|Vigan.09G166600.01)Vigna nepalensis
30787976TC532344.771.00DOWNSTREAM(|1001||None|Vigan.09G166500.01), UPSTREAM(|1246||None|Vigan.09G166400.01), UPSTREAM(|2951||None|Vigan.09G166700.01), UTR_3_PRIME(|128||None|Vigan.09G166600.01)Vigna nepalensis
30788224TC441782.771.00DOWNSTREAM(|1249||None|Vigan.09G166500.01), SYNONYMOUS_CODING(SILENT|gcA/gcG|A247|None|Vigan.09G166600.01), UPSTREAM(|1494||None|Vigan.09G166400.01), UPSTREAM(|2703||None|Vigan.09G166700.01)Vigna nepalensis
30788648TG441794.771.00DOWNSTREAM(|1673||None|Vigan.09G166500.01), INTRON(|||None|Vigan.09G166600.01), UPSTREAM(|1918||None|Vigan.09G166400.01), UPSTREAM(|2279||None|Vigan.09G166700.01)Vigna nepalensis
30788746TA441713.771.00DOWNSTREAM(|1771||None|Vigan.09G166500.01), INTRON(|||None|Vigan.09G166600.01), UPSTREAM(|2016||None|Vigan.09G166400.01), UPSTREAM(|2181||None|Vigan.09G166700.01)Vigna nepalensis
30788892CT451874.771.00DOWNSTREAM(|1917||None|Vigan.09G166500.01), INTRON(|||None|Vigan.09G166600.01), UPSTREAM(|2035||None|Vigan.09G166700.01), UPSTREAM(|2162||None|Vigan.09G166400.01)Vigna nepalensis
30788931CG501897.770.98DOWNSTREAM(|1956||None|Vigan.09G166500.01), INTRON(|||None|Vigan.09G166600.01), UPSTREAM(|1996||None|Vigan.09G166700.01), UPSTREAM(|2201||None|Vigan.09G166400.01)Vigna nepalensis
30788991GT461882.771.00DOWNSTREAM(|2016||None|Vigan.09G166500.01), INTRON(|||None|Vigan.09G166600.01), UPSTREAM(|1936||None|Vigan.09G166700.01), UPSTREAM(|2261||None|Vigan.09G166400.01)Vigna nepalensis
30789496GA481902.771.00DOWNSTREAM(|2521||None|Vigan.09G166500.01), UPSTREAM(|1431||None|Vigan.09G166700.01), UPSTREAM(|2766||None|Vigan.09G166400.01), UTR_5_PRIME(|56||None|Vigan.09G166600.01)Vigna nepalensis
30789535GA512266.771.00DOWNSTREAM(|2560||None|Vigan.09G166500.01), UPSTREAM(|1392||None|Vigan.09G166700.01), UPSTREAM(|2805||None|Vigan.09G166400.01), UTR_5_PRIME(|95||None|Vigan.09G166600.01)Vigna nepalensis
30789536AG512266.771.00DOWNSTREAM(|2561||None|Vigan.09G166500.01), UPSTREAM(|1391||None|Vigan.09G166700.01), UPSTREAM(|2806||None|Vigan.09G166400.01), UTR_5_PRIME(|96||None|Vigan.09G166600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
30787844TTACAACTGAGTCCTGGTACAATAACCAAACAAGCAAGCCAAAACTTCAACTCATAAT562423.731.00DOWNSTREAM(|870||None|Vigan.09G166500.01), UPSTREAM(|1115||None|Vigan.09G166400.01), UPSTREAM(|3082||None|Vigan.09G166700.01), UTR_3_PRIME(|204||None|Vigan.09G166600.01)Vigna nepalensis
30787940AGCTA431868.731.00DOWNSTREAM(|966||None|Vigan.09G166500.01), UPSTREAM(|1211||None|Vigan.09G166400.01), UPSTREAM(|2986||None|Vigan.09G166700.01), UTR_3_PRIME(|161||None|Vigan.09G166600.01)Vigna nepalensis