GBrowse Details

Vigan.09G148500.01

Basic Information:
Name: Vigan.09G148500.01
Multiple alignment
Variant Information
Position: Chr09:28319951..28322415 (+ strand)
Length: 2465
Functional Information:
Description: Similar to Uncharacterized protein. [I1KIE4, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Short-chain dehydrogenase/reductase SDR (IPR002198)
Glucose/ribitol dehydrogenase (IPR002347)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.59,0.86,5.51,67.68,19.78,6.40,15.4 9,3.18
Automatic updates:
Name: NM_001289301 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max (+)-neomenthol dehydrogenase-like (LOC100801677), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:28319951..28320234 (+ strand)
Length: 284
Type: five_prime_UTR
Position: Chr09:28320235..28320254 (+ strand)
Length: 20
Type: CDS
Position: Chr09:28320364..28320610 (+ strand)
Length: 247
Type: CDS
Position: Chr09:28321054..28321128 (+ strand)
Length: 75
Type: CDS
Position: Chr09:28321532..28321708 (+ strand)
Length: 177
Type: CDS
Position: Chr09:28321894..28322274 (+ strand)
Length: 381
Type: CDS
Position: Chr09:28322275..28322415 (+ strand)
Length: 141
Type: three_prime_UTR

>Vigan.09G148500.01 class=Sequence position=Chr09:28319951..28322415 (+ strand)
TTCTTGCAAA TAGTAAATAT TTTATTCTTT TTCTATGAAA TTTATTTTCA ACTTTTTTGT CCTTTTCATT TGGCATGGAA
AGAAGCAAGA CATAATCGAC AAGCACTGTA AAATATTGTA GTTACAGACA CGCCGGCTTG AGCATTGGTA TTCTTAGTAA
TGAATAGGAA ACCATAATTT GTGGAATTCA TATTCAGAGC TCAAAGATAT GCATAAATAA CAACTTGGTA ACCATAACAG
GTTTGTAATA AGCTGCATAC CACAGTTCAG AGTTGAAACT GAAGATGGGG GAAGCTACAG AGAGGTATTC TTGCTTTTTT
TCTCGCAAGT TTCAAATACC AATTATATTG CTGCCCTCAA AATTTACATT TTCTGAGTCC TTTTGACCTT TGGGATGTGG
TTGAATTTAA CAGGTATGCA GTGGTGACAG GAGCAAATAA AGGGATTGGA TTAGAGATAG TTAGGCAGTT AGCTTCAGAA
GGAATAAAGG TGGTACTCAC TGCAAGGAAT GAAGAGAGGG GTCTTCAAGC ATTGGAGACA CTCAAAGCCT CTGGTCTTTC
TCATCTACTG TTGTTTCATC AGATAGATGT GGCTCATGCT GCAAGTGTAG CTGCTTTTGC AGATTTTATC AAATCCAAAT
TTGGTAAACT TGATATTCTG GTAAAATCAG ACTTTGATGC TTCTCTCTTT TGTTTGTTCT AAGTTAAAGT TTGTCTCATA
AATCTTCCGT GCTTAGGCTT CAGTTAAAAG TGAAAGACTT TTGAATATTT CTTATTATTC CTCTTTCTAA ATTTCCATAA
TTATCTCATC TCAAACAAAA GTTTTCTGTT TTTGCTCATT TGTTAAAAGA ATTCATCGGA TTTGGATAGA AATTGTTCAG
TGCTGTTGGT GAGTGCATTA ACCATTACTT TTAATGATAC TTTTAAGATA GAAGAGGCAC TAGAAGTTAA AAAGAGATTT
CATTGAATCA ATTTGACAGA TTCCTTTTAC ATCTAGTCAT TTGATTAGGA TAAATTTTTG TGATGGCTTG AAGGGAATCA
ATTCTTTACA TATGGTAACT TTTTGTGTTA GCATGTTTCA ATATGAAATG TTGTTCTATG CAGGTTAACA ATGCGGGAAT
CAATGGAGTT GTAATTGAAG ACAGAGACTT ATTCACTACA GTCATCGTGA ATCGTGGGGT AAGAATATAA GCGTGTTCTG
AAATCTAATT AATAGACATG GAAAGTTGCA GTGTCTAAAA GAGACCTAAA GTCTGCAACT TTTCTAGACA ATTTGAAAAT
CTAGATCCCA TCCCATGTCA ACTATTGAAA TGGTAAAAGT AGAGCTTATA AAGGCTTGGA AAATTCTCAT CTCATGAACT
TGCATTTGTT GTTAAGCCCA ACACAAAGTC AAGGAATTAT GAAAGCATTT TAACAACAGT TAAGGATTTT GGAATTGGCT
CTTCTTTTGC AGTGTTAATG ATTAGGTTAT CCTGCATATT GTTACTACAA CTCCATAGAT TTCTTGAATG TACAAGAGAC
TTAAAAAGTT ATGTGTAATT GTAGGATTTG CAAACCGTCA TTGAGCTGGC ACTGTTTTCA GGTGATACCA GATGAGGAAG
CAACAAGGGC AGTGACTCAA ACATATGAAT TAGCAGAAGA ATGCTTGCAA ATAAATTACT ATGGCGCTAA AATAACTATA
GAATCCCTTA TGCCCCTCTT GCAATTATCT GACTCTCCAA GAATTGTGAA TGTATCATCC ACTCTCGGGC AATTAGAGGT
AGGCAACAAC TTCTTCTGCA AATAACTTCA TCTCATCTGA ATAGTTAATG AATAGCCAAT CATATGTTAT GCAATGTAAC
CTTGAGTGTT TCAAAACTTT CCTGTAACAG ATATTAGTTT ACTATTGCAT CTTGTTTCCT TTAATTTTCT GAAGGTCTTG
TTGCTTGTTT ATGTAAAATT CAGAGTTTCC CTAAAGAATC ATGGGCAAGA GGAGTGTTGA GTGATGGTGA TAAGCTGACA
GAAGAGAAAG TGGATGAAAT AGTGAAGAAA TTTCTAAGTG ATTTCAAAGA AGGTTCATTA GAGAGTAAAG GGTGGCCAAG
GTATCTAGGT GCCTATATTG TGTCGAAAGC TGCTATGAAT GGCTACACGA GAATCCTTGC TAAGAAACAT CCTTCATTCT
GCATAAACAG TGTTTGCCCT GGTTACGTGA AGACAGATAT AACATCAAAC ACTGGTGTTC TAACAGTTGA AGAAGGTGCT
GCTAGTCCTG TCAAGCTTGC ATTGCTTCCC AATGGCTCTC CATCTGGTCT CTTCTATTTC AGAACTGATG TCGCTTCCTT
TTGATTTCTA TTTATGCAAT TTTCTGGTTT GCGGATAAAA CCAGTGATTT TACTTCTCAA TTGTTGAACC TGTTTCAAGC
ACATTATATC ATGTTGTATT AAACTTGTGT TGTTTGTATC TTAAAGTCTA AACTGTGTAT GCAAT

>Vigan.09G148500.01
TTCTTGCAAA TAGTAAATAT TTTATTCTTT TTCTATGAAA TTTATTTTCA ACTTTTTTGT CCTTTTCATT TGGCATGGAA
AGAAGCAAGA CATAATCGAC AAGCACTGTA AAATATTGTA GTTACAGACA CGCCGGCTTG AGCATTGGTA TTCTTAGTAA
TGAATAGGAA ACCATAATTT GTGGAATTCA TATTCAGAGC TCAAAGATAT GCATAAATAA CAACTTGGTA ACCATAACAG
GTTTGTAATA AGCTGCATAC CACAGTTCAG AGTTGAAACT GAAGATGGGG GAAGCTACAG AGAGGTATGC AGTGGTGACA
GGAGCAAATA AAGGGATTGG ATTAGAGATA GTTAGGCAGT TAGCTTCAGA AGGAATAAAG GTGGTACTCA CTGCAAGGAA
TGAAGAGAGG GGTCTTCAAG CATTGGAGAC ACTCAAAGCC TCTGGTCTTT CTCATCTACT GTTGTTTCAT CAGATAGATG
TGGCTCATGC TGCAAGTGTA GCTGCTTTTG CAGATTTTAT CAAATCCAAA TTTGGTAAAC TTGATATTCT GGTTAACAAT
GCGGGAATCA ATGGAGTTGT AATTGAAGAC AGAGACTTAT TCACTACAGT CATCGTGAAT CGTGGGGTGA TACCAGATGA
GGAAGCAACA AGGGCAGTGA CTCAAACATA TGAATTAGCA GAAGAATGCT TGCAAATAAA TTACTATGGC GCTAAAATAA
CTATAGAATC CCTTATGCCC CTCTTGCAAT TATCTGACTC TCCAAGAATT GTGAATGTAT CATCCACTCT CGGGCAATTA
GAGAGTTTCC CTAAAGAATC ATGGGCAAGA GGAGTGTTGA GTGATGGTGA TAAGCTGACA GAAGAGAAAG TGGATGAAAT
AGTGAAGAAA TTTCTAAGTG ATTTCAAAGA AGGTTCATTA GAGAGTAAAG GGTGGCCAAG GTATCTAGGT GCCTATATTG
TGTCGAAAGC TGCTATGAAT GGCTACACGA GAATCCTTGC TAAGAAACAT CCTTCATTCT GCATAAACAG TGTTTGCCCT
GGTTACGTGA AGACAGATAT AACATCAAAC ACTGGTGTTC TAACAGTTGA AGAAGGTGCT GCTAGTCCTG TCAAGCTTGC
ATTGCTTCCC AATGGCTCTC CATCTGGTCT CTTCTATTTC AGAACTGATG TCGCTTCCTT TTGATTTCTA TTTATGCAAT
TTTCTGGTTT GCGGATAAAA CCAGTGATTT TACTTCTCAA TTGTTGAACC TGTTTCAAGC ACATTATATC ATGTTGTATT
AAACTTGTGT TGTTTGTATC TTAAAGTCTA AACTGTGTAT GCAAT

>Vigan.09G148500.01
ATGGGGGAAG CTACAGAGAG GTATGCAGTG GTGACAGGAG CAAATAAAGG GATTGGATTA GAGATAGTTA GGCAGTTAGC
TTCAGAAGGA ATAAAGGTGG TACTCACTGC AAGGAATGAA GAGAGGGGTC TTCAAGCATT GGAGACACTC AAAGCCTCTG
GTCTTTCTCA TCTACTGTTG TTTCATCAGA TAGATGTGGC TCATGCTGCA AGTGTAGCTG CTTTTGCAGA TTTTATCAAA
TCCAAATTTG GTAAACTTGA TATTCTGGTT AACAATGCGG GAATCAATGG AGTTGTAATT GAAGACAGAG ACTTATTCAC
TACAGTCATC GTGAATCGTG GGGTGATACC AGATGAGGAA GCAACAAGGG CAGTGACTCA AACATATGAA TTAGCAGAAG
AATGCTTGCA AATAAATTAC TATGGCGCTA AAATAACTAT AGAATCCCTT ATGCCCCTCT TGCAATTATC TGACTCTCCA
AGAATTGTGA ATGTATCATC CACTCTCGGG CAATTAGAGA GTTTCCCTAA AGAATCATGG GCAAGAGGAG TGTTGAGTGA
TGGTGATAAG CTGACAGAAG AGAAAGTGGA TGAAATAGTG AAGAAATTTC TAAGTGATTT CAAAGAAGGT TCATTAGAGA
GTAAAGGGTG GCCAAGGTAT CTAGGTGCCT ATATTGTGTC GAAAGCTGCT ATGAATGGCT ACACGAGAAT CCTTGCTAAG
AAACATCCTT CATTCTGCAT AAACAGTGTT TGCCCTGGTT ACGTGAAGAC AGATATAACA TCAAACACTG GTGTTCTAAC
AGTTGAAGAA GGTGCTGCTA GTCCTGTCAA GCTTGCATTG CTTCCCAATG GCTCTCCATC TGGTCTCTTC TATTTCAGAA
CTGATGTCGC TTCCTTTTGA 

>Vigan.09G148500.01
MGEATERYAV VTGANKGIGL EIVRQLASEG IKVVLTARNE ERGLQALETL KASGLSHLLL FHQIDVAHAA SVAAFADFIK
SKFGKLDILV NNAGINGVVI EDRDLFTTVI VNRGVIPDEE ATRAVTQTYE LAEECLQINY YGAKITIESL MPLLQLSDSP
RIVNVSSTLG QLESFPKESW ARGVLSDGDK LTEEKVDEIV KKFLSDFKEG SLESKGWPRY LGAYIVSKAA MNGYTRILAK
KHPSFCINSV CPGYVKTDIT SNTGVLTVEE GAASPVKLAL LPNGSPSGLF YFRTDVASF*