Variant information

Chr09:28319951 - 28322415

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
28320015TC552276.771.00UTR_5_PRIME(|220||None|Vigan.09G148500.01)Vigna nepalensis
28320436AT431716.771.00SYNONYMOUS_CODING(SILENT|atA/atT|I31|None|Vigan.09G148500.01)Vigna nepalensis
28320533AC381663.771.00NON_SYNONYMOUS_CODING(MISSENSE|Ata/Cta|I64L|None|Vigan.09G148500.01)Vigna nepalensis
28320545CG361720.771.00NON_SYNONYMOUS_CODING(MISSENSE|Cat/Gat|H68D|None|Vigan.09G148500.01)Vigna nepalensis
28320548GT351591.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gct/Tct|A69S|None|Vigan.09G148500.01)Vigna nepalensis
28321001TA15274.770.33INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4974||None|Vigan.09G148600.01)Vigna nepalensis
28321010TC21328.770.38INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4965||None|Vigan.09G148600.01)Vigna nepalensis
28321017GT30418.770.43INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4958||None|Vigan.09G148600.01)Vigna nepalensis
28321476AT74391.770.20INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4499||None|Vigan.09G148600.01)Vigna nepalensis
28321519GC562263.771.00INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4456||None|Vigan.09G148600.01)Vigna nepalensis
28321788AT67724.770.39INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4187||None|Vigan.09G148600.01)Vigna nepalensis
28321799TC661630.770.59INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4176||None|Vigan.09G148600.01)Vigna nepalensis
28321822TA661746.770.65INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4153||None|Vigan.09G148600.01)Vigna nepalensis
28321840TC621738.770.68INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4135||None|Vigan.09G148600.01)Vigna nepalensis
28321867CG632887.771.00INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4108||None|Vigan.09G148600.01)Vigna nepalensis
28321880TG713095.771.00INTRON(|||None|Vigan.09G148500.01), UPSTREAM(|4095||None|Vigan.09G148600.01)Vigna nepalensis
28321994TA56537.770.39NON_SYNONYMOUS_CODING(MISSENSE|tTc/tAc|F207Y|None|Vigan.09G148500.01), UPSTREAM(|3981||None|Vigan.09G148600.01)Vigna nepalensis
28322004TA591267.770.59SYNONYMOUS_CODING(SILENT|ggT/ggA|G210|None|Vigan.09G148500.01), UPSTREAM(|3971||None|Vigan.09G148600.01)Vigna nepalensis
28322079GC793158.771.00SYNONYMOUS_CODING(SILENT|acG/acC|T235|None|Vigan.09G148500.01), UPSTREAM(|3896||None|Vigan.09G148600.01)Vigna nepalensis
28322136CT612290.770.97SYNONYMOUS_CODING(SILENT|taC/taT|Y254|None|Vigan.09G148500.01), UPSTREAM(|3839||None|Vigan.09G148600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
28320654TTGTAGCTGCTTTTGCAGATTTTA21879.731.00INTRON(|||None|Vigan.09G148500.01)Vigna nepalensis