GBrowse Details

Vigan.09G068800.01

Basic Information:
Name: Vigan.09G068800.01
Multiple alignment
Variant Information
Position: Chr09:9351977..9355028 (+ strand)
Length: 3052
Functional Information:
Description: Similar to Uncharacterized protein. [G7JUJ2, Medicago truncatula]
GO: Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome b5-like heme/steroid binding domain (IPR001199)
Cytochrome b5, heme-binding site (IPR018506)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.14,2.32,74.78,66.53,93.87,58.98,132.27,162.66
Arabidopsis thaliana homolog: AT2G32720.1
Automatic updates:
Name: NM_001249859 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cytochrome b5 (LOC100500611), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251267 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative cytochrome B5 isoform B (LOC100306652), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:9351977..9352216 (+ strand)
Length: 240
Type: five_prime_UTR
Position: Chr09:9352217..9352306 (+ strand)
Length: 90
Type: CDS
Position: Chr09:9354384..9354450 (+ strand)
Length: 67
Type: CDS
Position: Chr09:9354559..9354809 (+ strand)
Length: 251
Type: CDS
Position: Chr09:9354810..9355028 (+ strand)
Length: 219
Type: three_prime_UTR

>Vigan.09G068800.01 class=Sequence position=Chr09:9351977..9355028 (+ strand)
TTTTTTTTCG ACCACAGTAT TGAAAAGTGT CTGGGTTTGG TTGGTTTGAA AAAACCTTCC ACCTCACCAA CCCATTACTA
TCGTGTGCCA ACCAACCAAC AACATTTTAC AATTCATTTC TCACCAACCA CGTTTTTCAA TTCACTTCTC ACCAACTACC
TCTTATTCAA ATCCTCTCAA CTCTACCTTT AGGATTTGCT GAGAGAATTA ACATCGAGAG CTGCTATTTT CTGCTCAACA
ATGGGAGGGG AGAGCAACAA GGTCTTCACT TTAGCTGAGG TTTCTCAGCA CAATAATGCC AAAGATTGTT GGCTTGTCAT
TCATGGCAAG GTATTTTGCC TTCTGCTTTG TGGGTTTCGA TTTTAGATTC TGTTGGGTTG GCTGATGCTG TTTCAAACAT
TTACTTTTCC AGCTATCTTT TATTTGTCCA AACTAACTGG AGGACTAGGA TGTGTTAGAT CTCTCAAAGG GCTGAGATTT
GTTTCGATTT GAAGCATGTA AAGTGTTTCG TGTAATTTTT TTTTTAATAA TTATTCGTTT CTAAGCTGTA AGAAACCTAT
TAATTGTATC TGACTCTGGT AGTGATTGAT GAGGTTAACT GTCTTAAGGA TATACTTGTG TTTTTGAAGT TCAGTTTCTG
AAATTCTGTT GGTATTTCAC TATATAAATT GTATCTGACT CTGATAAGAA ACCTATAAAT TCTCTCTGAC TCTGGTAGTG
ATTGATGACA TTAATTTTCT TAAGGATATA CTTGTGTTCT TGAAGTTCAG TTTCTGAAAT TCTGTTGGTA TTTCACTACA
TATTCAGGTT GTGCATTTCT TGTTCTGGAT CATGATTGGA TGGTGGATTG TTGGGAGTTT TTTGTTATGA TTAATGGTGC
TTTTAGTCCA ATCTCTAAAT TTTGGTTTTA GTTCCCTAAT TTTTGAAACA TTGGTTGTAC AGGGAAAAAA GTGATAGCTC
TAGTGACTGT AGTTTGTAGT TTTAAAAAAA TACAAGGACA AAAACTATTG GTTTTAAAGT AAGGGAGTAA ACGTAAAACC
AAGATCCGGT AATTTTCGAG GATCTAAAAT TACCATTAAC CATTATTCTG AAAATGAACT GAATTTGGAT GGAATATCTG
GCAAATGGAG TGTCATTCGT AATTAGATAG TAGGTTACTT ATGCCATGTT GTGTTTCTTT AAGGCTATGT TTGTGAGTAT
AAAGTTGTTT TGAAATAGTA TGAAAGTTCA TCTCGGCTTT TATTCCTTCG TGGTTGACTT GTAAACTCTG GAAATAAGAA
AATTCCTTCG TGTTTTTTGT AAGTTTTGCA TTCTGTCCAT CCTACACCGA GAAAAAGCTT TGGAATTTTT ATTGAGTTTT
ACTGACATTG TCTTTGTGCA TGTTTCCCTA TATCCATTTT TACTGTCTTT GTCCATTGAA ATACACAGTA ATAATATCTA
GGAATGATTT GGATTCAATT CCACATTCTC GTAGATCATA AAAATTTCTA ATAATTTTGT GATGCTAGGG AGTACTGAGT
CATGTGCCTG TTAGGTTTAA GAAAATAGTC AGAATGAAAT TGCGTCATTT GTAAACTTGT TAGGGTAGAG ATTTAAGTTC
AGATTATATC AAGTTCTCTA CAAGTACTTG GAAGAAGAAA AGAGAGGTCA AATAAATCAC ACTTTTCATA TGTTAAAACC
AAGTTTAATC TAAAAGAATA CTAAAGTTTT AGTATCGGAC AAGTAGCTTA TCTTGTATAT GAGACTCCTA CCTAACATTT
TAAGATTCCT TTTAAGGGCT GATATCCAGG GAAGTTTTCC ACTCCATAGA CACTCTCAAC AAAAATATCA ATTGTTAGCA
CTTAAGTACA AAAGGAGAGC TTAACCCACT AATCCATTAG GTGCGAGAAC TTCACAGTTG AAGTATCTCA TCACATCAAG
TAGCTTATAT CCTACTACTC AAAATGGGAT TCCTAACATA GTATTTGAAA GTTAAGGTGC TCAAATTATT GTAACTTCTA
CTTGAGATAA ATTCTATTCA TTTTATGATT TAATATAAGG TTATAAGGTT GACTTAATGA TAAAAGTGGA AGGGAGGGTA
GGAGAGCTAT GGGTTCAACT CTTTCACTAA CACTTAGGAA TTACAAGGTT GGTTTTGGTG GGTTTGGAAA GAAAGGTGAG
AGAGGTTCTG GGTTCAACTC TCCTGATAGG CAAAGACTAA CAACTAGCAT TACCGATCTA AAAAGAAAAA TTATGATTTA
CTATAATTTT TTTCTAACTC AAAGTGTTTA TTAAAAAGCT TATCCAACTG GGCATTGGTG GATGGAATTA GATCTAAAAG
CTTTCCATGT AATATGTGCT AGTTGATTAG GAATCTTATG TTTTAGTGGC CATTGTTGCT CTCCTTCACC ATATCTTTGT
GAAACAGGTT TATAATGTGA CGAAGTTCTT GGAGGACCAC CCTGGTGGTG ATGATGTCCT CTTGTCTTCC ACAGGTATCA
AACCTTGTCT CTTAATGCAT TTAATTATTC ATCATTCCTC ATGATCGCAG TGAGGGGAGA TTTCTGCAAA TGGCTTATAT
CCAAATGACA CTTGTTTTGC AGGGAAGGAT GCAAGTAATG ATTTTGATGA TATTGGTCAC AGCACCAGTG CCGTAGCCAT
GATGGATGAG TTCTATGTTG GAGACATTGA TACATCATCC ATCCCCAGCA AGGTGGCGTA CACTCCTCCC AACCAACCTA
AGTATAACCA GGACAAGACA CCAGAGTTCA TCATCAGGAT CCTCCAGTTT CTAGTTCCCT TGCTTATCTT GGGTTTGGCA
GTTGGTATTC ATTTCTACAC CAAATCAAAA TAATCATATC CATCAATGCC TTTGCAATAA TGTGTTTCTG CAGCAATGAC
GAGGGGATGT GGGATATCAA TTGTGCTGGT TTCCCTTTTC AATGTAATCC GTTGTTAAAT ATCCACCGTC TTTCTGTCAT
TAGTTTTCTA AAGGAGTATT GTATGTTCAG CCATTCAAAC TTCTAAATTT TTTGGTGATT CTCAAACTTG CTTTTTGAAG
AAAAAAATGT TA

>Vigan.09G068800.01
TTTTTTTTCG ACCACAGTAT TGAAAAGTGT CTGGGTTTGG TTGGTTTGAA AAAACCTTCC ACCTCACCAA CCCATTACTA
TCGTGTGCCA ACCAACCAAC AACATTTTAC AATTCATTTC TCACCAACCA CGTTTTTCAA TTCACTTCTC ACCAACTACC
TCTTATTCAA ATCCTCTCAA CTCTACCTTT AGGATTTGCT GAGAGAATTA ACATCGAGAG CTGCTATTTT CTGCTCAACA
ATGGGAGGGG AGAGCAACAA GGTCTTCACT TTAGCTGAGG TTTCTCAGCA CAATAATGCC AAAGATTGTT GGCTTGTCAT
TCATGGCAAG GTTTATAATG TGACGAAGTT CTTGGAGGAC CACCCTGGTG GTGATGATGT CCTCTTGTCT TCCACAGGGA
AGGATGCAAG TAATGATTTT GATGATATTG GTCACAGCAC CAGTGCCGTA GCCATGATGG ATGAGTTCTA TGTTGGAGAC
ATTGATACAT CATCCATCCC CAGCAAGGTG GCGTACACTC CTCCCAACCA ACCTAAGTAT AACCAGGACA AGACACCAGA
GTTCATCATC AGGATCCTCC AGTTTCTAGT TCCCTTGCTT ATCTTGGGTT TGGCAGTTGG TATTCATTTC TACACCAAAT
CAAAATAATC ATATCCATCA ATGCCTTTGC AATAATGTGT TTCTGCAGCA ATGACGAGGG GATGTGGGAT ATCAATTGTG
CTGGTTTCCC TTTTCAATGT AATCCGTTGT TAAATATCCA CCGTCTTTCT GTCATTAGTT TTCTAAAGGA GTATTGTATG
TTCAGCCATT CAAACTTCTA AATTTTTTGG TGATTCTCAA ACTTGCTTTT TGAAGAAAAA AATGTTA

>Vigan.09G068800.01
ATGGGAGGGG AGAGCAACAA GGTCTTCACT TTAGCTGAGG TTTCTCAGCA CAATAATGCC AAAGATTGTT GGCTTGTCAT
TCATGGCAAG GTTTATAATG TGACGAAGTT CTTGGAGGAC CACCCTGGTG GTGATGATGT CCTCTTGTCT TCCACAGGGA
AGGATGCAAG TAATGATTTT GATGATATTG GTCACAGCAC CAGTGCCGTA GCCATGATGG ATGAGTTCTA TGTTGGAGAC
ATTGATACAT CATCCATCCC CAGCAAGGTG GCGTACACTC CTCCCAACCA ACCTAAGTAT AACCAGGACA AGACACCAGA
GTTCATCATC AGGATCCTCC AGTTTCTAGT TCCCTTGCTT ATCTTGGGTT TGGCAGTTGG TATTCATTTC TACACCAAAT
CAAAATAA

>Vigan.09G068800.01
MGGESNKVFT LAEVSQHNNA KDCWLVIHGK VYNVTKFLED HPGGDDVLLS STGKDASNDF DDIGHSTSAV AMMDEFYVGD
IDTSSIPSKV AYTPPNQPKY NQDKTPEFII RILQFLVPLL ILGLAVGIHF YTKSK*