GBrowse Details

Vigan.09G055400.01

Basic Information:
Name: Vigan.09G055400.01
Multiple alignment
Variant Information
Position: Chr09:7510569..7514203 (+ strand)
Length: 3635
Functional Information:
Description: Similar to Uncharacterized protein. [I1JLL6, Glycine max]
InterPro: Uncharacterised protein family UPF0497, trans-membrane plant (IPR006702)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.29,10.80,11.22,9.29,34.19,19.98,29.28,14.93
Arabidopsis thaliana homolog: AT3G53850.1
Automatic updates:
Name: NM_001248210 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MARVEL domain-containing protein (LOC100306188), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:7510569..7510878 (+ strand)
Length: 310
Type: five_prime_UTR
Position: Chr09:7510879..7511012 (+ strand)
Length: 134
Type: CDS
Position: Chr09:7512980..7513112 (+ strand)
Length: 133
Type: CDS
Position: Chr09:7513664..7513864 (+ strand)
Length: 201
Type: CDS
Position: Chr09:7513865..7514203 (+ strand)
Length: 339
Type: three_prime_UTR

>Vigan.09G055400.01 class=Sequence position=Chr09:7510569..7514203 (+ strand)
CCTCATTTCA ACTTTTTATC CCATAGTTAT TTTTGCATAA AGTAAAAAAA AAAGTGGGGG AAAGCAAAAA GATTCTGGAT
AACAGTAAGC AAGCATTAAC TTTTCCGTCG ATTCCCATCC ATTGCCACTA CTCTAAAGCT ATCTTCCCCA AATACTCATT
CTTTCGATTC TCATTCTCCT CTCTCTCAAA GCTGCTTTCA CAGAAACCCA ATTTACCTTG TCGGAGAGGG TGATAAACAG
AGGAAAATCT CCCCAATGGA AAGGCTCTGA AATTAGGGTT TTTTGGTTGA AGAAGAAGAA AAAGGAAGGG ATGATGAAGC
GGCTGTGGGG TGGGCCCGGA ACGATTAGCG GGTTCCTCTT GAGGTTTGGG CAATGTGCGT TTGGTGCCGC TTCAATTGCT
CTTATGGTCA CTGGTTTTGG CTTCTCTAGC TACACTGCTT TTTGGTATAC CACTGTTCTT CTATTTTTTT CCTTTTTATT
TTCATTTTGC CTTGAAAAAT AAGTTAAATT GAATCAAAGT TGATTATGTC TGTTGTTTTG AGGGTTTTCA ACTTTAGGGT
GTGATTGGAT TAGGGACGGG TCGGGTCGGT GGGGTGGGAG TTAATATTTC ATTTCTAAAT TTAGTGAAAA GAGTCTGTTT
GCAAAGGAAA AACTTCTATG TTACCATTTT TAGAAGTGGA AAATTAGAAG AAAAAAATGA AATCAATATT TCCAAATTGA
AATAGTTTGG TCTGTTTGGA GAAAATCCTC TAAAGGAACT TGGAAAAAAA GACTAACAAG AAAAAAAGTA AAATAAGTTT
TACCATGGTA AATTTAACAT ATTAAATAGA AAAATTGGAA AAGTTACATG AGGGAGTTTC TATGAATAAA CATGTGGAGA
AATTCGTTTA AGTTTTCTTT TTTCTTATTT TTTCTTTTAA GCAATCCCTA TTTTTGAGAT CATTTATAAA TGTTACTATT
TGTTATTTTC TTTATAATTT GATGTCTAAC ATTTTGTACA AATACAGCTG ATGCCACCAT AGTTTAGGAG ACTTTAAAAC
CCTATAGGTT ACGGCTAAAA TTGTAGATGT GGACCGAATT TTGAAAATTG AAATTTAGCA TTTGTGAATC ACATATAGTG
ACAATGATGT CACTTGGGAT TGAGGGTGGG GGTATCAAAC AAAATAGAGT GAGTGAAAAA TGGAATTTTC AGTTGACGGA
TGTGATGATG TTGTGTTGAA CATGAGCGTA GAAAATTGAA GGGTGAACTT TATGTGAAAA CTAGCTTGAA AAAGCTTTAT
TTTAATTGTG ATTTACCCCA AATTTATGGG CTGTCAAACT AATTCTTAAC AGTGAAGAGG AAGACAAAAC CGGGTAAGGT
GAGGTTTGCA CCCACTTATA TATTACAAAT TGATCTTATT TATAGTCGAT GTAGGACTTC CAACACATCT CTCTCACGCT
AAGGTATATA CATCTCGAAC ATGAGACTAG ACATTAATGG GTGGTCCGAT AACGGCCCGA TAGCGGGTGA AACAATATGT
CCAACAAACA ACAAATATGG TTAGGATAGG CTCTAACCTG ACTCTGATAT CATGTTAAGA AATGGACTTA AAGCCTAACT
CAATCCCACA AAACCGGCTT GTAAGGTGAG GTTTGCACCG ACTTATATAT TATAAATTGA CCTTATTTTT AATCGATGTA
GGACTTCCAA CATCTAGTAG GAGAGATTCT TAGCTGGTTG CTCAAGGAGT TAGGGTTTGA GGTGAACTGA GTCATGTGGC
CTAAAATATT TCTATGTTTT TTCCTTTAAG GTTTGTTGGG CTCCAATTTG AGTCCAGCTT AGTTTTTCTA GTTCTTTTTT
TATTTTATTT AAAGCATAAC ATAATATATA ACTAATGTAC CCTAGCCTCT AAAGGCTCCT TGCTATGCAA AAGTATGGGG
ATGAGTCATT GTACCCGACC TTACCATTGC ATCCGTGAAG TGATGGTTTT CGTATTCCAA TCCATGACCA ATTAATCACC
AAGGCACATC TTCTGTTGTA CCTAGGCTCA CCTATCATAA CATATAAACC AAAACTAACA GTGACCAAAT ACTCAATAAA
CCTTAACATA CTCTGATTTG CTCTAGAAAT TAGCTGTATT GTTTTTGTCT TGTTCCAAAT ACTACTGATA TCGTGATGGT
TTTTATATAG TCAGTATCGT GATGCTTTGT TGATTGTTTT GAAATTGAGC AACTTGAGTG TTTAAGTCCA ATGCACTGGA
TTCTGAGATA ACATTATCTA CCGGTTAAAA GTATACTACT TAATGTAATT TTCTTTTTAT TTGTCTATTA AGTATATTAA
ATTGAAAGCG ATGCCTTTCT TTTTGTTTTT GTCTATAGAT TGTCATATTT TCTTTTAAGC ATAATTCAAT GGCACTTCCT
TGCGCTTTCA GTTATTTAAT TGCATCAATG GGACTTCAAT TTCTTTGGAG CTTTGGACTT GCATGTCTTG ATATTTATGC
CTTGAGGACA AAGAGAGACG TGCAAAATCC AATTCTTGTC AGCCTGTTTG TTGTAGGCGA TTGGGTAATA CCACTCTCCT
CATCTTTTTA TTTTCGTGTA GAAAAATAAA TTCAGTCACG AGCATGCCTA GACACTGAAC ATGAATTCAA CTTCTATGGT
TCGTATTACC AAAAACTTGG ACAGTTAGAA ATACATGGAG TTAATTATTT TTGAATTGTG AATGTTAGTG TAACTTCGAG
TTTTGTGAGA TCCTATTTAA GCTGCAACAT ATAAACTAGT CAGTACGTGT CAATTGCAGC TTCATGTCTC GGTCAGGTTT
GTAAACATAA TATGCTTGTT AAAGAATGGC CAAACTTCAA TTGAACATCA TTTGCTCATT TATCAACCAT GTAGCAATAC
AAAATAGTGT TTCTCTATTT GATTTATCTA ATGGGGCAGG TGAAAAACTA AAACCTTATA GACAAGTCTG GCCTTCGATT
TCTGTTTTTT TTTTGTAATA ATAATGAGAT TGGAATCAAT ATTTCCCTTG TCTATGGCCA CTTTGTTTTA ATATTCTGAT
TGAAAATTGA TGTGATAAGC TGGTGGGTCA TATCATAGTG ATTTATGAAA TGCAGGTAAC AGCAACTTTA TCACTAGCAG
CTGCATGCTC GTCAGCGGGA GTTGTAGTAT TATACTCAAG AGACCTTAAT ATGTGTGCGA CTACTAAGCG TCTCACATGC
AACAAGTATC AGATTTCTGT AGCCATGGCT TTTGTCACCT GGGTTCTTAC AGCAATGTCA TCGCATGTGA TGTTCTGGAT
CTTGGCCTCA GTCTAGCTTA ACGTATTTCC TTTGCTAGAT CCCAAGACCA CCATAGATAT CAAGGTATCT TGTTGTAAAT
TTTGTTGTAT CAATACTTGC CACGACATGT AGGCAAATTT TTCCATGTTT TCCCTTCTCA AAACTATGAT TGATTTTTCA
TTTTTCAACC TTGCCACGCC AACCTCAGTC CTAGATATAG TTGCTGGTTT AATGTAAAAG CTTGGACATG ATTCCGTAAA
CTTACTTCCT TATTGTAACC AAGATATTCT CCTTATGCTG GGTGCATGCG TTTGTATATA ATCTTGTTCA TTTACCACCT
CTAGCCACAT TCCTTAGTAC TATAACTTAA AAACC

>Vigan.09G055400.01
CCTCATTTCA ACTTTTTATC CCATAGTTAT TTTTGCATAA AGTAAAAAAA AAAGTGGGGG AAAGCAAAAA GATTCTGGAT
AACAGTAAGC AAGCATTAAC TTTTCCGTCG ATTCCCATCC ATTGCCACTA CTCTAAAGCT ATCTTCCCCA AATACTCATT
CTTTCGATTC TCATTCTCCT CTCTCTCAAA GCTGCTTTCA CAGAAACCCA ATTTACCTTG TCGGAGAGGG TGATAAACAG
AGGAAAATCT CCCCAATGGA AAGGCTCTGA AATTAGGGTT TTTTGGTTGA AGAAGAAGAA AAAGGAAGGG ATGATGAAGC
GGCTGTGGGG TGGGCCCGGA ACGATTAGCG GGTTCCTCTT GAGGTTTGGG CAATGTGCGT TTGGTGCCGC TTCAATTGCT
CTTATGGTCA CTGGTTTTGG CTTCTCTAGC TACACTGCTT TTTGTTATTT AATTGCATCA ATGGGACTTC AATTTCTTTG
GAGCTTTGGA CTTGCATGTC TTGATATTTA TGCCTTGAGG ACAAAGAGAG ACGTGCAAAA TCCAATTCTT GTCAGCCTGT
TTGTTGTAGG CGATTGGGTA ACAGCAACTT TATCACTAGC AGCTGCATGC TCGTCAGCGG GAGTTGTAGT ATTATACTCA
AGAGACCTTA ATATGTGTGC GACTACTAAG CGTCTCACAT GCAACAAGTA TCAGATTTCT GTAGCCATGG CTTTTGTCAC
CTGGGTTCTT ACAGCAATGT CATCGCATGT GATGTTCTGG ATCTTGGCCT CAGTCTAGCT TAACGTATTT CCTTTGCTAG
ATCCCAAGAC CACCATAGAT ATCAAGGTAT CTTGTTGTAA ATTTTGTTGT ATCAATACTT GCCACGACAT GTAGGCAAAT
TTTTCCATGT TTTCCCTTCT CAAAACTATG ATTGATTTTT CATTTTTCAA CCTTGCCACG CCAACCTCAG TCCTAGATAT
AGTTGCTGGT TTAATGTAAA AGCTTGGACA TGATTCCGTA AACTTACTTC CTTATTGTAA CCAAGATATT CTCCTTATGC
TGGGTGCATG CGTTTGTATA TAATCTTGTT CATTTACCAC CTCTAGCCAC ATTCCTTAGT ACTATAACTT AAAAACC

>Vigan.09G055400.01
ATGATGAAGC GGCTGTGGGG TGGGCCCGGA ACGATTAGCG GGTTCCTCTT GAGGTTTGGG CAATGTGCGT TTGGTGCCGC
TTCAATTGCT CTTATGGTCA CTGGTTTTGG CTTCTCTAGC TACACTGCTT TTTGTTATTT AATTGCATCA ATGGGACTTC
AATTTCTTTG GAGCTTTGGA CTTGCATGTC TTGATATTTA TGCCTTGAGG ACAAAGAGAG ACGTGCAAAA TCCAATTCTT
GTCAGCCTGT TTGTTGTAGG CGATTGGGTA ACAGCAACTT TATCACTAGC AGCTGCATGC TCGTCAGCGG GAGTTGTAGT
ATTATACTCA AGAGACCTTA ATATGTGTGC GACTACTAAG CGTCTCACAT GCAACAAGTA TCAGATTTCT GTAGCCATGG
CTTTTGTCAC CTGGGTTCTT ACAGCAATGT CATCGCATGT GATGTTCTGG ATCTTGGCCT CAGTCTAG

>Vigan.09G055400.01
MMKRLWGGPG TISGFLLRFG QCAFGAASIA LMVTGFGFSS YTAFCYLIAS MGLQFLWSFG LACLDIYALR TKRDVQNPIL
VSLFVVGDWV TATLSLAAAC SSAGVVVLYS RDLNMCATTK RLTCNKYQIS VAMAFVTWVL TAMSSHVMFW ILASV*