GBrowse Details

Vigan.09G047700.01

Basic Information:
Name: Vigan.09G047700.01
Multiple alignment
Variant Information
Position: Chr09:6325576..6331694 (+ strand)
Length: 6119
Functional Information:
Description: Similar to Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. [B9GQL5, Populus trichocarpa]
InterPro: Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 (IPR003397)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.57,4.87,5.75,4.95,10.85,5.33,7.53,6.11
Arabidopsis thaliana homolog: AT3G25120.1
Automatic updates:
Name: NM_001249071 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526920 (LOC100526920), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:6325576..6325721 (+ strand)
Length: 146
Type: five_prime_UTR
Position: Chr09:6325722..6325842 (+ strand)
Length: 121
Type: CDS
Position: Chr09:6326458..6326571 (+ strand)
Length: 114
Type: CDS
Position: Chr09:6330132..6330236 (+ strand)
Length: 105
Type: CDS
Position: Chr09:6331125..6331405 (+ strand)
Length: 281
Type: CDS
Position: Chr09:6331406..6331694 (+ strand)
Length: 289
Type: three_prime_UTR

>Vigan.09G047700.01 class=Sequence position=Chr09:6325576..6331694 (+ strand)
TCTTCACAAA GTTACCCTCT CACTAGAAAC TTGATTTGGG AGTGACACAG AGAAATCAAC CACTGCACCA TAAACCCTTC
AAATCAAATC GAACAAAACC TTACAACACA ATCGTGGATT GAAAACAAAT AATCCGAAAG AAAAAAATGG GCTCTAAGAA
TGAAGAAGCT TCAGACGAAG GACCTAGCAA TTCACCTCCT TCTTCTTCTT CGTCTCCTTC TTCTCATGCT TGGAAAACTC
GAATCGTTAT TCCAACCCTC CTCGCAGGTC TCTCTCCCTT TCTCTCTTTT ATTCTGTTGC TTCTTTTATT TCTCCAATGT
TTTTTCATCG GATCACCATT CCCACGATGA ACACTAGTTT TATTTAATAC CTATGGAATT TGTGTTTTGC ACAAAAGAGT
TGATTTTTCA CAACGTGGTG ATCCTTTTTT GTACTGGAAA ATGTGACATA TTTAGTGTCT CGAATAAGAA GATACATGTG
GTTCTCTAGA AAAGTTAGAG GAGCTAATTG GTGTTCTATT TACATATAAT TAAGACAATG TTTTAGTAAT GATTAGTTAT
TTACCTTTCA GTCACTATAT TTCAAAATTG TCCATTTTAT CTTTATATAT ATATATATAT ATATATATAT ATATATATAT
ATATATTTTC TATTTTAATC GTTTAGTCAA AGTTAAGATG GCAGGGGCAA AATGAAATTG TAGTAGTATG CATAAGGAGT
AAAGATGATA AAAGTAATGT GTGTAGGGAT CAAAATGGAT GATTAAATGG CGTGTGACAT CAATGTTGCA AATTTATATT
AGATTGAGGA TTTGGGTGGG GATAGAGACT GAAAGAGGAT AGAGTGTTTG TATTTATGAT GTTTGTGATT CTTTGGGAGC
AGGGGTTGCT GGAGCTGGAA TTGGGTTGAT TTCAAAGCAT CGAAAAACAC TTGGTCTTGC TAATGTGTGT TCTAGCTATG
CTGCAAATTT CGCCATCGTC ACAGGGTGCT ATTGTGGTAA TTGTTGGATT TTCTTTTGAT CTGATTCTCT GCTTTTCAGT
TTGGAGTTAT GTTGTTGTAT TTTGTATTGA TACCATTGTT TGTGTTGATT ACTGTGGCGT GCTTTGAATC CATGAATTTA
TTGATTTGCT ATGGTTTCTT ATAGATTTGG ACCCTCCTGT TTTTTTAACA CGAGAGTAAC ATATTATGGG GGACAGCCTG
TGAAATTTTG TTGCTGAGGC AGAAGAAGTT GATACCTTCT CCTCATAATG TTTTACCTTG ATTTTCTGAA AAGAAATGAG
AACATCCATT ATAGGGTTGG AGATTTTATA TGTAACTATG AAAAGAAAAA TATGGCCTCA GTATTGGGGA GGAGTGTTTG
TGTTACTGGC CTGTATTTGC TGCGATTTAT TTTTAGTATA GCCCTATTAA TACGCCCTAC TTATAAATAA GTGAAATATG
CTATATTGTG TTATAGAGAA TCCAGCCATA AATTGGAGCA TGGGGGTGAC CTCCATTTTC CCCCATCACC TCATATATAC
ATTTACTGTT AGCCTTATGG AAAATTTTGA TGAAGTAGAT TGGTAAAATT TGAAAATGGT TTAGTGCGGT AACATTTTAT
CTATCAGAAG TAACATACCT TCATAAATAA TAGGAAGGCT ATTATTTAGA TTTGCTGTGA ATTTAGAAAT GACTACAGCT
TTTTGAATTA GCAAATCTTT ATTATATTAT ATTTAAATTT TTGGCAGGGT TGTTTATACT TCAATGGCAT TATGTTATGA
AATTCTTAAT TAATTACTAA TAATACCCAG GAAAAATGTA TTTTCCGTTT GGAAGTTTGT TTCCAAAAGA ATACTTTGTT
AATCAAACAA GTGCTTTGTT ACTGAGTATT AATTTTATAA AATGTTTCAC AGATTAAATA ATCTAATAGT AATAGTTATA
GTAACTCTTT GTCTGTAAAC CCCATTTTGT TTATCTATGT GGATGTGATA TTGGTATCAG TATCATCTAG TGAATTGTCA
TAGAGTGTGA CACAGTGAGT TTTCAACTCT CAGAAGTGAT GTTATGATAT GGATTTGGAT ACTATTGAGT GTCTAAATTC
CACATTAAGT AATGTAAGAT GTTATGTAAA ACATTTAATT GCTTGGTTTT TCCTCTATAA TCCTTATCAA ATTGAGGCTC
TAGAATATTT GATTTTATCT TTGGACATAA TGTGTCAATT GCAAAGATTC AACACCAATT TGTCTATAAG AAATTTTGTT
AAGATATAAT GCTGAACCCA TGAATTTATC TTGCTCTCCT TGTGGGAATT TTCTAGGAGC CATGAATTGA AAAGAGAAAG
AAAAGAAAGA TTTTTATTGA ATAGAATGAA AAGAATGAGA AATTGGACAG CACTCTCTCC TCCAAGTTTT CACCCTTCAA
TAACAAATCT CCCTCTCTCC TATCTTTCTT CCCCTATGTT TGTCTTACTA CCCCTCTAGC TAACTAACAT TAGTATTCTA
ATTATCCTAA CTAATTTCTT CTCATCCTTA TATCCTGACA ATACACTCCT CCAATATCAA CCTTGTTCTC AAGGTTAGAA
TGGTGGAAGC TTGATCTCGT GGCTCTTCAT AATCACCATG ATCTTTACCC ACTCTTCCTA GAAGTAATTG CAATGCTTTC
CTGGTGGCAT GAATGATGGT GGAGATAAGG GTGGCTTTTG TATAACAGCC TTTGAACCTT CCTTCTGCCT TGGCTCCATT
GCCGAGCTGT CATAGATGCA ATGAAGTTTA ATGCTGAAGG CTCTCCTAAC AATTTGAGAT TCCAGGATTC CAATGTTATT
GATGTAACTC TTTGTATTTA AGAGCATAAC AGTCAAGATG TCATTATTCG ATTGTAACTT GGTCACCTAG CCTATGTCAT
GGGACAATTG ATGCACCCTG CAAAAATCTC TCCCTCAGCA ATTGTTCCAC TAGGAATCAA ATTCTTTGAT TGTGACTTGA
CCTACCTAGC CTCGGGATTA TTGTGCAACC TACGCAACAA TATCCCATTG AGCAATTGCT ACATCGGAAA TTGAACTTGT
TATCTTGGCT TTAATAATAA TTATTGGATC AAATGTTGAC CACTAGGCCA AAAGCTATAG TTGATAATCA AGGTGCAACT
CTTTTTACTT ATGAGCGTAG TGGTCCAAGT ATCACTATTT GATTGTGACT TGACCCACTT GTCCTATACC TCAAGACAAT
TGATGCACCC TGCAACAATC TCCCCCTTAA CAATTATTCC ACTAAGAATC AAACTTTTCG ATTGTGACTC AGTCCACCTG
GTACAGTAGA GGATAATTGT GCAACTTAAC ACAATCTCCC TTCAAACAAT TGCCTTACTA GGAGTCAAAT TCATGACATT
GACTTAGATA TCAATTGTTG GATCAAATGT TTATCACTAC GTCAAAAGTT ATAGTTGATA GTCAAGAAGA AACTCTTTCT
ACTTAAGAGA ATAACCACCC AAGTGTCACA ATTCAATTGT GACTTGGCCT ACACCGTGGG ACAATTGATG CATTTTGCAA
CACACTATGA GTTTGATTCT TGGTTAGTGA GCCTTTTTTA CTTCTACCTT TTGATTTCAA GAAATGAAAT ATATTTCTAT
CACACTCGGC TGCCACTCTT TGAATCAATT TACCCTTTTA TGCTTCCATT AAAGGTAAGC TGTTCAAACA TTTTCACCAA
GAGCTAGCTT TTGCTTCAAT GCATTTTGAC CCACTTCCCT CCGTGCTATT TTTGTTGCTC TGTCAAATAT GGATCACCCT
CTTCATTCAA TATCTTTTGC AGCATGTGCT TCAAATTTAA AATGTTGGCC CTCTCTTTCA AGAACGTTGA AAGTCTTCAT
TTCTTTGCAG TAAGTTTCCA TCTTAGTTTG CTCTTGCATT ATGGCAGCCA ATCTTTCAAA GATGTGGCTA CCATATCTAT
CTTTGAATCT TTTTATCGTA GCTGTGAAAA ATGATCCCCA GTCTGAATGT GTTATCTTGG TGCCAATAAT ACAAACTAAG
TATCGCCACA CCGTCCGTGT TCTTGAATGT GTGTTGCAGC TCGTGGATGA ATGAATATCT TGTACCACAG TATTTTTCAA
CCATAACCAA TTGGGTCTAC CCACTCAAAT GTTGATTGCT CTTTTCTGCC AAATGCCTCC ATCTCTAACA CTTGCTCTTC
CTTGAAGATC CGATAAGCTG GACCAATTTG GTAGGAACCA AGAATTGAAA ACAGAAAAAA ATAGAAATAT TTTTATTGAA
TAGAATGAAA AGTACTTGAA ATAGGAGAGC ATTTTCTCCT CCAAGGGTTT CTCCTTTACA AAGGATTAAA AACAACAAAC
CTCCCTTTCT CCTATATTTC CCTTATTTAT GTCTCACTGC CCACTAAGCA ATCTATTAAT TTTCTAACAA TCTTAACTAA
TTTCTCCTTC TCTATCCTAA CAGAATTAAA TTGTAACCCT CCTCTGTGTA GATAAGTTGA TTGATTCATT AGATCCTAGG
TTGGGAATGG GGCTCGAACC CTAGTAGATG ACTTCTTACC TAATTTAATA AGATCCAGTT CTGTCTAATT TGTTAGGTGC
ACGAGAATTT GTGGCTGCAA CTAGAAAAAC AGGACCTGAC GACATATGGA ACTCTGGATT AGCTGGATTT GGAACTGGTG
CTCTTCTTGG GCGACTGCAA GGTTTAGTTC TGCCCCTCTC ACTATTGCTG CGTTCTTGTG ATTTTTGTCA GCCATTAACC
ATGGTGAATT ATCTATCTGT TCTTCACCTT AACTTTTATT ATGTATTTTA AAAAGAATTT TCTCTTGGAT CTTACTCTCC
GTTACACTTT TTTTTTTTGT ATTTTGTGTT AACTATTTGC TGCAACTTGT TACATATATC ATTTATTCAG GACATTTAAT
CCTTCTCAGC AATTTAGACT GAAATAACTT TGCTTGATGA GATCTGAATT GTTTCCATTT TCAGTTTTCT TTCTCAGTTG
TTTTTCTTTT TTGTCTGTGA AATCTTTTTC TGATTTCTTA TGTTTTTTCT AATGATTCCT ACATTGTCAT AAAGTTTTGT
AATAATACCT AAAGCATGTT TTTCACTAGG GTAGTCAATG ACAAATGGAT TTCTTTTAAA AATAGAAATT GATCAATATT
TTTATCTTAA AGAACTTGGA CGTGCTATAG CATTGTCAAT TACTTACAAG GAAGTAGAAG ATGTATCATG GTTATTCCAA
ATACATTTTT ATTTTTTTTT ATCTTAGATT GCCTCGTATT TTTAATATTC TAAGGGTAAG GTTCTTGGAG ATTACCACTG
GGATTGATAT GGAAGTTACA CACCCTTGGA GAGGATGAAA GTAATGTTGA GAGCGTCTCT TAAATCTAAT GCTACCCAAG
GGATTAGTCT CATGAAAATG CTTGTGGGAA TAATTTGGTC AAAGAGAGAG TTTTCCCAGA TTGTTTAAAT TTTGATAAAT
GCATTATTTG AATGTAAATT GAATGTAATA ATTCTTGCTT AAATGTGGTC AATAGTTACA GAGGATCGGT TACAAGCCCT
GAAAATTGAT TTCACTTGTG AAATTTTAGG TGGTCAACTG GGTGCAATCC GGTACTCTGT CGTCTTTGCT GTTGTGGGGA
CAGCGGCAGA CTTTACTTAT TTGAAATCGA AAGATGCTTT GAGAGATTAC ACTAAAACAA TATACCAAGA CATTGAGAAT
TCAAAAAACA GTGGATCTTG GTTAAAATTG CCAGAATGGT TTCCAGTTCA AGTACTCGAT GAGGAAGCCC TTGCTGCTAA
ACGAGCTCAG GAAGAGCAAT TCCTTCAACA AAGGGCAAGG ATCCGCAACC TTAAAGAAGA AGAACCTTGA GAACTAAATT
TTTGTGGATG TTTGCCTGAT CCTTGAGCGA GGCAAACTTT CACCACGTAA AGCATTTTGT ATACCCAATT TTATTTTATT
TTATTGAGTT AGTTTGTAAT AATGTACTTT TCAAGCTAAA AAGCAATGGC TTCAGCTGAG ATTTTGAAAA TGTTGAGATT
GAAATTCATG TACTCATTTG GATTGTCTAA TGATTTTTCC CTTCTCAGGG TAGACAATGT CCAATTACTA TGTGAGGAAA
ATCTATAAAA GTATAAATGT TGTAGTTTGA CTTATGCAA

>Vigan.09G047700.01
TCTTCACAAA GTTACCCTCT CACTAGAAAC TTGATTTGGG AGTGACACAG AGAAATCAAC CACTGCACCA TAAACCCTTC
AAATCAAATC GAACAAAACC TTACAACACA ATCGTGGATT GAAAACAAAT AATCCGAAAG AAAAAAATGG GCTCTAAGAA
TGAAGAAGCT TCAGACGAAG GACCTAGCAA TTCACCTCCT TCTTCTTCTT CGTCTCCTTC TTCTCATGCT TGGAAAACTC
GAATCGTTAT TCCAACCCTC CTCGCAGGGG TTGCTGGAGC TGGAATTGGG TTGATTTCAA AGCATCGAAA AACACTTGGT
CTTGCTAATG TGTGTTCTAG CTATGCTGCA AATTTCGCCA TCGTCACAGG GTGCTATTGT GGTGCACGAG AATTTGTGGC
TGCAACTAGA AAAACAGGAC CTGACGACAT ATGGAACTCT GGATTAGCTG GATTTGGAAC TGGTGCTCTT CTTGGGCGAC
TGCAAGGTGG TCAACTGGGT GCAATCCGGT ACTCTGTCGT CTTTGCTGTT GTGGGGACAG CGGCAGACTT TACTTATTTG
AAATCGAAAG ATGCTTTGAG AGATTACACT AAAACAATAT ACCAAGACAT TGAGAATTCA AAAAACAGTG GATCTTGGTT
AAAATTGCCA GAATGGTTTC CAGTTCAAGT ACTCGATGAG GAAGCCCTTG CTGCTAAACG AGCTCAGGAA GAGCAATTCC
TTCAACAAAG GGCAAGGATC CGCAACCTTA AAGAAGAAGA ACCTTGAGAA CTAAATTTTT GTGGATGTTT GCCTGATCCT
TGAGCGAGGC AAACTTTCAC CACGTAAAGC ATTTTGTATA CCCAATTTTA TTTTATTTTA TTGAGTTAGT TTGTAATAAT
GTACTTTTCA AGCTAAAAAG CAATGGCTTC AGCTGAGATT TTGAAAATGT TGAGATTGAA ATTCATGTAC TCATTTGGAT
TGTCTAATGA TTTTTCCCTT CTCAGGGTAG ACAATGTCCA ATTACTATGT GAGGAAAATC TATAAAAGTA TAAATGTTGT
AGTTTGACTT ATGCAA

>Vigan.09G047700.01
ATGGGCTCTA AGAATGAAGA AGCTTCAGAC GAAGGACCTA GCAATTCACC TCCTTCTTCT TCTTCGTCTC CTTCTTCTCA
TGCTTGGAAA ACTCGAATCG TTATTCCAAC CCTCCTCGCA GGGGTTGCTG GAGCTGGAAT TGGGTTGATT TCAAAGCATC
GAAAAACACT TGGTCTTGCT AATGTGTGTT CTAGCTATGC TGCAAATTTC GCCATCGTCA CAGGGTGCTA TTGTGGTGCA
CGAGAATTTG TGGCTGCAAC TAGAAAAACA GGACCTGACG ACATATGGAA CTCTGGATTA GCTGGATTTG GAACTGGTGC
TCTTCTTGGG CGACTGCAAG GTGGTCAACT GGGTGCAATC CGGTACTCTG TCGTCTTTGC TGTTGTGGGG ACAGCGGCAG
ACTTTACTTA TTTGAAATCG AAAGATGCTT TGAGAGATTA CACTAAAACA ATATACCAAG ACATTGAGAA TTCAAAAAAC
AGTGGATCTT GGTTAAAATT GCCAGAATGG TTTCCAGTTC AAGTACTCGA TGAGGAAGCC CTTGCTGCTA AACGAGCTCA
GGAAGAGCAA TTCCTTCAAC AAAGGGCAAG GATCCGCAAC CTTAAAGAAG AAGAACCTTG A

>Vigan.09G047700.01
MGSKNEEASD EGPSNSPPSS SSSPSSHAWK TRIVIPTLLA GVAGAGIGLI SKHRKTLGLA NVCSSYAANF AIVTGCYCGA
REFVAATRKT GPDDIWNSGL AGFGTGALLG RLQGGQLGAI RYSVVFAVVG TAADFTYLKS KDALRDYTKT IYQDIENSKN
SGSWLKLPEW FPVQVLDEEA LAAKRAQEEQ FLQQRARIRN LKEEEP*