Variant information

Chr09:6325576 - 6331694

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6326210AT421941.771.00DOWNSTREAM(|4040||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6326212AT431906.771.00DOWNSTREAM(|4042||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6326214AT431951.771.00DOWNSTREAM(|4044||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6326218AT432037.771.00DOWNSTREAM(|4048||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6326220AT452038.771.00DOWNSTREAM(|4050||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6326958CT411630.771.00DOWNSTREAM(|4788||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6327206TC552200.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6327507TG482118.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6327508CA472118.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6327995CT461923.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6328410AG501936.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6328424CG481826.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6328600CT532294.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6328616TG542379.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6329100CT542188.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6329655AG451726.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6329738TC491940.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6329944CT441571.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6330456CT612356.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6331115GA451734.771.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis
6331304CA371478.771.00NON_SYNONYMOUS_CODING(MISSENSE|Caa/Aaa|Q174K|None|Vigan.09G047700.01)Vigna nepalensis
6331552TA461839.771.00UTR_3_PRIME(|147||None|Vigan.09G047700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6325773CCCTT411798.731.00CODON_INSERTION(|cct/cCTTct|P18PS|None|Vigan.09G047700.01), DOWNSTREAM(|3604||None|Vigan.09G047600.01)Vigna nepalensis
6327246GGA431558.731.00INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6326195(TA)21(TA)8411887.731.00DOWNSTREAM(|4026||None|Vigan.09G047600.01), INTRON(|||None|Vigan.09G047700.01)Vigna nepalensis