GBrowse Details

Vigan.09G032900.01

Basic Information:
Name: Vigan.09G032900.01
Multiple alignment
Variant Information
Position: Chr09:3786369..3788677 (- strand)
Length: 2309
Functional Information:
Description: Similar to dCTP pyrophosphatase 1-like. [XP_002266481.2, Vitis vinifera]
InterPro: NTP pyrophosphohydrolase MazG, putative catalytic core (IPR004518)
EAR (IPR009039)
NTP Pyrophosphohydrolase MazG-related, RS21-C6 (IPR011394)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,2.55,14.71,1.54,0.56,62.97,2.34,0.89
Arabidopsis thaliana homolog: AT3G25400.1
Automatic updates:
Name: NM_001251774 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306684 (LOC100306684), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:3786369..3786565 (- strand)
Length: 197
Type: three_prime_UTR
Position: Chr09:3786566..3786841 (- strand)
Length: 276
Type: CDS
Position: Chr09:3788495..3788617 (- strand)
Length: 123
Type: CDS
Position: Chr09:3788618..3788677 (- strand)
Length: 60
Type: five_prime_UTR

>Vigan.09G032900.01 class=Sequence position=Chr09:3786369..3788677 (- strand)
ATTCTCATCT CTCTCTCTCT CTGTTCTCAT CATCATTTTC ATTCTCTCTG CTCTGAAAAC ATGACTGGGG TTTCTGAAAA
AGCAGCTGTT TCTCTTGATC AGCTTAAGGA GATTATGAGT GAGTTTGCAA AGGAGAGGGA TTGGGAGCAG TTTCATAGCC
CAAGGAACCT CCTTTTGGCT TTGGTATGCT TCTCTTTCTC AACAAAAAAA ATGTGCTTTC ATGCTGCTTG TCATTTCACC
TTGCATGAAC ACTGTTTCTT TCTCTTCTTT TTCAACCAAC CCATGTCAAC TTTTGTGTTA TTTTTCAAGA AGCTCATCCC
AAAATTTTTA CTTTTTTAAT GTTATTTTCT TGAGGATTTC ACTGTGTTTC TATCAAATTT GTGTTGTTTT GTTATTTATC
ATGGGTGTTT GAGTATTGAG GATTTTTGTT TTCCTCATTT ATGCATTTGG GTTGAGAACA CTGAAATTTT CTTGAAGTTG
GTTCCCTTTA ATGTTTTTTT TTCTCCATCA TGGGTGTTTG AACATTGATT TAGCTTAGGT TGTTTGTTAT AGCTTCATTC
ATGCATTTCG GAACTTTGAT TTTTTTTTTC TCTTTAAAGT TGGTTCCTTT TATCTTGTGC TTTTTTTTTA TCATGGGTGT
TTGAATATTT GACCCACCAA AGAATGTTTA TGATCATAAG TTAAGCATTT GGAAAAATTT CTGTTTTTAT TTTAAATTAG
ATCCTCTTAA TCTCATTTGT TCTTTACCAT GGGCGTTTGC ATTTTGAACC ACTGAATTTT TTTTTCTTAA AGTTGGTTTC
TTTTAATCTC TTTTATTCTT CATCTTGGGT GTTTGCATGT TGATCATGTT TGTGATCTTT ATTTATGCAT TTTAATTTGA
AAACATTGTA TTTTGATAAA GTTTGCACCT TTTAATCTCA TTGTCAATTT AATTTTTTTT TTCATTTATG AATAGGGTGC
ATATATTCCA GGTTAAAAAG ATTTATTAAA TTGGTTGTGG CATGGAATTT TTTCTTTTAC TCTGAGACTT TACATAGTAG
AAAGATGGTG ATAGAAGTTT GAATTTTAAA TTCAAAAGAT TTATTATACT ATTAAAATAA TCATTTTTTT TTCTATTTTA
ACTGAATAAA ATAAAATATG TTTTCTTTCC TCTTTTTAAA AGAATTCTTT TATATTTGCC AAGATTAGTA AAATCACACT
TTGCAAGCTG TTATCACATT GATAACTTCT AAGATGAAAC CCACACAATA TATTCCATGC CATTCTTCAC ACATGGTACA
TTAATGTGTC AAAAAGACTA ATGGAATATT AGGCAAAAAA GGAAAAAAAA TGAATAAATA TGCTTTTCTA ATATATAAAT
GAAATTCGGA CTCTCATGTA TATTGAAGCT GTTATTTCAA GTTTGAGACA TTTCAATTTT AATTTTAAAA AATCTGTAAT
TTTAGTTAAT CCCACAATAT TTTTATATAT TTATTTCTTA CATTATAATT TCTTAAACCA TTTTTATGGT GTTTTAGATT
ATAACATAAT TGAACCAAGA AAATGAAATA TATTAACAAA ATTTAGAGAT AGATTGAAAT TGTGGATTTT TTTAAAAAAC
ATATTGAATT TTAAAATTAA ACAAAATTAA AATTATGGAT TCAACATAAT GGTAGGCCAA AACTGTATTA AAGTCTTTAT
TTATTTAGTG TTTTTCTTTC TTTGATCACC TCATTGAAAG GGAACCAAAT AAAAATAAAA ATTTGATTTT TAAGTTGAAA
TTTCAAAGTT TGCCTTGCTC CAAAAAAGGG TAAGTTCAAT TTTATCTTAT TGATTGACTT TGTAATGATT CCCCAGGTGG
GTGAAATGGG AGAATTGTGT GAGATATTTC AATGGAAAGG AGAGGTTCCA AAGGGTCTTC CAGATTGGAA AGAAGAAGAA
AAGGTTCATC TTGGAGAAGA ACTTTCAGAT GTGTTGCTTT ATCTTGTGAG GCTCTCTGAC ATGTGTGGTG TTGATCTTGG
CAAAGCTGCT TTGAGAAAGG TTGAACTGAA TGCCATTAAA TACCCTAAAA AAGTTTCTGA AAAAGAGCCT TCAATCAGCA
CCAAAGAAGA TGAAAATTTA GAAGGTGTTT GATGAAATTG CATTTTGTGT TTTGGGAGGA ACAGTGGGAA AGTGGTTTTG
GTATATGTTC TTCTATAAAG GGTGGAGGCT ATTATTGTTG GATTGTTTTG GTACTAATTT ATTCTCTTAC CTTTGGCATA
TTGAATATTA TTGAACTGTG TTTTTCTTTT GAACATGTTT TAAGAGAATT CAATTTCACC TTTTTATGA

>Vigan.09G032900.01
ATTCTCATCT CTCTCTCTCT CTGTTCTCAT CATCATTTTC ATTCTCTCTG CTCTGAAAAC ATGACTGGGG TTTCTGAAAA
AGCAGCTGTT TCTCTTGATC AGCTTAAGGA GATTATGAGT GAGTTTGCAA AGGAGAGGGA TTGGGAGCAG TTTCATAGCC
CAAGGAACCT CCTTTTGGCT TTGGTGGGTG AAATGGGAGA ATTGTGTGAG ATATTTCAAT GGAAAGGAGA GGTTCCAAAG
GGTCTTCCAG ATTGGAAAGA AGAAGAAAAG GTTCATCTTG GAGAAGAACT TTCAGATGTG TTGCTTTATC TTGTGAGGCT
CTCTGACATG TGTGGTGTTG ATCTTGGCAA AGCTGCTTTG AGAAAGGTTG AACTGAATGC CATTAAATAC CCTAAAAAAG
TTTCTGAAAA AGAGCCTTCA ATCAGCACCA AAGAAGATGA AAATTTAGAA GGTGTTTGAT GAAATTGCAT TTTGTGTTTT
GGGAGGAACA GTGGGAAAGT GGTTTTGGTA TATGTTCTTC TATAAAGGGT GGAGGCTATT ATTGTTGGAT TGTTTTGGTA
CTAATTTATT CTCTTACCTT TGGCATATTG AATATTATTG AACTGTGTTT TTCTTTTGAA CATGTTTTAA GAGAATTCAA
TTTCACCTTT TTATGA

>Vigan.09G032900.01
ATGACTGGGG TTTCTGAAAA AGCAGCTGTT TCTCTTGATC AGCTTAAGGA GATTATGAGT GAGTTTGCAA AGGAGAGGGA
TTGGGAGCAG TTTCATAGCC CAAGGAACCT CCTTTTGGCT TTGGTGGGTG AAATGGGAGA ATTGTGTGAG ATATTTCAAT
GGAAAGGAGA GGTTCCAAAG GGTCTTCCAG ATTGGAAAGA AGAAGAAAAG GTTCATCTTG GAGAAGAACT TTCAGATGTG
TTGCTTTATC TTGTGAGGCT CTCTGACATG TGTGGTGTTG ATCTTGGCAA AGCTGCTTTG AGAAAGGTTG AACTGAATGC
CATTAAATAC CCTAAAAAAG TTTCTGAAAA AGAGCCTTCA ATCAGCACCA AAGAAGATGA AAATTTAGAA GGTGTTTGA

>Vigan.09G032900.01
MTGVSEKAAV SLDQLKEIMS EFAKERDWEQ FHSPRNLLLA LVGEMGELCE IFQWKGEVPK GLPDWKEEEK VHLGEELSDV
LLYLVRLSDM CGVDLGKAAL RKVELNAIKY PKKVSEKEPS ISTKEDENLE GV*