GBrowse Details

Vigan.07G022000.01

Basic Information:
Name: Vigan.07G022000.01
Multiple alignment
Variant Information
Position: Chr07:1518235..1521160 (+ strand)
Length: 2926
Functional Information:
Description: Similar to Uncharacterized protein. [Q2HU50, Medicago truncatula]
InterPro: Uncharacterised protein family Cys-rich (IPR006461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.42,0.28,0.23,0.24,0.21,0.00,5.83,0.12
Arabidopsis thaliana homolog: AT1G52200.1
Automatic updates:
Name: NM_001254589 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max FWL family protein FWL8 (GMFWL8), mRNA.
PubMed ID: 20230508 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:1518235..1518543 (+ strand)
Length: 309
Type: five_prime_UTR
Position: Chr07:1519088..1519160 (+ strand)
Length: 73
Type: five_prime_UTR
Position: Chr07:1519435..1519466 (+ strand)
Length: 32
Type: five_prime_UTR
Position: Chr07:1519467..1519647 (+ strand)
Length: 181
Type: CDS
Position: Chr07:1519738..1519829 (+ strand)
Length: 92
Type: CDS
Position: Chr07:1519830..1521160 (+ strand)
Length: 1331
Type: three_prime_UTR

>Vigan.07G022000.01 class=Sequence position=Chr07:1518235..1521160 (+ strand)
CTGCCCTTTC ATACTCCAAT GCTCTTTTAA AGGCTGTAGA TTCATTCATT TATTTATTTC TAAGTCCAGC AGCATTTGCA
AGAGCAATCT GCTCTGCGTT CGGTTTAATT CAAGGCTTCC TTCATTGTTG GTTTTTGTCA GAACTTTTCA AGAAAGAAAA
AGGCGAGATG CAGGCCAGTG AGGATCAGAA GATTCAACAG AATGAAGCCG TTGGTTCATT TGCTCCAAGG TATGAAGCTG
ATACTTTTCA GCCAATAGGG AGTCCATGGA GCACTGGACT ATTTGACTGT CATGAGAATC AGACAAATGG TAATATCTAC
TTTAGTTTAA TTTCTTCAAC TAAGTTTTTT ACTAGATTAC ACGTTTAAAC TTGTTCTAGA AAGATAACCT TAATGAACTT
AGTAGCACTT TCCATTACCA TGAGATATTA GTATTTTTTT GGTAAGAAAA ATTCAGGTGG AGAGGTTGCT CTTCATTCCA
AAGCTAGAAA ATAGCCTCAA TGAAGGCTTA CAATTCTACC TACATATAAT GTTGTTTGAT GACTTCAATG TATGAGCTAA
TTTTCAGTGG CTAGGCCTAG ATGGTAGAAT TACTTGGGTT ACTTTTCCAT AAGCAATTTC TGTTCAAAAA CAGCTGAGTT
GATGCATAAC TGAGCAAATG CTGCAGTTTA TGCTATGAGT TTGTGCAAGG ACACAAGGGA AACCTAGGAA AAATGAATAA
GCTAATTACC CTTTTATTTG TCCTTACCAA GAAAATTAGA AACAATTAGC TATCCTTTTC ATTTATCTTT ATTTGCTTCA
TGCAAAATGC AGTGTGGTTG ATCTAATTAT GTATACTTTG ATTTTGGTTG CAGCTGTTAT GACATCATTT TTCCCGTGTG
TAACATTATG GGCAGACAGC AGAAATATTA GATGGCGGAG AACTTAGTAA GGACCCTTAC ACTTAGCTCA CCATGCATTC
GTTTCTCATA ATTTTTTCAA CTTTTTGATA TAAATTATGT TTGAACCCAT AATATTGAAA TTCAAGAGTG AGTTGTAGTA
TTCTATTACT CAGAAATAGA CAGATTAAAC AACATAGTAA AAAAATCTCA CAAACATCAT GTTTAATTTC AAGTTAAAGA
TAATATAATG TTTTCTCATG TTTTGATTCG AATCCACCGG TAAAGATTTT CCAACAATTG ACACGTTCAA ATGATTTCAG
GTTGTCATCT GGGGAGCTTC ATTTACCTAT TAATGATGCC TGCTTTGTGC TCTCAATGGA TAATGGGGTC AAAGTACAGA
ACAAAGTTGA GAAAGAGGTA TAATTTGGTT GAAGCACCAT ACACAGACAT AGTCTCTCAC ATATTTTGTC CATGTTGTTC
CCTTTGTCAA GAGTTCAGAG AGCTAAAAAT CAGAGGACTT GACCCTGCTC TTGGTAACTC AGCTCCTTCC TTCTGTTCAT
CCTTATTCAA TTTTACGTTC TTAATTATTA TCTCACATAA CTTATTGCAA TTTGCATATG CAGGATGGAA TGGAATTCTT
GCACAAAAGC ATGCAAAACA GCAAAGTGAT CAAACACTGA ACAATCCTCC TTCAAACCAA TTCATGTCCA AGTGAACACA
TTCACGGTGG AGCTGTTAAA ATTAAACTGA GTTGTATTTC TTTTGATTCG TTCTGTGCTT GTTTACTTTT TCATGTCTGA
TACTTGTGTC TGAATTCTAA GAAAGAAAAT AAAGCCGAAA GGTGGCAAGT TTGGTATGAT AAGTATATCA CTGTATAAAT
TGTTGCATCC ATTCTTACAT GGAGGAGAGT CTTACTGTAT AAAATCTTTG GAAGAATATA AAGTAATATA AGATTTGTAC
CTTTTACTAA TATTCAAGAC GCAACTGCCA AATATCTTAT TCATGAATGC AACTTGTACA AAACATGGTT TTTTCTATAT
AGTACTACAG TACACAGAAG CTGATCATTA AAAAAAAGGT TAGAATATCC AAATTATGTA TAAAAACATT TAAGTGAACA
ATTATTGGGT TTCATTACAT TGCCTCTTGT TGTTGATCAT GAACCATGTT CCCTCTTTCT TCCTTCTTTG AGACTGCTTC
AGCACTAAGG CCATAAGCCC AACTGCAAAC CAAATAGTAA AGAGTATTAA CAGCACTCAG TATGGAAAGA AGCCAATAAT
ACTTGTCATA GTGACCCTTG TTAATGTTAT CTGAAACCCA ACTCTGTTTT CCACCTTTGG AAGTAATGTT ATCCACAGTG
CTGAGTATAA GAGAAGCCAC CAAGTTTCCC ACAGCAGATC CTAGGCTGAA TAGAGATGCA GCAATGCTTG ACATGCTACG
TGGAAACTCA GAGTAATAGA ACTCTGATTG CCCCATTGCA TTAAAGGCTT CTGCTATACC ACACAGAATA TTATGTGGGA
TAAGCCACAT TGCAGACATC TCCAAGACTG CCTCAGGATT ATCAACAAAC CCCTCTCCTA TTGCTTTCCT CCTCCTTATA
CTCTCAACAA TTGCCGAAGT CACAAAGTCC AAAAAGGAGA AAAACAGTCC AATTCCTATT CTTCTTTTGG CACCGATGCT
TACTGGTTTT CCTCTCACTT TTGAAGCTAG AGGAAGGATG ACACGATCAT AGACACCCGC AGTCATGCAC ACTGCAAGCA
TCATGAACAC ACCGAAAGAG CCCGCTGGAA TTTGGAAGTT TGAAGTGACC TGTCTGTTCA TGGTTTTAGC TTGGAGCAAC
CAAAGTGATG CTGGCTTGTG CTAACTGCCA CCATGATACC GGTCGACCAA ATGGGAATAA CCTTAATGAT TGCCTTCAGT
TCTTCCACTT GCTCTATTGT GCAAAGACTC CATTTTTTTG AAGCCGACCC ATCAGAGGCT ATATCCCGTT CTCTGTCTCT
GATGATGCAA GCTTTGTTTA GAAACCTACA AACAGTAAGC ATCACC

>Vigan.07G022000.01
CTGCCCTTTC ATACTCCAAT GCTCTTTTAA AGGCTGTAGA TTCATTCATT TATTTATTTC TAAGTCCAGC AGCATTTGCA
AGAGCAATCT GCTCTGCGTT CGGTTTAATT CAAGGCTTCC TTCATTGTTG GTTTTTGTCA GAACTTTTCA AGAAAGAAAA
AGGCGAGATG CAGGCCAGTG AGGATCAGAA GATTCAACAG AATGAAGCCG TTGGTTCATT TGCTCCAAGG TATGAAGCTG
ATACTTTTCA GCCAATAGGG AGTCCATGGA GCACTGGACT ATTTGACTGT CATGAGAATC AGACAAATGC TGTTATGACA
TCATTTTTCC CGTGTGTAAC ATTATGGGCA GACAGCAGAA ATATTAGATG GCGGAGAACT TAGTTGTCAT CTGGGGAGCT
TCATTTACCT ATTAATGATG CCTGCTTTGT GCTCTCAATG GATAATGGGG TCAAAGTACA GAACAAAGTT GAGAAAGAGG
TATAATTTGG TTGAAGCACC ATACACAGAC ATAGTCTCTC ACATATTTTG TCCATGTTGT TCCCTTTGTC AAGAGTTCAG
AGAGCTAAAA ATCAGAGGAC TTGACCCTGC TCTTGGATGG AATGGAATTC TTGCACAAAA GCATGCAAAA CAGCAAAGTG
ATCAAACACT GAACAATCCT CCTTCAAACC AATTCATGTC CAAGTGAACA CATTCACGGT GGAGCTGTTA AAATTAAACT
GAGTTGTATT TCTTTTGATT CGTTCTGTGC TTGTTTACTT TTTCATGTCT GATACTTGTG TCTGAATTCT AAGAAAGAAA
ATAAAGCCGA AAGGTGGCAA GTTTGGTATG ATAAGTATAT CACTGTATAA ATTGTTGCAT CCATTCTTAC ATGGAGGAGA
GTCTTACTGT ATAAAATCTT TGGAAGAATA TAAAGTAATA TAAGATTTGT ACCTTTTACT AATATTCAAG ACGCAACTGC
CAAATATCTT ATTCATGAAT GCAACTTGTA CAAAACATGG TTTTTTCTAT ATAGTACTAC AGTACACAGA AGCTGATCAT
TAAAAAAAAG GTTAGAATAT CCAAATTATG TATAAAAACA TTTAAGTGAA CAATTATTGG GTTTCATTAC ATTGCCTCTT
GTTGTTGATC ATGAACCATG TTCCCTCTTT CTTCCTTCTT TGAGACTGCT TCAGCACTAA GGCCATAAGC CCAACTGCAA
ACCAAATAGT AAAGAGTATT AACAGCACTC AGTATGGAAA GAAGCCAATA ATACTTGTCA TAGTGACCCT TGTTAATGTT
ATCTGAAACC CAACTCTGTT TTCCACCTTT GGAAGTAATG TTATCCACAG TGCTGAGTAT AAGAGAAGCC ACCAAGTTTC
CCACAGCAGA TCCTAGGCTG AATAGAGATG CAGCAATGCT TGACATGCTA CGTGGAAACT CAGAGTAATA GAACTCTGAT
TGCCCCATTG CATTAAAGGC TTCTGCTATA CCACACAGAA TATTATGTGG GATAAGCCAC ATTGCAGACA TCTCCAAGAC
TGCCTCAGGA TTATCAACAA ACCCCTCTCC TATTGCTTTC CTCCTCCTTA TACTCTCAAC AATTGCCGAA GTCACAAAGT
CCAAAAAGGA GAAAAACAGT CCAATTCCTA TTCTTCTTTT GGCACCGATG CTTACTGGTT TTCCTCTCAC TTTTGAAGCT
AGAGGAAGGA TGACACGATC ATAGACACCC GCAGTCATGC ACACTGCAAG CATCATGAAC ACACCGAAAG AGCCCGCTGG
AATTTGGAAG TTTGAAGTGA CCTGTCTGTT CATGGTTTTA GCTTGGAGCA ACCAAAGTGA TGCTGGCTTG TGCTAACTGC
CACCATGATA CCGGTCGACC AAATGGGAAT AACCTTAATG ATTGCCTTCA GTTCTTCCAC TTGCTCTATT GTGCAAAGAC
TCCATTTTTT TGAAGCCGAC CCATCAGAGG CTATATCCCG TTCTCTGTCT CTGATGATGC AAGCTTTGTT TAGAAACCTA
CAAACAGTAA GCATCACC

>Vigan.07G022000.01
ATGATGCCTG CTTTGTGCTC TCAATGGATA ATGGGGTCAA AGTACAGAAC AAAGTTGAGA AAGAGGTATA ATTTGGTTGA
AGCACCATAC ACAGACATAG TCTCTCACAT ATTTTGTCCA TGTTGTTCCC TTTGTCAAGA GTTCAGAGAG CTAAAAATCA
GAGGACTTGA CCCTGCTCTT GGATGGAATG GAATTCTTGC ACAAAAGCAT GCAAAACAGC AAAGTGATCA AACACTGAAC
AATCCTCCTT CAAACCAATT CATGTCCAAG TGA

>Vigan.07G022000.01
MMPALCSQWI MGSKYRTKLR KRYNLVEAPY TDIVSHIFCP CCSLCQEFRE LKIRGLDPAL GWNGILAQKH AKQQSDQTLN
NPPSNQFMSK *