GBrowse Details

Vigan.06G247900.01

Basic Information:
Name: Vigan.06G247900.01
Multiple alignment
Variant Information
Position: Chr06:37220867..37224576 (- strand)
Length: 3710
Functional Information:
Description: Similar to Uncharacterized protein. [I1LIK7, Glycine max]
GO: Biological Process: biotin biosynthetic process (GO:0009102)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: biotin synthase activity (GO:0004076)
Molecular Function: iron-sulfur cluster binding (GO:0051536)
InterPro: Biotin synthase/Biotin biosynthesis bifunctional protein BioAB (IPR002684)
Elongator protein 3/MiaB/NifB (IPR006638)
Radical SAM (IPR007197)
Biotin and thiamin synthesis-associated domain (IPR010722)
Aldolase-type TIM barrel (IPR013785)
Biotin synthase (IPR024177)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.16,3.24,25.82,25.90,19.95,29.09,10.88,23.76
Arabidopsis thaliana homolog: AT2G43360.1
Automatic updates:
Name: NM_001250298 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max biotin synthase (LOC732577), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:37220867..37221253 (- strand)
Length: 387
Type: three_prime_UTR
Position: Chr06:37221254..37221553 (- strand)
Length: 300
Type: CDS
Position: Chr06:37221934..37222073 (- strand)
Length: 140
Type: CDS
Position: Chr06:37222856..37223061 (- strand)
Length: 206
Type: CDS
Position: Chr06:37223252..37223358 (- strand)
Length: 107
Type: CDS
Position: Chr06:37223567..37223746 (- strand)
Length: 180
Type: CDS
Position: Chr06:37224134..37224325 (- strand)
Length: 192
Type: CDS
Position: Chr06:37224326..37224576 (- strand)
Length: 251
Type: five_prime_UTR

>Vigan.06G247900.01 class=Sequence position=Chr06:37220867..37224576 (- strand)
TCCCTCTGTA GTTGGAAGAG AGAGGGAATG AGTCATCACT CAAGGCCGCC AAACAAACAC TCACACTATA AACTCCGGAG
TCCCAATTTT TAAGGAAACC AAAACCAAAG CAAAACTTCT TCTCTGTTCT TTCCGACCTC TTAATATTCG CAGATCTCTA
TAATATTTTT CGATCTACAT TCTCTCTTCT GTTGTCGTTG GAGCTAAAAC TGAGATTTGT ATTGCCCATC TTTGAATTCC
AAAGCAAAAA CATGTTTTTG GTGAGACCCA TTTTCCGAGG ACCCTCCCTC TGGGCGTTGC ACTCTTCCCA TGCTTGTTTC
TCTGCCTCAG CGGCTGCAGT TCAAGCTGAG AGAACCATCA AAGATGGGCC AAGAAACGAT TGGAGCCGAG ACGAAGTCAA
ATCCATCTAC GACTCTCCCA TTTTCGATCT TCTCTTTCAC GGGGTAATTC CTTCTAATTT GTTTTAATGG GTTTCGGCAA
AAAATCTTTT TTTTTTTTGT TTTTGTTTTT GTTTTCAGTT GTTACGTTGA TAGGGGAAGT CCATTATTTA TGGTGAAAAT
TTCCATCATT TATGTTGAAA ATATGTGTCA ATGATTTCGC ATTCACTACT GATATTATGA AATAATGAAT ATAATTGAGG
GCGACCATTG TTCTGTGGGC TAATTTTTGG GGTGAGATAA GCACTAGTCT AAAGTTTAAG ATAGTGTTGG ACCTATTGTT
TTACCTTTTA TTGGATTGTA ATTTGAACAT TCTCAGCTGT CTCGTCTTAC AAACTTGTTG TACATTTATC AATACGTTGT
TTCTATTTTT GGGGTGATTT GGTTTGTCAG GCTCAAGTTC ACAGACATGC GCATAACTTC AGGGAAGTTC AGCAATGTAC
TCTTCTGTCT ATCAAAACAG GAGGGTGCAG TGAAGATTGT TCTTATTGTC CTCAATCATC TAAGTATAAT ACCGGAATCA
AGGGCCAACG CCTTATGAAC AAGGAAGCTG TTCTAGAGTC TGCAAAGCGG GTATACTTTT TCTCATATGT CATTATTGAT
CTCTAGTATT TGGTCTTGTG ATGACATTAA TGATATCTGT AAAACTTGAA TCTTCCTCTC AAATGACATC ATAGAATGGG
TAAGTGTTAT GTATTCATTT CAAACATTTC TTTACTTCGT ATGTCTTGTT CTTGTGGTGC CGTTCTTTTT TCTTGAACGG
ATAATCCTTT TCTTGCAGGC AAAAGAGGCT GGGAGCACTC GCTTTTGTAT GGGTGCTGCG TGGAGAGATA CACTGGGAAG
AAAGACCAAC TTCAACCAGA TCCTTGAATA TGTGAAAGAC ATTAGGTAAT GCAACATCAT TTTAGTTGTC AGTTTTTCTA
CAGAATGATT GGCACATAAG TCTTAAGTGG ATTTGTCTGT TAAATACATA AATAAAATGA AAAGTATGCT GAATGTTTTA
CTTATTAGTC CAAATGAAAT ATAGTTTATT ACTTCCGTGA AAATTATAAC ACTTAGGCTA TCTGTCTTAT TCCAGGGAAA
TGGGGATGGA GGTTTGTTGT ACCCTTGGCA TGCTGGAGAA ACAGCAGGCT CTTGAACTCA AGAAGGCAGG TCTCACTGCC
TATAATCACA ATCTTGACAC CTCAAGAGAA TATTATCCAA ACATCATCAC AACAAGGAGT TATGATGAGC GCCTAAAAAC
ACTTGAGTTT GTTCGTGATG CAGGGATCAA TGTCTGTTCT GGTAATTATA TTAACTTAAA AGTGTTATGA AACTTATTAG
TAATTTGTTA TAACTTATAG TTAAGTTCAT CAACATGAAT ATAATATATT GACTGGTTGA AGCTTGACCA TTTTATTTAT
AAGCATTTGT TCTTTCTTTG TTCCAGAATC ATAACATCTC ATTCTTTATG AAGTCTTTTT TTCACTGCTT TTCAAATTGA
TTGCTTTTTT GGGAATAAAA ACAATTCAAA ATGTTAGCTT TGTCTTTGTA AATTTGAAAA ATGTATAGCC AATTATATGT
ATTTTATTTA TAGATTAATT GAGTAAGGTG CGAATCAGAA CTATCTAAGT GGCTTGAGGA TTTGTTTGTG ATAGTATTTC
AAGTTTGGAG TGAATCTTAA TACCTTCTTT TGTTTACTTT TAGTGACATT ATAGTTACTT GAGAAAAGAG ATCCACAGCA
GTATAATGAT GTGTAATGGA CTTCAATGCT ATAACTATCT TTTATACAGA TTTTATGTCA CAATTTCTAT CTTTTTCCCT
TAAAGCGAGT ATCTTAGGGG GACCAATATT TATTTAACGA CTCAGCCATG ATATCATTAG GTATCAAATC TGATTGTTTT
GCTTTGTATC TACTCAAAAC CAACCTGAAT TTACATTTTA TCTTTTCTCA TCAATTAGAC AATGATTGTG CCATCCATTA
TTAGTGATGA ATATATGGTA CACTATATGC AGTAAAATAT CTCATTGCAA TGAGGAGGGT TATCTTTCTT ATAATGGATT
GACTTGCTGA AAATTATTTA CAGGAGGAAT TATAGGACTT GGAGAAGCAG AGGAGGACCG TGTAGGTTTG TTACATACAT
TGTCAACACT TCCCACCCAT CCTGAGAGTG TTCCTATTAA TGCACTTGTT GCTGTGAAGG GAACCCCACT TGAGAATCAA
AAGGTGAATT CATGAAATAG TTGAATTATT AAACTAAACT AATAGCAAAT AAATGTCAAT CACCTTATTG TTCTTAATTT
CAGATTGAGT TTATAAGTGA GGAGGACAAA AAGCTTGTTT TTAAAATTTT TAGGTTATAT AAAATAAAAA ATGTTTCCTT
GTGTAGGATG TAATTGCAAT GAATAATATC AACTAACAAG CAGAGATCAA AGTTGTATTA TTGTATATAG GTATTAGGGT
TGCTTTTAGA TCAAGTTAGG AGTGATGCAT GATCAGGATT TGCTTGAAAC CTAGTGAATC TTGTGTCACA TATACCAGTT
TTTACACAAA CTGCTGTCAC ATTGATTTGA ATTGTCTATA TGACCTATCT GCAATATTTT CAGCCTGTTG AAATATGGGA
GATGATTCGC ATGATAGCCA CAGCACGTAT AATAATGCCA AAATCAATGG TCAGGCTATC TGCTGGCAGA GTCCGGTTCT
CCATGCCTGA ACAGGCATTG TGTTTTCTTG CTGGTGCAAA TTCCATATTC ACTGGTGAAA AGCTTCTCAC TACACCTAAC
AATGACTTTG ATGCTGATCA ACTCATGTTC AAAGTTCTTG GACTTCTACC AAAAGCTCCA AGCTTTAATG AAGGTGAAAC
TAGTGAGACA GAAGATTATA AGGAAGCAGC TTCTTCTAGT TGAGCTGGTC AATCTACGAT CCTTCAGCCT CTGTTACTGC
TAATTAGCAT GTACTTGATG TTAGGTTTCA TTGAGCTCGT CGTCTATACT CATATTTGAC GACATGAACT CCCAAGAACT
AAACATAAAT GTTGAAAACA TTTATTTTTG CCATAACTAG GCTTTGTCAA GCATAAAATT CATGAGTGGA GTAAAAGTTG
ACATAGTTTT CTGCATCCTC AGTCTAAAAA AGTGACTCTT TTCTAGTGAT TATTGCCTTT TTTTGGTTGG TAGGTTGTTG
GAGATTTTTC AAAAAGATCC TCTAAAATGG GTTATCATCG TGTTCTCTCT GAGATCAACA TTTGTAGTTT AAATTTGAAT
AAAACTTTAG GGATGTTTAC CAGCGTTTTA 

>Vigan.06G247900.01
TCCCTCTGTA GTTGGAAGAG AGAGGGAATG AGTCATCACT CAAGGCCGCC AAACAAACAC TCACACTATA AACTCCGGAG
TCCCAATTTT TAAGGAAACC AAAACCAAAG CAAAACTTCT TCTCTGTTCT TTCCGACCTC TTAATATTCG CAGATCTCTA
TAATATTTTT CGATCTACAT TCTCTCTTCT GTTGTCGTTG GAGCTAAAAC TGAGATTTGT ATTGCCCATC TTTGAATTCC
AAAGCAAAAA CATGTTTTTG GTGAGACCCA TTTTCCGAGG ACCCTCCCTC TGGGCGTTGC ACTCTTCCCA TGCTTGTTTC
TCTGCCTCAG CGGCTGCAGT TCAAGCTGAG AGAACCATCA AAGATGGGCC AAGAAACGAT TGGAGCCGAG ACGAAGTCAA
ATCCATCTAC GACTCTCCCA TTTTCGATCT TCTCTTTCAC GGGGCTCAAG TTCACAGACA TGCGCATAAC TTCAGGGAAG
TTCAGCAATG TACTCTTCTG TCTATCAAAA CAGGAGGGTG CAGTGAAGAT TGTTCTTATT GTCCTCAATC ATCTAAGTAT
AATACCGGAA TCAAGGGCCA ACGCCTTATG AACAAGGAAG CTGTTCTAGA GTCTGCAAAG CGGGCAAAAG AGGCTGGGAG
CACTCGCTTT TGTATGGGTG CTGCGTGGAG AGATACACTG GGAAGAAAGA CCAACTTCAA CCAGATCCTT GAATATGTGA
AAGACATTAG GGAAATGGGG ATGGAGGTTT GTTGTACCCT TGGCATGCTG GAGAAACAGC AGGCTCTTGA ACTCAAGAAG
GCAGGTCTCA CTGCCTATAA TCACAATCTT GACACCTCAA GAGAATATTA TCCAAACATC ATCACAACAA GGAGTTATGA
TGAGCGCCTA AAAACACTTG AGTTTGTTCG TGATGCAGGG ATCAATGTCT GTTCTGGAGG AATTATAGGA CTTGGAGAAG
CAGAGGAGGA CCGTGTAGGT TTGTTACATA CATTGTCAAC ACTTCCCACC CATCCTGAGA GTGTTCCTAT TAATGCACTT
GTTGCTGTGA AGGGAACCCC ACTTGAGAAT CAAAAGCCTG TTGAAATATG GGAGATGATT CGCATGATAG CCACAGCACG
TATAATAATG CCAAAATCAA TGGTCAGGCT ATCTGCTGGC AGAGTCCGGT TCTCCATGCC TGAACAGGCA TTGTGTTTTC
TTGCTGGTGC AAATTCCATA TTCACTGGTG AAAAGCTTCT CACTACACCT AACAATGACT TTGATGCTGA TCAACTCATG
TTCAAAGTTC TTGGACTTCT ACCAAAAGCT CCAAGCTTTA ATGAAGGTGA AACTAGTGAG ACAGAAGATT ATAAGGAAGC
AGCTTCTTCT AGTTGAGCTG GTCAATCTAC GATCCTTCAG CCTCTGTTAC TGCTAATTAG CATGTACTTG ATGTTAGGTT
TCATTGAGCT CGTCGTCTAT ACTCATATTT GACGACATGA ACTCCCAAGA ACTAAACATA AATGTTGAAA ACATTTATTT
TTGCCATAAC TAGGCTTTGT CAAGCATAAA ATTCATGAGT GGAGTAAAAG TTGACATAGT TTTCTGCATC CTCAGTCTAA
AAAAGTGACT CTTTTCTAGT GATTATTGCC TTTTTTTGGT TGGTAGGTTG TTGGAGATTT TTCAAAAAGA TCCTCTAAAA
TGGGTTATCA TCGTGTTCTC TCTGAGATCA ACATTTGTAG TTTAAATTTG AATAAAACTT TAGGGATGTT TACCAGCGTT
TTA

>Vigan.06G247900.01
ATGTTTTTGG TGAGACCCAT TTTCCGAGGA CCCTCCCTCT GGGCGTTGCA CTCTTCCCAT GCTTGTTTCT CTGCCTCAGC
GGCTGCAGTT CAAGCTGAGA GAACCATCAA AGATGGGCCA AGAAACGATT GGAGCCGAGA CGAAGTCAAA TCCATCTACG
ACTCTCCCAT TTTCGATCTT CTCTTTCACG GGGCTCAAGT TCACAGACAT GCGCATAACT TCAGGGAAGT TCAGCAATGT
ACTCTTCTGT CTATCAAAAC AGGAGGGTGC AGTGAAGATT GTTCTTATTG TCCTCAATCA TCTAAGTATA ATACCGGAAT
CAAGGGCCAA CGCCTTATGA ACAAGGAAGC TGTTCTAGAG TCTGCAAAGC GGGCAAAAGA GGCTGGGAGC ACTCGCTTTT
GTATGGGTGC TGCGTGGAGA GATACACTGG GAAGAAAGAC CAACTTCAAC CAGATCCTTG AATATGTGAA AGACATTAGG
GAAATGGGGA TGGAGGTTTG TTGTACCCTT GGCATGCTGG AGAAACAGCA GGCTCTTGAA CTCAAGAAGG CAGGTCTCAC
TGCCTATAAT CACAATCTTG ACACCTCAAG AGAATATTAT CCAAACATCA TCACAACAAG GAGTTATGAT GAGCGCCTAA
AAACACTTGA GTTTGTTCGT GATGCAGGGA TCAATGTCTG TTCTGGAGGA ATTATAGGAC TTGGAGAAGC AGAGGAGGAC
CGTGTAGGTT TGTTACATAC ATTGTCAACA CTTCCCACCC ATCCTGAGAG TGTTCCTATT AATGCACTTG TTGCTGTGAA
GGGAACCCCA CTTGAGAATC AAAAGCCTGT TGAAATATGG GAGATGATTC GCATGATAGC CACAGCACGT ATAATAATGC
CAAAATCAAT GGTCAGGCTA TCTGCTGGCA GAGTCCGGTT CTCCATGCCT GAACAGGCAT TGTGTTTTCT TGCTGGTGCA
AATTCCATAT TCACTGGTGA AAAGCTTCTC ACTACACCTA ACAATGACTT TGATGCTGAT CAACTCATGT TCAAAGTTCT
TGGACTTCTA CCAAAAGCTC CAAGCTTTAA TGAAGGTGAA ACTAGTGAGA CAGAAGATTA TAAGGAAGCA GCTTCTTCTA
GTTGA

>Vigan.06G247900.01
MFLVRPIFRG PSLWALHSSH ACFSASAAAV QAERTIKDGP RNDWSRDEVK SIYDSPIFDL LFHGAQVHRH AHNFREVQQC
TLLSIKTGGC SEDCSYCPQS SKYNTGIKGQ RLMNKEAVLE SAKRAKEAGS TRFCMGAAWR DTLGRKTNFN QILEYVKDIR
EMGMEVCCTL GMLEKQQALE LKKAGLTAYN HNLDTSREYY PNIITTRSYD ERLKTLEFVR DAGINVCSGG IIGLGEAEED
RVGLLHTLST LPTHPESVPI NALVAVKGTP LENQKPVEIW EMIRMIATAR IIMPKSMVRL SAGRVRFSMP EQALCFLAGA
NSIFTGEKLL TTPNNDFDAD QLMFKVLGLL PKAPSFNEGE TSETEDYKEA ASSS*