Variant information

Chr06:37220867 - 37224576

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
37220867TG632753.771.00DOWNSTREAM(|919||None|Vigan.06G247800.01), UPSTREAM(|4379||None|Vigan.06G248000.01), UTR_3_PRIME(|387||None|Vigan.06G247900.01)Vigna nepalensis
37221076GT672740.771.00DOWNSTREAM(|1128||None|Vigan.06G247800.01), UPSTREAM(|4170||None|Vigan.06G248000.01), UTR_3_PRIME(|178||None|Vigan.06G247900.01)Vigna nepalensis
37221591AG512061.771.00DOWNSTREAM(|1643||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3655||None|Vigan.06G248000.01)Vigna nepalensis
37221759TG502073.771.00DOWNSTREAM(|1811||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3487||None|Vigan.06G248000.01)Vigna nepalensis
37221803CG471924.771.00DOWNSTREAM(|1855||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3443||None|Vigan.06G248000.01)Vigna nepalensis
37221816AT461944.771.00DOWNSTREAM(|1868||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3430||None|Vigan.06G248000.01)Vigna nepalensis
37221891GT582288.771.00DOWNSTREAM(|1943||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3355||None|Vigan.06G248000.01)Vigna nepalensis
37222099TA622499.771.00DOWNSTREAM(|2151||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3147||None|Vigan.06G248000.01)Vigna nepalensis
37222244GA632429.771.00DOWNSTREAM(|2296||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|3002||None|Vigan.06G248000.01)Vigna nepalensis
37222455TG542256.771.00DOWNSTREAM(|2507||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2791||None|Vigan.06G248000.01)Vigna nepalensis
37222719AG522033.771.00DOWNSTREAM(|2771||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2527||None|Vigan.06G248000.01)Vigna nepalensis
37223092AC522122.771.00DOWNSTREAM(|3144||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2154||None|Vigan.06G248000.01)Vigna nepalensis
37223106TA542150.771.00DOWNSTREAM(|3158||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2140||None|Vigan.06G248000.01)Vigna nepalensis
37223180GA602884.771.00DOWNSTREAM(|3232||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2066||None|Vigan.06G248000.01)Vigna nepalensis
37223189AT662857.771.00DOWNSTREAM(|3241||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2057||None|Vigan.06G248000.01)Vigna nepalensis
37223232CA532024.771.00DOWNSTREAM(|3284||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2014||None|Vigan.06G248000.01)Vigna nepalensis
37223364AG471896.771.00DOWNSTREAM(|3416||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), SPLICE_SITE_REGION(|||None|Vigan.06G247900.01), UPSTREAM(|1882||None|Vigan.06G248000.01)Vigna nepalensis
37223403CT502007.771.00DOWNSTREAM(|3455||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1843||None|Vigan.06G248000.01)Vigna nepalensis
37223425AC552235.771.00DOWNSTREAM(|3477||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1821||None|Vigan.06G248000.01)Vigna nepalensis
37223460AT582592.771.00DOWNSTREAM(|3512||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1786||None|Vigan.06G248000.01)Vigna nepalensis
37223464TC562524.771.00DOWNSTREAM(|3516||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1782||None|Vigan.06G248000.01)Vigna nepalensis
37223507TA592303.771.00DOWNSTREAM(|3559||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1739||None|Vigan.06G248000.01)Vigna nepalensis
37223615CT582204.771.00DOWNSTREAM(|3667||None|Vigan.06G247800.01), SYNONYMOUS_CODING(SILENT|aaG/aaA|K108|None|Vigan.06G247900.01), UPSTREAM(|1631||None|Vigan.06G248000.01)Vigna nepalensis
37223841AG602335.771.00DOWNSTREAM(|3893||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1405||None|Vigan.06G248000.01)Vigna nepalensis
37223977GA642511.771.00DOWNSTREAM(|4029||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1269||None|Vigan.06G248000.01)Vigna nepalensis
37224010GA733256.771.00DOWNSTREAM(|4062||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1236||None|Vigan.06G248000.01)Vigna nepalensis
37224018TA703254.771.00DOWNSTREAM(|4070||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1228||None|Vigan.06G248000.01)Vigna nepalensis
37224154AG461967.771.00DOWNSTREAM(|4206||None|Vigan.06G247800.01), NON_SYNONYMOUS_CODING(MISSENSE|Ttc/Ctc|F58L|None|Vigan.06G247900.01), UPSTREAM(|1092||None|Vigan.06G248000.01)Vigna nepalensis
37224302GC481926.771.00DOWNSTREAM(|4354||None|Vigan.06G247800.01), NON_SYNONYMOUS_CODING(MISSENSE|ttC/ttG|F8L|None|Vigan.06G247900.01), UPSTREAM(|944||None|Vigan.06G248000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
37223159AAGTCACCACCAGCC522645.731.00DOWNSTREAM(|3212||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2086||None|Vigan.06G248000.01)Vigna nepalensis
37223175TAT582662.731.00DOWNSTREAM(|3228||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|2070||None|Vigan.06G248000.01)Vigna nepalensis
37223385GGA471424.731.00DOWNSTREAM(|3438||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1860||None|Vigan.06G248000.01)Vigna nepalensis
37224072CAAC662896.731.00DOWNSTREAM(|4125||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1173||None|Vigan.06G248000.01)Vigna nepalensis
37224078CAAAAAC693005.731.00DOWNSTREAM(|4131||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1167||None|Vigan.06G248000.01)Vigna nepalensis
37224129AAT502088.731.00DOWNSTREAM(|4182||None|Vigan.06G247800.01), INTRON(|||None|Vigan.06G247900.01), UPSTREAM(|1116||None|Vigan.06G248000.01)Vigna nepalensis