GBrowse Details

Vigan.06G230000.01

Basic Information:
Name: Vigan.06G230000.01
Multiple alignment
Variant Information
Position: Chr06:35939350..35943547 (+ strand)
Length: 4198
Functional Information:
Description: Similar to Uncharacterized protein. [I1LPW5, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.33,19.20,20.64,14.63,31.83,12.06,16.52,24.08
Arabidopsis thaliana homolog: AT4G38900.1
Automatic updates:
Name: DQ787087 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP transcription factor bZIP21 (bZIP21) mRNA, partial cds.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Name: NM_001358663 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP transcription factor bZIP21 (BZIP21), mRNA.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr06:35939350..35939904 (+ strand)
Length: 555
Type: five_prime_UTR
Position: Chr06:35939905..35941130 (+ strand)
Length: 1226
Type: CDS
Position: Chr06:35941225..35941357 (+ strand)
Length: 133
Type: CDS
Position: Chr06:35941463..35941547 (+ strand)
Length: 85
Type: CDS
Position: Chr06:35942885..35943123 (+ strand)
Length: 239
Type: CDS
Position: Chr06:35943124..35943547 (+ strand)
Length: 424
Type: three_prime_UTR

>Vigan.06G230000.01 class=Sequence position=Chr06:35939350..35943547 (+ strand)
AGACATCGTG GATTGGGTAG CTAAATAAGC TGCGGAGACA AGGGAAGAAA AACCTGGTGT ATGAGAAAAC AAATGAGGTC
GGAATGAAAT TGAAATGCGG GCGAAATGCA AATTGGGGCG AAATGAAATT CTTATTAAAT TAAATTCACG CGTAGGAGTC
ATGAAATCCG TGTAGTAGTC ATCGTCGTGG ATGTAGAGAG AGAAATCATA GAGAGAAACA GAGCTTTTTT TTTTCTTCTC
GTTGTTGCTC TTGTTGGAGA GAGAGAGTGA ATCTTGGAGA GATAAGCGCC TGCTCCTTCG GCATTTCCGT CAGACAAAGT
TAACACTTCC AAGACCGACG CTGCTATTAT TAATCAATTC AATTGAATTC GCCTCTTCAC CATTTCTTAT TCTAGATGAA
CACTGCCAAG GTAATGAATC AGTGAATCTC GATGACGATG ATGATAATTT CGCAACTCGG TCTATCTCGG TTACTTCAAT
TGTGATGATG ATTGTTGTTA TTGTGGTGTG CGGTTGCAGA TTTTGATTGG AAGTGGAATT TGAAGGTGAA GCAGAATGGG
TGAAAACGAA GAAGCGACCA ATGACATGAT GCAGAGGCTT CACTGTTCTT CGTTTCTGAA ACAGCCGTTG AACATGGAGC
AACTCAGCAT CCCGCAGTTC AATCCCTCTC AAATGCGCGC CAGGCATCAG CATCAGTTCG ACGGTGGGAA CAGTAACAAG
CGCGCGGGTA TACCACCTTC GCACCCGCAC CAGATCCCGC CCATTTCGCC CTACTCTCAG ATCCCGGTGA CGCGTCAGCA
GCAAATGGGG TCGCACAACA TTTCCCCTAC ACCCACCCAC ACGCGATCAC TCTCGCAACC TTCCTTTTTC TCCCTCGATT
CCCTCCCTCC CCTCAGCCCT TCCCCCTTCC GAGACTCCTC CTCTACGTCT GTCTCAGAAG CTGCTGACGT CTCCATGGAA
GATCGTGACG TCACTTCTCA TTCTCTCTTG CCACCCTCAC CTTTCACCAG AACACTCAAC ACCTCAACCA ACAGCCATTT
ACCTTTACCC CCTCGCAAAG CACATAGGCG CTCTAACAGT GATATTCCGT TTGGGTTTTC CACCGTTTTG CAATCTTCGC
CCCCGCTTAT TCCTCTCCGG GGCAGAGAAA ACCCCGTTTT GGCGAAACCT GCTCAATTGG TCAAAAGAGA AACACCGTGG
GACAGGGGTG TTGACCACAG TAATGTAGAG GGATCCGGGG AGAAGAAATC CCCGGAAGGG GAAGTTGTGG ATGATCTTTT
CTCTGCTTAC ATGAATTTAG ATAGCTTTGA TGCGTTGAAC TCTTCTGGTA CCGATGACAA AAACGGGACT GAAAATCGTG
ATGATTTGGA TAGTAGAGCG AGTGGGACCA AGACTAATGG TGGTGACAGC AGTGATAATG AAGCTGAGAG TAGTGTTAAT
GAGAGTGGGG ATGGTGCGGC GAGGCAGGGA GGGAGTGAGA AGAGGGAGGG GATGAAGAGG AGTGCGGGTG GGGAGATTGC
ACCCACCACC AGGCACTATA GGAGTGTGTC CATGGATAGC TTCATTTCGA AGTTGAACTT TGGTGATGAG TCGCCGAAGC
TGCCACCGTC GCCGGGGCCG AAAACTGGTT TGATTTCGCC GGGTGGTGGA GTTGATGGCA ATTCATCGGC CTTCAGCTTG
GAGTTTGGAA ATGGGGAGTT TAGTGGGCCT GAATTGAAGA AAATTATGGC CAATGAAAAA CTTGCTGAGA TTGCCTTGAC
CGATCCAAAG CGTGCAAAAA GGTGTTGATG TTGAACCATT AGCTAGTAAA CATACTAACG TAAATGATCC ATGGCACCAG
TTGACTGATT GATTAGGTTT TGGGGTGATT TTCAGGATTT TGGCCAACCG GCAATCGGCT GCACGATCCA AAGAGCGGAA
GATGCGGTAC ATATCAGAGC TAGAGCATAA GGTTCAGACA CTTCAGACGG AAGCCACCAC ACTATCTGCA CAACTTACTC
TTTTACAGGT GGGAGCCTAA CCTGTTTGTG TTGGTAATTT AATGATTAGT ACTGTGACCA CCATGGCTTT ACTTTCTAAT
TTGATTGAAT TCGTCCTAAT TATGTGAACG CAGAGAGATT CTGCTGGACT TACTAACCAG AATAGCGAGT TGAAGTTTCG
CCTTCAATCC ATGGAACAAC AAGCAAAGCT CCGAGATGGT ATTAGTGCCC TTTCATTCGT ATTTTTTCAT TTTTTCTCTC
CATTTTGTTT TATTGATCTG TGCTAGGTAT CAGTAGTTAA TTTTTCACTT ATAGTATTGG TTGATCTAGT CTTCACATTT
TAGATTATAT TTCATCTCAA CGTGCATGGT GAATACTTCT TGCGAAAGAG TGCAAGAGTA GGGGTGAAAG AATTCTGCAG
ATGGCTTGTA AAGTGGAGGA AACAACATGC AATTGTCAAT AAAATGGCCA TTGTTTACTT GTATGATACT TAAGATTGAG
AAGGTATTAA GTATGGACAG TAGTGTATAG AACTCGTTCG CGTAGCTCCT TCAAGTTGTT GCGGTAGATT TTATTCTCAA
TCTAATTTGG GATTTTAGTT TACGTTAGCT ACTCAATTTT ATTTTATTCC AGTAAATTTT ATGCATGAAA ACCAGGCCTT
TACACGATCT CATTCCGTTA TTACTTCTGA TGACTGGTTT TGTTGTTAGT AATATTTTTA TAAAATGTTA TGAACCTTTA
AGAAATAATA ATCTATCACG ACTTTTCACC TAACTGTTTA AACTCTTAGG CGAGTTGGTT CTTGATATGA TACCATAACT
TTCTATCCAG CGGTTAGGAG TCTCATTCAT GTCACTCTCG TTAAAGGGTA TTCCTGGGCA ACATTCATTA GCCTTCGTCA
ACTAACTTTT TTGGGATAAT AATTAGTTTA TTGCAGATCC ATTTATTATT TTTTCTCAAA TTAATGAAAC TTTATAGCTC
GGATACATTG CTAATAATAC TCTACTTATT GTAAATGCAT CATCTAATCA TTTTTCTAAC AAAAGTAGGC CCACTGAATC
CGAAATACTT TATATTCATC GTATTAAGGC CTTTCTATTG AACAACTCGG TTGAAGTGCT TCCAAAGTAA ATGGAATATA
GGAATAGCAT GTAGGAATTA TATAGTAGGA TGCCGAGGAG ACGACCGATT CTTTGCTGAT GTTTAAGTGA CTTACTCAGT
AATTTATGTC CAAATTTCTC GGGGGAGGTT GAGAAATGCT GTGTGAGCCA TAACCAAGTC AATTACGTTC TCTTTACACA
ACATATTTGT TGAAGTTAAC GTGAGTATTA TTGAAGCAAT CCCATTTTAG GATCTGCCTG ATATGCACTC ATCAGGCTGG
ATAAGAATGT GCTGCTGCAT TCCTTTGCAT AGAAACTCAT TATGTAAATT TCTTGCAAGA ATGTCTGTTT TTGAAAGTGA
CACGTCTTCA TTACGTGTGC TTTGGTTTGG AGAGTAGCAG AATCATCCAT TGATTCCTTC TGATTAATTC TTTACCCTGT
ATTTTCTTTT AATAGCCCTA AATGAGGCGC TTACTGCTGA GGTTCAAAGA CTAAAGCTTG CTACAGCTGA ACTGAGTGGG
GATTCACATG GTTCTAGCTG TTTGATTCCT CAGCATTCTG TCAACCCTCT GATGTTTCAG CAGCAGCAGC CTCCCACTGC
ATCCCAACAA AACATTCATC TTCAACATCA ACAGCAACAG CAGCAGCACC ACCAGAATGG TAATGGCAAC TCCAATTCCG
ACATAAAACA ATAGCTTGGA AAGGAGGTCC TCAGCTGGAT GGTTGGTTCG TTATATATTC GCTGCTGTTT AATTGCACTC
ATTTTCGCAT ATTTACAGAA AGTTTTCCTT AATTGCAATG GTATTAAGTT TGATTCGCTT TACCTGTCCA ACTCGGACAG
AAAGTTCATA TACAAGTTCT AATTCCTGTC CTATATCTGA ATTATAGAGC ATATTTAATT TCAGTATATA TATACTATAT
ATTATTAAAT TGTAAGCATT ATTTGGACAT GATTTGTTTT ATGATGACAT TTAGAAACAC TGTTCAGACT TTCTTTTGTA
AAGAATGACC ATTCTGTCAT GGACCTATCA TTTTTTTTAT GGCGTTCGGA GTAGGTTAAT CTAGATTGTT CAATTTATCA
TCTCGAAGTC AAAATTATGA AAGCCTTACC GACATCTT

>Vigan.06G230000.01
AGACATCGTG GATTGGGTAG CTAAATAAGC TGCGGAGACA AGGGAAGAAA AACCTGGTGT ATGAGAAAAC AAATGAGGTC
GGAATGAAAT TGAAATGCGG GCGAAATGCA AATTGGGGCG AAATGAAATT CTTATTAAAT TAAATTCACG CGTAGGAGTC
ATGAAATCCG TGTAGTAGTC ATCGTCGTGG ATGTAGAGAG AGAAATCATA GAGAGAAACA GAGCTTTTTT TTTTCTTCTC
GTTGTTGCTC TTGTTGGAGA GAGAGAGTGA ATCTTGGAGA GATAAGCGCC TGCTCCTTCG GCATTTCCGT CAGACAAAGT
TAACACTTCC AAGACCGACG CTGCTATTAT TAATCAATTC AATTGAATTC GCCTCTTCAC CATTTCTTAT TCTAGATGAA
CACTGCCAAG GTAATGAATC AGTGAATCTC GATGACGATG ATGATAATTT CGCAACTCGG TCTATCTCGG TTACTTCAAT
TGTGATGATG ATTGTTGTTA TTGTGGTGTG CGGTTGCAGA TTTTGATTGG AAGTGGAATT TGAAGGTGAA GCAGAATGGG
TGAAAACGAA GAAGCGACCA ATGACATGAT GCAGAGGCTT CACTGTTCTT CGTTTCTGAA ACAGCCGTTG AACATGGAGC
AACTCAGCAT CCCGCAGTTC AATCCCTCTC AAATGCGCGC CAGGCATCAG CATCAGTTCG ACGGTGGGAA CAGTAACAAG
CGCGCGGGTA TACCACCTTC GCACCCGCAC CAGATCCCGC CCATTTCGCC CTACTCTCAG ATCCCGGTGA CGCGTCAGCA
GCAAATGGGG TCGCACAACA TTTCCCCTAC ACCCACCCAC ACGCGATCAC TCTCGCAACC TTCCTTTTTC TCCCTCGATT
CCCTCCCTCC CCTCAGCCCT TCCCCCTTCC GAGACTCCTC CTCTACGTCT GTCTCAGAAG CTGCTGACGT CTCCATGGAA
GATCGTGACG TCACTTCTCA TTCTCTCTTG CCACCCTCAC CTTTCACCAG AACACTCAAC ACCTCAACCA ACAGCCATTT
ACCTTTACCC CCTCGCAAAG CACATAGGCG CTCTAACAGT GATATTCCGT TTGGGTTTTC CACCGTTTTG CAATCTTCGC
CCCCGCTTAT TCCTCTCCGG GGCAGAGAAA ACCCCGTTTT GGCGAAACCT GCTCAATTGG TCAAAAGAGA AACACCGTGG
GACAGGGGTG TTGACCACAG TAATGTAGAG GGATCCGGGG AGAAGAAATC CCCGGAAGGG GAAGTTGTGG ATGATCTTTT
CTCTGCTTAC ATGAATTTAG ATAGCTTTGA TGCGTTGAAC TCTTCTGGTA CCGATGACAA AAACGGGACT GAAAATCGTG
ATGATTTGGA TAGTAGAGCG AGTGGGACCA AGACTAATGG TGGTGACAGC AGTGATAATG AAGCTGAGAG TAGTGTTAAT
GAGAGTGGGG ATGGTGCGGC GAGGCAGGGA GGGAGTGAGA AGAGGGAGGG GATGAAGAGG AGTGCGGGTG GGGAGATTGC
ACCCACCACC AGGCACTATA GGAGTGTGTC CATGGATAGC TTCATTTCGA AGTTGAACTT TGGTGATGAG TCGCCGAAGC
TGCCACCGTC GCCGGGGCCG AAAACTGGTT TGATTTCGCC GGGTGGTGGA GTTGATGGCA ATTCATCGGC CTTCAGCTTG
GAGTTTGGAA ATGGGGAGTT TAGTGGGCCT GAATTGAAGA AAATTATGGC CAATGAAAAA CTTGCTGAGA TTGCCTTGAC
CGATCCAAAG CGTGCAAAAA GGATTTTGGC CAACCGGCAA TCGGCTGCAC GATCCAAAGA GCGGAAGATG CGGTACATAT
CAGAGCTAGA GCATAAGGTT CAGACACTTC AGACGGAAGC CACCACACTA TCTGCACAAC TTACTCTTTT ACAGAGAGAT
TCTGCTGGAC TTACTAACCA GAATAGCGAG TTGAAGTTTC GCCTTCAATC CATGGAACAA CAAGCAAAGC TCCGAGATGC
CCTAAATGAG GCGCTTACTG CTGAGGTTCA AAGACTAAAG CTTGCTACAG CTGAACTGAG TGGGGATTCA CATGGTTCTA
GCTGTTTGAT TCCTCAGCAT TCTGTCAACC CTCTGATGTT TCAGCAGCAG CAGCCTCCCA CTGCATCCCA ACAAAACATT
CATCTTCAAC ATCAACAGCA ACAGCAGCAG CACCACCAGA ATGGTAATGG CAACTCCAAT TCCGACATAA AACAATAGCT
TGGAAAGGAG GTCCTCAGCT GGATGGTTGG TTCGTTATAT ATTCGCTGCT GTTTAATTGC ACTCATTTTC GCATATTTAC
AGAAAGTTTT CCTTAATTGC AATGGTATTA AGTTTGATTC GCTTTACCTG TCCAACTCGG ACAGAAAGTT CATATACAAG
TTCTAATTCC TGTCCTATAT CTGAATTATA GAGCATATTT AATTTCAGTA TATATATACT ATATATTATT AAATTGTAAG
CATTATTTGG ACATGATTTG TTTTATGATG ACATTTAGAA ACACTGTTCA GACTTTCTTT TGTAAAGAAT GACCATTCTG
TCATGGACCT ATCATTTTTT TTATGGCGTT CGGAGTAGGT TAATCTAGAT TGTTCAATTT ATCATCTCGA AGTCAAAATT
ATGAAAGCCT TACCGACATC TT

>Vigan.06G230000.01
ATGGGTGAAA ACGAAGAAGC GACCAATGAC ATGATGCAGA GGCTTCACTG TTCTTCGTTT CTGAAACAGC CGTTGAACAT
GGAGCAACTC AGCATCCCGC AGTTCAATCC CTCTCAAATG CGCGCCAGGC ATCAGCATCA GTTCGACGGT GGGAACAGTA
ACAAGCGCGC GGGTATACCA CCTTCGCACC CGCACCAGAT CCCGCCCATT TCGCCCTACT CTCAGATCCC GGTGACGCGT
CAGCAGCAAA TGGGGTCGCA CAACATTTCC CCTACACCCA CCCACACGCG ATCACTCTCG CAACCTTCCT TTTTCTCCCT
CGATTCCCTC CCTCCCCTCA GCCCTTCCCC CTTCCGAGAC TCCTCCTCTA CGTCTGTCTC AGAAGCTGCT GACGTCTCCA
TGGAAGATCG TGACGTCACT TCTCATTCTC TCTTGCCACC CTCACCTTTC ACCAGAACAC TCAACACCTC AACCAACAGC
CATTTACCTT TACCCCCTCG CAAAGCACAT AGGCGCTCTA ACAGTGATAT TCCGTTTGGG TTTTCCACCG TTTTGCAATC
TTCGCCCCCG CTTATTCCTC TCCGGGGCAG AGAAAACCCC GTTTTGGCGA AACCTGCTCA ATTGGTCAAA AGAGAAACAC
CGTGGGACAG GGGTGTTGAC CACAGTAATG TAGAGGGATC CGGGGAGAAG AAATCCCCGG AAGGGGAAGT TGTGGATGAT
CTTTTCTCTG CTTACATGAA TTTAGATAGC TTTGATGCGT TGAACTCTTC TGGTACCGAT GACAAAAACG GGACTGAAAA
TCGTGATGAT TTGGATAGTA GAGCGAGTGG GACCAAGACT AATGGTGGTG ACAGCAGTGA TAATGAAGCT GAGAGTAGTG
TTAATGAGAG TGGGGATGGT GCGGCGAGGC AGGGAGGGAG TGAGAAGAGG GAGGGGATGA AGAGGAGTGC GGGTGGGGAG
ATTGCACCCA CCACCAGGCA CTATAGGAGT GTGTCCATGG ATAGCTTCAT TTCGAAGTTG AACTTTGGTG ATGAGTCGCC
GAAGCTGCCA CCGTCGCCGG GGCCGAAAAC TGGTTTGATT TCGCCGGGTG GTGGAGTTGA TGGCAATTCA TCGGCCTTCA
GCTTGGAGTT TGGAAATGGG GAGTTTAGTG GGCCTGAATT GAAGAAAATT ATGGCCAATG AAAAACTTGC TGAGATTGCC
TTGACCGATC CAAAGCGTGC AAAAAGGATT TTGGCCAACC GGCAATCGGC TGCACGATCC AAAGAGCGGA AGATGCGGTA
CATATCAGAG CTAGAGCATA AGGTTCAGAC ACTTCAGACG GAAGCCACCA CACTATCTGC ACAACTTACT CTTTTACAGA
GAGATTCTGC TGGACTTACT AACCAGAATA GCGAGTTGAA GTTTCGCCTT CAATCCATGG AACAACAAGC AAAGCTCCGA
GATGCCCTAA ATGAGGCGCT TACTGCTGAG GTTCAAAGAC TAAAGCTTGC TACAGCTGAA CTGAGTGGGG ATTCACATGG
TTCTAGCTGT TTGATTCCTC AGCATTCTGT CAACCCTCTG ATGTTTCAGC AGCAGCAGCC TCCCACTGCA TCCCAACAAA
ACATTCATCT TCAACATCAA CAGCAACAGC AGCAGCACCA CCAGAATGGT AATGGCAACT CCAATTCCGA CATAAAACAA
TAG

>Vigan.06G230000.01
MGENEEATND MMQRLHCSSF LKQPLNMEQL SIPQFNPSQM RARHQHQFDG GNSNKRAGIP PSHPHQIPPI SPYSQIPVTR
QQQMGSHNIS PTPTHTRSLS QPSFFSLDSL PPLSPSPFRD SSSTSVSEAA DVSMEDRDVT SHSLLPPSPF TRTLNTSTNS
HLPLPPRKAH RRSNSDIPFG FSTVLQSSPP LIPLRGRENP VLAKPAQLVK RETPWDRGVD HSNVEGSGEK KSPEGEVVDD
LFSAYMNLDS FDALNSSGTD DKNGTENRDD LDSRASGTKT NGGDSSDNEA ESSVNESGDG AARQGGSEKR EGMKRSAGGE
IAPTTRHYRS VSMDSFISKL NFGDESPKLP PSPGPKTGLI SPGGGVDGNS SAFSLEFGNG EFSGPELKKI MANEKLAEIA
LTDPKRAKRI LANRQSAARS KERKMRYISE LEHKVQTLQT EATTLSAQLT LLQRDSAGLT NQNSELKFRL QSMEQQAKLR
DALNEALTAE VQRLKLATAE LSGDSHGSSC LIPQHSVNPL MFQQQQPPTA SQQNIHLQHQ QQQQQHHQNG NGNSNSDIKQ
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