GBrowse Details

Vigan.06G221400.01

Basic Information:
Name: Vigan.06G221400.01
Multiple alignment
Variant Information
Position: Chr06:35291255..35295610 (- strand)
Length: 4356
Functional Information:
Description: Similar to G protein beta subunit. [U5U079, Phaseolus vulgaris]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: G-protein, beta subunit (IPR001632)
WD40 repeat (IPR001680)
WD40/YVTN repeat-like-containing domain (IPR015943)
Guanine nucleotide-binding protein, beta subunit (IPR016346)
WD40-repeat-containing domain (IPR017986)
WD40 repeat, conserved site (IPR019775)
G-protein beta WD-40 repeat (IPR020472)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:91.66,43.37,39.91,45.97,41.17,76.94,65.60,40.56
Arabidopsis thaliana homolog: AT4G34460.1
Automatic updates:
Name: NM_001253962 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max guanine nucleotide-binding protein subunit beta-2-like (LOC100811645), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:35291255..35291839 (- strand)
Length: 585
Type: three_prime_UTR
Position: Chr06:35291840..35291875 (- strand)
Length: 36
Type: CDS
Position: Chr06:35292369..35292482 (- strand)
Length: 114
Type: CDS
Position: Chr06:35292595..35292952 (- strand)
Length: 358
Type: CDS
Position: Chr06:35293929..35294353 (- strand)
Length: 425
Type: CDS
Position: Chr06:35295040..35295134 (- strand)
Length: 95
Type: CDS
Position: Chr06:35295280..35295385 (- strand)
Length: 106
Type: CDS
Position: Chr06:35295386..35295610 (- strand)
Length: 225
Type: five_prime_UTR

>Vigan.06G221400.01 class=Sequence position=Chr06:35291255..35295610 (- strand)
AACAATATTC TGTCATTTCC ATTGTCTTCT TCTGTCTCTA TTTTGAAGGC TACCAAACAC TCCCTTAACT CCAACATCCT
CAACCCAACT TCATCTTACA AATAATTAAC CTTTCCCATT AATTTGTTGT AAAACTAAAA TAAAAAGCAT GTTCAGAAAC
ATGGTCTTCC CAACAACAAC CTCTTCCCTT CTTCCTTAAT TGGTGTGCTT ATTTAGGGAG TCCAAATGTC TGTTGCGGAG
CTCAAAGAGC GCCACTCCTC TGCCGTCGAC ACAGTCAACA ATCTCAGGCA CCAATTGAAG CAGAAGCGTC TTTCTTTGCT
CGACACAGAT AGTATAACCC TTTTCTCTCC TTTTTTTCAT TTTTTTTGTT GGGGTTATTG ATAATTTTTT GTGGAGGTTC
AACTTGTACA ACTTGGTGCT AATAATTGGT CTTAGATCTT GCTGATTGAA CACTTTGTTT GATGGGTATT TTTCAGTCTG
TGAGTATGCG AGGTCTCAGG GTAGAACACC TGTGACCTTT GGACCTACGG ATCTGGTTTG CTGTAGAACC TTGCAGGGTC
ACACGGGAAA GGTGCCTTTT TTATGCTTTT CTCTTTTACA TGTTATGCAT GAGTTCGCTT GTTCCTCAAT TTTGGTTGTT
AAATTTGGGT GACTTAGTTT CAAGAACATC ATGGTTGTTC CTCAATTTTG GTTGTTAAAT TTGGGTGACT TAGTTTCAAG
AACATCATGG TTGCTGCTTA TCGCTAGACA ATTCTTTACT TGTTTGACTG ATTATGGAAT CAATTACCTC TCAATACTTG
AATAAACTTC TCTCTAAGCA TTGTAGAAGA GGATATTACT TATATGAAAT GTTAAAATGA GAGGTTTTTA CCATTAGATC
ATCCCCAAGT TAATTTTAAG TTCTGAGAGA AGTTTATTTC GATTTCTTCT TATTTTATTT TCTTCAGTAA ACATTTGTGG
AGAGGTTTAT CCAACCATAG ATGAGGACTA TAACTTATTA GACTAATCCT TTGCATTTTG TTTCTAGTTC TGAATGATAT
CTAGAATGTG ATGGATATTG GTCAGTATGA AATCAAATGC TATCTAGCTT TGTTTTTACC TGTTCCTCGT CAGCTGTGAC
CGGAGAGATA GCCTTTTCCT GTATACACAG AGGAATCATC ATGCTTTTGA TATAATGCTT AGTGATTATT GTAGATTTAT
TCTTATTATC AAACTTGCAG ATTTTAGGTT GACTTGAAAT TTGTTTCAAA TTTGCAGGTG TATTCGTTGG ATTGGACTTC
TGAAAAAAGT CAGATTGTTA GTGCATCTCA AGATGGACGA TTAATAGTGT GGAATGCCCT AACTAGGCAG AAAATCCATG
CCATAAAGCT GCCTTGTGCG TGGGTCATGA CATGTGCTTT TTCACCAACT GGTCAGTCTG TTGCATGTGG TGGTCTTGAC
AGTGTGTGTT CTATTTTCCA TCTTAATTCA CCCACTGACA AAGATGGGAA TCTACCTGTT TCCCGGATGC TTAGTGGACA
TAAGGGTTAT GTTTCCTCTT GTCAGTATGT TCCAGATGAA GATACTCATT TAATTACTGG TTCTGGTGAT CAGACATGTG
TTTTATGGGA TATAACTACT GGCCTTAAAA CATCTGTCTT TGGAGGGGAG TTCCAGTCTG GACACACTGC AGATGTATAC
AGGTGATTGA TTAGTTGTTT ACTGTATTAG TGTGAACCAA ATTTTGTTGT TTCAGTAATT AATTATCTCT TCCTTTGTAT
TTTTAATATG CCTACCATCC ATCTATTATG AAAACCTACA AAAGGAATTA TTGTCTCTGT ACAAAACGAA ACTGTACAAC
TAACTTCATA ATACTGGCAA GACTAGCGAA TTGGTCAGAT CATGAATGTC TGTTTTATGA TCAAATATTT TTCATACACT
GTTCAACCTT TCAGTTGATG AAGAAAAGGT AAGAGTTCAT TCATTTGGTG GTGCAGTGGA TAATGTTATC AGTGTTCAAT
CTTGCATCTT TTCCCTTCCC TTTTTCTTGT TATATAAGTT TGAGTAAGAG TAGGATTTGA CCACAACACA TTCATGATAA
TATGTTAGTT AAAGAATCTG TTTGACATAA TAGTTTATTG GATAAGTTTC AGCCTTTATG TGAATTCAAT GGAGGTCTTT
GCCTGCTTTC AGAATGAAGG GATGTCTGTG TTAGGGATCT AAAGAATGAA TTTGTTGATT GAATGAAATT AAATAGCAAT
AAGGAAAAAG AATTCTCCTC CAAGGACCAA GGCTTTCCCC TTTCTTAGGA ACTTGCTAAT TGCCTGCATA CCTTCTTTCC
TCTATCTGAG TAATTGATCC CCTTATGTGG ACTAACTACT TTATCTGTTG CCAACGTATT TCACCTTCAC TTCAGTTTCA
ACTCCTAGCA ATCTGTGCTA TTAATGAAAA ATAAAGGAGA GGCGGTAGTA ACTTACTCTT GTTGCTTTTA CTTTATTGAA
TAAATTAATC TACAAAAGGA TGACCACTGC TGCTTCAAAA TGCAAGGCAT CTACATAAAA TTATAACTTT CTTTCTACAC
ACAAATTATG AAATCTTGAT TAATTAGTGT TTCTTTCCAA TATTACTTGT TAATATTAAA TCTTTTCTGA GAAATATATT
ATTTCATTAT CCTCTCAGTA TCTCCATTAA TGCATCCAAC TCAAGAATGT TTGTATCCGG TTCTTGTGAT GCAACTGCTC
GATTGTGGGA TACTCGCGTG GCAAGTCGAG CAGTGCGGAC ATTTCATGGG CATGAGGGAG ATGTTAATGC AGTTAAATTC
TTTCCGGATG GAAATAGATT TGGAACCGGC TCGGATGATG GTACCTGCAG ATTGTTTGAC ATTAGGACTG GACACCAACT
TCAAGTATAT TATCAGCAGC ACAGTGACAA TGACATCCCG CCTGTGACTT CCATTGCATT CTCTGCATCA GGAAGACTTC
TTTTTGCTGG ATACACAAAT GGAGATTGCT ATGTTTGGGA CACTTTACTG GCAAAGGTAC TTGGTACTCT AGTGAAACAT
ATAACAACTT TAGGTTCCAT TCTTCTGGTT GCGCTATGAA TGAAATCGGT GTAGTATTTT AAAAGAACAT TTGTTTGCTT
CTTTGCAGGT GGTCTTGGAT TTAGGATCTC TTCAAGACTC TCATGACGAC AGGATCAGCT GTTTAGGTTT GTCAGCTGAT
GGGAGTGCTT TGTGTACAGG AAGTTGGGAC ACAAACTTAA AGGTGAGCAT GCATTTTGTG CACATTCAAT AAATCTTAGG
CTGTGATTCA CGGTTATTTA AGCCTTAATT CCTTCACGGT TTAAACTTTA AATAATTAGA TATTACCTCC AACACTACCC
AAAAAGAACA TGTTGATATT ATTCCTTACG AAGTTTTAGA GATTTAATAA CCACAACCGA AAGTTGGAAC ATCAAAACAT
GATTCCTTTA GAAATATAAA GGGCATGACT TTATGGAGAT TTTAAGGAGT CTGTAATTTC CAAAAGTTAA CATACTCATA
CAAGAATTGG TTAATTAGTA ATGTCAAGGG AACATTATGT TCTAGGATTG TCTAACCTAC GCATGGATAA CCATTATGCA
TTCTGTCAAT TGTATCCCAC AATGAAAATG TGGAAAAGCT TAACGGTTAA TTTTATATGA AGTGTAAGAG TGGTTGTTGA
TTGTAGATAG CTTTGGTTCA CTGGATACAT TTGCTAACTA CTTGTCCGTT TGCAGATATG GGCTTTTGGA GGGCATAGGA
AGACAACTTG AGCATTGGGG GGATGATAAA ATTGAAGATG AAGTGCGTGC TCTCACATAA CCCTTCATTT TAGGCTTGCA
ACTAGTGCAG CGGTTTGTTT ATGCTCATAT CTGTTTGTCC ACGTGTGATC TAAATAGTAC TTTTTCCATT GTACTACCCG
CTTCGGTAAC TATACCTTAA ACCAAAATGA AGGACTGTTT GTTTTCTGGT CTCAGCGTAG CACGCCTATA CATACCGATT
CCTCTTAATT ATGATGATTG TGAGTATTCT ATTTAAAGGA CCTGAAAGTG TCCCAAACTA TATTCAATCA AATATTTTAG
TTGTTTTAAT GAATATAAAT GGTATTTGTC CAGCAAAACC ATAATGTAGA CTACGACGAG GTATCCCTCT TCAATTATTA
GATTGAGTAG TCTGTCTCCT CAATGGTGTT ATCCATTGAA TGCAGTCGTT AAAACCTACT CAATCGCTTA TGCTGTAGCC
AGAGAAAATT GTAGAGCAAA ATACGATGCT CGATGCTCAT ATAAGATGAA ACTTTTGTAA CCAGTGATCT GTATGCAAGT
TTTGGTTTTA TATGGGTGTG GGGATTAAAG TTGTAG

>Vigan.06G221400.01
AACAATATTC TGTCATTTCC ATTGTCTTCT TCTGTCTCTA TTTTGAAGGC TACCAAACAC TCCCTTAACT CCAACATCCT
CAACCCAACT TCATCTTACA AATAATTAAC CTTTCCCATT AATTTGTTGT AAAACTAAAA TAAAAAGCAT GTTCAGAAAC
ATGGTCTTCC CAACAACAAC CTCTTCCCTT CTTCCTTAAT TGGTGTGCTT ATTTAGGGAG TCCAAATGTC TGTTGCGGAG
CTCAAAGAGC GCCACTCCTC TGCCGTCGAC ACAGTCAACA ATCTCAGGCA CCAATTGAAG CAGAAGCGTC TTTCTTTGCT
CGACACAGAT ATCTGTGAGT ATGCGAGGTC TCAGGGTAGA ACACCTGTGA CCTTTGGACC TACGGATCTG GTTTGCTGTA
GAACCTTGCA GGGTCACACG GGAAAGGTGT ATTCGTTGGA TTGGACTTCT GAAAAAAGTC AGATTGTTAG TGCATCTCAA
GATGGACGAT TAATAGTGTG GAATGCCCTA ACTAGGCAGA AAATCCATGC CATAAAGCTG CCTTGTGCGT GGGTCATGAC
ATGTGCTTTT TCACCAACTG GTCAGTCTGT TGCATGTGGT GGTCTTGACA GTGTGTGTTC TATTTTCCAT CTTAATTCAC
CCACTGACAA AGATGGGAAT CTACCTGTTT CCCGGATGCT TAGTGGACAT AAGGGTTATG TTTCCTCTTG TCAGTATGTT
CCAGATGAAG ATACTCATTT AATTACTGGT TCTGGTGATC AGACATGTGT TTTATGGGAT ATAACTACTG GCCTTAAAAC
ATCTGTCTTT GGAGGGGAGT TCCAGTCTGG ACACACTGCA GATGTATACA GTATCTCCAT TAATGCATCC AACTCAAGAA
TGTTTGTATC CGGTTCTTGT GATGCAACTG CTCGATTGTG GGATACTCGC GTGGCAAGTC GAGCAGTGCG GACATTTCAT
GGGCATGAGG GAGATGTTAA TGCAGTTAAA TTCTTTCCGG ATGGAAATAG ATTTGGAACC GGCTCGGATG ATGGTACCTG
CAGATTGTTT GACATTAGGA CTGGACACCA ACTTCAAGTA TATTATCAGC AGCACAGTGA CAATGACATC CCGCCTGTGA
CTTCCATTGC ATTCTCTGCA TCAGGAAGAC TTCTTTTTGC TGGATACACA AATGGAGATT GCTATGTTTG GGACACTTTA
CTGGCAAAGG TGGTCTTGGA TTTAGGATCT CTTCAAGACT CTCATGACGA CAGGATCAGC TGTTTAGGTT TGTCAGCTGA
TGGGAGTGCT TTGTGTACAG GAAGTTGGGA CACAAACTTA AAGATATGGG CTTTTGGAGG GCATAGGAAG ACAACTTGAG
CATTGGGGGG ATGATAAAAT TGAAGATGAA GTGCGTGCTC TCACATAACC CTTCATTTTA GGCTTGCAAC TAGTGCAGCG
GTTTGTTTAT GCTCATATCT GTTTGTCCAC GTGTGATCTA AATAGTACTT TTTCCATTGT ACTACCCGCT TCGGTAACTA
TACCTTAAAC CAAAATGAAG GACTGTTTGT TTTCTGGTCT CAGCGTAGCA CGCCTATACA TACCGATTCC TCTTAATTAT
GATGATTGTG AGTATTCTAT TTAAAGGACC TGAAAGTGTC CCAAACTATA TTCAATCAAA TATTTTAGTT GTTTTAATGA
ATATAAATGG TATTTGTCCA GCAAAACCAT AATGTAGACT ACGACGAGGT ATCCCTCTTC AATTATTAGA TTGAGTAGTC
TGTCTCCTCA ATGGTGTTAT CCATTGAATG CAGTCGTTAA AACCTACTCA ATCGCTTATG CTGTAGCCAG AGAAAATTGT
AGAGCAAAAT ACGATGCTCG ATGCTCATAT AAGATGAAAC TTTTGTAACC AGTGATCTGT ATGCAAGTTT TGGTTTTATA
TGGGTGTGGG GATTAAAGTT GTAG

>Vigan.06G221400.01
ATGTCTGTTG CGGAGCTCAA AGAGCGCCAC TCCTCTGCCG TCGACACAGT CAACAATCTC AGGCACCAAT TGAAGCAGAA
GCGTCTTTCT TTGCTCGACA CAGATATCTG TGAGTATGCG AGGTCTCAGG GTAGAACACC TGTGACCTTT GGACCTACGG
ATCTGGTTTG CTGTAGAACC TTGCAGGGTC ACACGGGAAA GGTGTATTCG TTGGATTGGA CTTCTGAAAA AAGTCAGATT
GTTAGTGCAT CTCAAGATGG ACGATTAATA GTGTGGAATG CCCTAACTAG GCAGAAAATC CATGCCATAA AGCTGCCTTG
TGCGTGGGTC ATGACATGTG CTTTTTCACC AACTGGTCAG TCTGTTGCAT GTGGTGGTCT TGACAGTGTG TGTTCTATTT
TCCATCTTAA TTCACCCACT GACAAAGATG GGAATCTACC TGTTTCCCGG ATGCTTAGTG GACATAAGGG TTATGTTTCC
TCTTGTCAGT ATGTTCCAGA TGAAGATACT CATTTAATTA CTGGTTCTGG TGATCAGACA TGTGTTTTAT GGGATATAAC
TACTGGCCTT AAAACATCTG TCTTTGGAGG GGAGTTCCAG TCTGGACACA CTGCAGATGT ATACAGTATC TCCATTAATG
CATCCAACTC AAGAATGTTT GTATCCGGTT CTTGTGATGC AACTGCTCGA TTGTGGGATA CTCGCGTGGC AAGTCGAGCA
GTGCGGACAT TTCATGGGCA TGAGGGAGAT GTTAATGCAG TTAAATTCTT TCCGGATGGA AATAGATTTG GAACCGGCTC
GGATGATGGT ACCTGCAGAT TGTTTGACAT TAGGACTGGA CACCAACTTC AAGTATATTA TCAGCAGCAC AGTGACAATG
ACATCCCGCC TGTGACTTCC ATTGCATTCT CTGCATCAGG AAGACTTCTT TTTGCTGGAT ACACAAATGG AGATTGCTAT
GTTTGGGACA CTTTACTGGC AAAGGTGGTC TTGGATTTAG GATCTCTTCA AGACTCTCAT GACGACAGGA TCAGCTGTTT
AGGTTTGTCA GCTGATGGGA GTGCTTTGTG TACAGGAAGT TGGGACACAA ACTTAAAGAT ATGGGCTTTT GGAGGGCATA
GGAAGACAAC TTGA

>Vigan.06G221400.01
MSVAELKERH SSAVDTVNNL RHQLKQKRLS LLDTDICEYA RSQGRTPVTF GPTDLVCCRT LQGHTGKVYS LDWTSEKSQI
VSASQDGRLI VWNALTRQKI HAIKLPCAWV MTCAFSPTGQ SVACGGLDSV CSIFHLNSPT DKDGNLPVSR MLSGHKGYVS
SCQYVPDEDT HLITGSGDQT CVLWDITTGL KTSVFGGEFQ SGHTADVYSI SINASNSRMF VSGSCDATAR LWDTRVASRA
VRTFHGHEGD VNAVKFFPDG NRFGTGSDDG TCRLFDIRTG HQLQVYYQQH SDNDIPPVTS IAFSASGRLL FAGYTNGDCY
VWDTLLAKVV LDLGSLQDSH DDRISCLGLS ADGSALCTGS WDTNLKIWAF GGHRKTT*