Variant information

Chr06:35291255 - 35295610

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
35291423CT431893.771.00UTR_3_PRIME(|417||None|Vigan.06G221400.01), UTR_3_PRIME(|652||None|Vigan.06G221300.01)Vigna nepalensis
35291433GT441976.771.00UTR_3_PRIME(|407||None|Vigan.06G221400.01), UTR_3_PRIME(|662||None|Vigan.06G221300.01)Vigna nepalensis
35291434AC431951.771.00UTR_3_PRIME(|406||None|Vigan.06G221400.01), UTR_3_PRIME(|663||None|Vigan.06G221300.01)Vigna nepalensis
35291833CT552227.771.00UTR_3_PRIME(|1062||None|Vigan.06G221300.01), UTR_3_PRIME(|7||None|Vigan.06G221400.01)Vigna nepalensis
35292219TC481974.771.00DOWNSTREAM(|204||None|Vigan.06G221300.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35292313AC421705.771.00DOWNSTREAM(|298||None|Vigan.06G221300.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35292694GA622459.771.00DOWNSTREAM(|4671||None|Vigan.06G221500.01), DOWNSTREAM(|679||None|Vigan.06G221300.01), SYNONYMOUS_CODING(SILENT|atC/atT|I295|None|Vigan.06G221400.01)Vigna nepalensis
35293266TA612466.771.00DOWNSTREAM(|1251||None|Vigan.06G221300.01), DOWNSTREAM(|4099||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35293374GT622582.771.00DOWNSTREAM(|1359||None|Vigan.06G221300.01), DOWNSTREAM(|3991||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35293726TC501961.771.00DOWNSTREAM(|1711||None|Vigan.06G221300.01), DOWNSTREAM(|3639||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35293738CA451814.771.00DOWNSTREAM(|1723||None|Vigan.06G221300.01), DOWNSTREAM(|3627||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294374TC532126.771.00DOWNSTREAM(|2359||None|Vigan.06G221300.01), DOWNSTREAM(|2991||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294412TG461914.771.00DOWNSTREAM(|2397||None|Vigan.06G221300.01), DOWNSTREAM(|2953||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294463GA783001.771.00DOWNSTREAM(|2448||None|Vigan.06G221300.01), DOWNSTREAM(|2902||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294490GA753405.771.00DOWNSTREAM(|2475||None|Vigan.06G221300.01), DOWNSTREAM(|2875||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294500GA773502.771.00DOWNSTREAM(|2485||None|Vigan.06G221300.01), DOWNSTREAM(|2865||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294501AT773478.771.00DOWNSTREAM(|2486||None|Vigan.06G221300.01), DOWNSTREAM(|2864||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294548GA732863.771.00DOWNSTREAM(|2533||None|Vigan.06G221300.01), DOWNSTREAM(|2817||None|Vigan.06G221500.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35294690CT712897.771.00DOWNSTREAM(|2675||None|Vigan.06G221500.01), DOWNSTREAM(|2675||None|Vigan.06G221300.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis
35295035GA491912.771.00DOWNSTREAM(|2330||None|Vigan.06G221500.01), DOWNSTREAM(|3020||None|Vigan.06G221300.01), INTRON(|||None|Vigan.06G221400.01), SPLICE_SITE_REGION(|||None|Vigan.06G221400.01)Vigna nepalensis
35295302AT401546.771.00DOWNSTREAM(|2063||None|Vigan.06G221500.01), DOWNSTREAM(|3287||None|Vigan.06G221300.01), SYNONYMOUS_CODING(SILENT|cgT/cgA|R28|None|Vigan.06G221400.01)Vigna nepalensis
35295346CT411490.771.00DOWNSTREAM(|2019||None|Vigan.06G221500.01), DOWNSTREAM(|3331||None|Vigan.06G221300.01), NON_SYNONYMOUS_CODING(MISSENSE|Gtc/Atc|V14I|None|Vigan.06G221400.01)Vigna nepalensis
35295400TC491994.771.00DOWNSTREAM(|1965||None|Vigan.06G221500.01), DOWNSTREAM(|3385||None|Vigan.06G221300.01), START_GAINED(|||None|Vigan.06G221400.01), UTR_5_PRIME(|15||None|Vigan.06G221400.01)Vigna nepalensis
35295441GA512016.771.00DOWNSTREAM(|1924||None|Vigan.06G221500.01), DOWNSTREAM(|3426||None|Vigan.06G221300.01), UTR_5_PRIME(|56||None|Vigan.06G221400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
35292328CCAT442019.731.00DOWNSTREAM(|314||None|Vigan.06G221300.01), INTRON(|||None|Vigan.06G221400.01)Vigna nepalensis