GBrowse Details

Vigan.06G160900.01

Basic Information:
Name: Vigan.06G160900.01
Multiple alignment
Variant Information
Position: Chr06:29379389..29386562 (+ strand)
Length: 7174
Functional Information:
Description: Similar to Uncharacterized protein. [I1LKN7, Glycine max]
GO: Biological Process: nitrogen compound metabolic process (GO:0006807)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)
InterPro: Nitrilase/cyanide hydratase, conserved site (IPR000132)
Carbon-nitrogen hydrolase (IPR003010)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:152.13,72.33,20.53,37.78,18.06,64.54,29.92,23.44
Arabidopsis thaliana homolog: AT5G22300.1
Automatic updates:
Name: NM_001254658 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bifunctional nitrilase/nitrile hydratase NIT4-like (LOC100810230), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:29379389..29379472 (+ strand)
Length: 84
Type: five_prime_UTR
Position: Chr06:29379473..29379617 (+ strand)
Length: 145
Type: CDS
Position: Chr06:29379782..29379961 (+ strand)
Length: 180
Type: CDS
Position: Chr06:29384378..29384671 (+ strand)
Length: 294
Type: CDS
Position: Chr06:29385306..29385587 (+ strand)
Length: 282
Type: CDS
Position: Chr06:29386147..29386298 (+ strand)
Length: 152
Type: CDS
Position: Chr06:29386299..29386562 (+ strand)
Length: 264
Type: three_prime_UTR

>Vigan.06G160900.01 class=Sequence position=Chr06:29379389..29386562 (+ strand)
TGAAGTTCCA TAAGAAAAGA AGGATCGTGA TGGTTGAAAC AAGAAGTAGA GAGGATCAGA AGAGAGTGTG AAGCTGTGAA
AGAGATGGCG CTCGTAACAA CAGAGCCAAC CATAAACGAA GGGCCTCTGT TCGCCGAAGT TGACATGGCT TCGGATTTCA
ACGCCCCCAC TGTTCGAGCC ACCGTTATTC AAGCTTCCAC CATCTTCTAC GACACTCCAG CCACTCTAGG TCCTTCTACT
CTTCCCTTTT CATCCGTTAC CCTTTTTCTC TTTCTTCTCA AATTTCCCTT CTTTTCGTAT TTCTGTGTTG AAAGCGCCAT
CTGGGGTACT CCGGATTCGA GAAGTTATGT AATTTGTTGG GAAATTAAAT TGGTTGGTGA TTTCTGTGTG CAGATAAGGC
AGAAAGGTTG TTGGGTGAAG CCGCAGGGCA TGGGTCCCAG CTTGTGGTGT TTCCAGAAGC GTTTGTGGGA GGGTACCCGC
GTGGTTCCGA TTTTGGGGTT TCTATTGGAA ATCGCACGGC CAAGGGAAGA GAAGAGTTTC GCAAGTATCA TTCTGCAGCC
ATTGATGTGC CTGGTAAGGC CTAAGATCAA ACACTCGTTG CAGTTCAGTT GCTAACTTTC TTTATGTTGA AACTAATTAC
TATAAAACAG ATAGGAAAAA AAAAACTTAT TTGCATTCAC TTTGGACACC TGAATCAAGT TCAAACTCCA AGACATGATA
TATTAGATAA ACATTCACAT TTTGTTTCCA GGTTTAAGAA TTGATCATGA GAGAAAAAAG GTCCAATGAT TAGCATATTT
CTGTTGAAAT TGTATTTACC AGATGTTTGA TGTTACTGTG TCTGTAACTG ACATCTGATT ACTGCTAAAT TTCTGCCTTC
GTGTTTCTAT CTTCTTCTTT CTTTTTTTTT TCTCAAGGCA GAGAAATTGA ACCTAATCAA ATGCCTAGTT TGTTCAATGT
ACATGGGGGC ATGGATCACA AACTTTAGCC GAAATTTATT ACTAATTTAC TATTCTTAGT GCAAATATAA TAGAGCACGA
TTCAGGTTTA ACAAGTAAAA CATGAATAAG AGAATAAGGA TTTAGGATTT ATTTAATTGT TATTTTAGAG TCAAATTTTC
TGCTTTTCTT ATTTTTTTAT GTATATGTTC AAAATTTTAA TATAATTTTG TATTCAAGGT AAGATCTTAG TTCCGTATTA
AACTTTTAAA GGTAACAATT GGTTGCGCTA ATGTCAACTA ACATTTTTTC TATCTTATAA ACATATAAAG GGTTGCGGGA
ATCAATATGC TCTCTGCTGA GAATTTTTGA TCTAGGTCTG TTTGGTATTA TGTGAAGTAT AGGTGAAAAT TTTAAGAATT
CTTTTACCTT TATTCTATCT TTTATCCAAC TTAGATTTGT CAAAGTGGGC TAAAGTCAGT TATTCAACCC TCCTCATGGG
TATGAGTTAA ATTAGACTAG AAAACTTACA ATTTTTGGTA TGGGTTGAAG TTGAACTTAA TCTACTAAGA ATCTGACTCA
CCAGAGTTGA ATCCGTGATG CTGACTCGCT AATTCATGAT AAAAAAAATA AAAAAGACTT AATAGCATTT TTTGTCTTGT
ATTTGTAGCA ATGATTCAAT GTTTTTTCTC TATTTATTTT TTATTTAATG TGGTTCCTAT ATTTTATTTA AAAGGACTCG
GTCCTTCTGT TATATCAAAG TTAGCGCCAT TCCTCTTATA TCACACCCTT GAGATTGAAC AATAAACTTG GATTGAACAA
AAACACCTGA AAAATAACGG GTGATTATTT TAGCAGATGT CAATTCATCT TCTTCTAAAT AAAACTATCT AAGGATGAGT
CTATTTAAAA AATACAAGGA TCACATCGAT TAAAAAATAA AAGATCACCA AATATAGAGA CCAAATTTAC CAAGCCCAAC
ACAATTAAAA TAAATGGGGT GAGGAAACAC ACATTCTCAC AGTTTCAATA TCTCGAGCTC TCCTTCTCCT TCACTTTTTT
TTTCTCTCAA AATCAAAATC TCTCAATTAG CATGTTCTTT TAAATTTAAG ATGTATTTGC CTATTTGAGT TTTTATTTTG
AAATAAATAT GTTGAATTAA TTTTTGAGAT TATTTAAATT TTATTTGGAT TTAATTGGAA TTATCATTTA GTATTTATGT
TTGGTATGCA TATTAATGAT ATTTACAATT GTCAATTACA TGTATTGTTC CTTACAATGA AATTTGCTGG TATTGCTTTT
CCTTTATTCT CTTTCTTTAT CGGTTATTAG ATTTTTCTTT CTGTCATTAC ATTATATAAA CACTCATGCA TTATTTGATA
ACTTTCTTCG CAAAATAGTT ATGATGAATT TCCAATTAAC TAATTACTGA ATTATTATCT ATATCTTCAA TATTACTGAC
ATAAGAGGAC CATAAGTTTT TCAAACGGTT GTTTAAGCCT AAGAACTAAA GCAAAAAAAA ATATTAAGGA AAAGAGGATT
TTATTTTTGA TCTACTACCA GTTTTCCCTA ACCTACTAGG TTAAAAACTA ATCCTTCCCA ATACTCGTTG GTTCAGCGAG
TTTTTGCACA CGGTGGAATC AAATATAGGT TTTTCGTTGC ATGAATCATC CCAGAATACG TGAGAACAGG GTGTCTATAA
AGATTTACCT ATTAAAAGGT TGAAAATATT GTATTAGTCT TACTTTGTTT TAAACTTGAT TTTTTTTCAC TACCTCTAGA
AATTTTGAAT TCTTTTTTTA AATTCATATA GTTGTTTTAT TTGAGTGTAA TGTGAATAGG AAGTTGCACA ATAGATAAAG
ATAGACGAGT TGAATAATAT ATAAATAAGA AAACCCACAA AATTAATAAT ACCTTGGGTT TTGGGTTGTG TATAATGTCA
AACTCACGTG TGTGGTCGTT TTGAGTTCCT TTCAATTTGT AGTTCTTTTT TTTAGTTTGT TGTGGAAATA GCTCAAACAA
GCTCACTAGA CCGTCTACAA CACAAAAGAA CAACACAATA TCAGAGAAAA CCCACGAAAA ACAACTAGAT GGTTATACAA
GAAACACAAA GAAAATAATG TGGTTCAGTT GAAGTATTAA CGAAATTCAA TTTATGTCTA TAGTGAGAAA TTCACTATTA
AATAAAGATT ACAACTCAAA GTTTCTCTCT AAGTAAACTC TGAACTCTCA GATTCGTTAA AACAGTTAAT ACAAGGTCTT
ATTTATACTG AAATAACTGT CATAACTAAC TTGCATAATA TCGCCTAAAC CAGTGGAGAA GTCACATGAA CCATGCTCCC
ACCGCTGAAC TTGAAAGTCA AGTAGGCAGA CTCTCAAATG ATAGATGAAG GAAGTCACAA TCTGATGTAG AGTAGACATT
ATGATACTAT GAGACTATCT AGGAACCTTA AAAATATTTT TTACTGAGTT AATATTCACA GAGTTATAAT TTTATTATTG
AATATATTGA AAAACTATGT ATTATAATTT TATTATTGAA TATAGTGAAA AACTATGCAT GAGATTAATC TTTCTTGTGT
AGAAAATACA TATAGAGTAC TTTATAATGA AAGAAATATA GGTTAAACCC ATAGTGCAAA CTTCAATCGG TTGGAAATTT
TTTCAAAAGA ACCTTAGGCT CTAGATATAT GTTAAGAAGT GGACTTTAAA CCTAATTCAA CTCCATAAAA CTGGCTTATA
AAAGGAGGTT CGCATCCACT TATATACTGT AAATTGGTCT TATCTCTAAT CAATGTGGGA CTTCCAACCC ATCCCTCTCA
CGCTGATAGC GACCGGAACA ATATGTCTAA CAAACAACAA ATTTCGTCAG GATAGGTTCC AACAATGGCT CTGATACTAT
GTTAAGAATA TAATGAAAAA CTATGTATGA AATTAATTTC CCTTATGTAG AAAATACATG TAAGGTACTT TATTTATAAT
AAAAGATAAA TATAAGATAT CTAATAATCT AAGATATCTA GCAAAGCTTC GTGCTATCAA AACTAAAGCA CGGAGAAAAT
CCATATGTTA AACCGTGGAT TCTTCCCTTA AAGCTTAGGA TAGCTGGTCC ACATCTTGGA ACAACCTCCC AAGGTTCTCA
TCATGATTCG TGAGTGAATC TCTTTCTTCC ACTTCAATTT CTAATAAGCT CAAACAAGTA CAATGAAGGA CACATTGAAC
GGCAGATTGT CAGTTGAGAA ACATATAAGC TATCAAAACT AAAGCACGGA GAAAATCCAT ATGTTAAACC GTGGATTCTT
CCCTTAAAGC TTAGGATAGC TGGTCCACAT CTTGGAACAA CCTCCCAAGG TTCTCATCAT GATTCGTGAG TGAATCTCTT
TCTTCCACTT CAATTTCTAA TAAGCTCAAA CAAGTACAAT GAAGGACACA TTGAACGGCA GATTGTCAGT TGAGAAACAT
ATAACTGAAG AAAACTCTCA AACTTAATGC CTCAAGGATC TTTTATTATG ATGGTGTCAA ACACACTTGT ATGGTTGGTT
CATAGTACAT TGGTGAAGAT TTCTCGTCGT TTTTCCCATT AGATTCCCAA TAAATGGTAT TAAATCAATG GAGGATACTT
AAAAGGGAAA TTTGTTAATT GAAAAACATA TAAGATTTTG GGTCTGCCAA TCACATTTGT ATGGTTGGCT CATGGTCCTT
TAGTGAAGAT CTCGTTTTGC TTCTCCCCCT TGGATTACCA ATAATTTCAA ATATTATAAA ACCATGTCCT TTCAAATCTT
TTAAATTGGT ATATACAACT CCAATAAAAT TCATACAACA AAATCTTAGT CATAAAAGTC TTAACAAAAA TTATTAGTAG
TAAAATTCTT CAACATACCC AAGTCCCTGA AGTTATTAGC AAATTTTGTA TCGTTGTAGG TCCTGAAATT ATTACTCGTT
GATTTTGAAT GACAATATTT CAAAAAAAAC CATGTCCCTG TAAATATTAC TCATTGAGTT TTAAAGATCC AAGTTAGTGT
TTCCATTAAC AAATGTTGTA TTGTTGTAGG TCCTGAAGTT GATAGATTAG CAACAATGGC AGGGAAGTAT AAAGTACATT
TAGTGATGGG TGTGATAGAG AGGGATGGCT ACACACTTTA TTGCACCGTT CTATTCTTTG ATTCTCAAGG TCATTACCTG
GGAAAGCACA GGAAAATCAT GCCAACGGCA TTGGAGCGGA TTATCTGGGG ATTTGGGGAT GGATCAACCA TTCCCGTGTT
CGAAACTCCC ATTGGAAAGA TAGGTGCTGC CATTTGCTGG GAAAACAGGA TGCCACTATT AAGGACTGCA ATGTATGCCA
AAGGTTGGAG TTCTTTAGTT TTTCTATCTT CTTGTTACAC TCAGTGTTGT AGCATTGTGC TTTTTCTTGT ATTGGGACTG
GTTCTTCACA AGTATAGTGT GCTATCATGT TTTGTGTAAA AAAAGTTTTT ACAGTATCAT CTAATTAGAA ATTATTTTTG
CTACCATGTT TAACATAGTT ACTATTAAAA TCAACAAATT TACCATGACG ATTTGTTATC AGATGATAGA GTGAAAGACT
TTTACACTGT AAGCACATGT ATTATTTGTT CTTATGCTTT TTCTAATGCT ACGGGGATTT GTTAATGTAA AGATGTTTCA
CTGTCAACCA ATTTAAAATA GAGAAAATAA TCTATCGACT GACCGTGTAA AGAATATTTA CTCTGTCATC CAATAACAAA
TTATGTATGA TAAATTTGCT GACTATTACC CTAATTAGCT TAAAAACACA CTGACTGTGA TTTTTTATTG GCTAACATAG
TCAAAGTTTT AACACTATGA TTGCATAGAA ATTAAGCTTT AAAAAGTATG ACTTTTAGAG TATCTATTGC AACAGTGAAT
AATTTTAATC ATGACAATTC ATGATTAGAT GTCATTTGTA TATATCAAGA CATTCTAATT AAATCTCCAT GCAATAGGTA
TAGAGATATA CTGTGCTCCT ACAGCTGATG CCAGGGATGT GTGGCAAGCA TCAATGACCC ACATTGCACT TGAAGGTGGA
TGTTTTGTTT TGTCAGCAAA CCAGTTCTGT AGGAGAAGGG ATTACCCTCC CCCTCCAGAG TATGTTTTTG CTGGCACAGA
AGAGGACCTG ACACCTGATT CTGTTGTATG TGCTGGGGGT AGTGTCATTA TATCACCATC AGGGGCTATT CTGGCTGGAC
CAAATTATGA TGGGGAGGCA CTAATCTCAG CAGACCTTGG TATGTCATGT TTACTCTAGC TGCTTCCATT GTCTTACAAT
GCTCAGAAGA GTATTACTTT CTTTGATGAT GTTTTTGTTG GGGAACAAGG GTTTTAAAGG TATGTACCAA AAGAAAACAG
CAAAGGAATA CCCTATAACT CTATACCAAT GTCTATATAG TAGTTAGAAA GATAATTAGA AAGGATGGTA GTTAGACAAT
ATATAAATAA CAATGTCTAT AACTCTATAA CAATAGCAAA GGGATACCCT ATTTTGTTTA CTTATTTTAC CTCTTTTAAC
TACTATAAAT CTAACAGAAT GTCTCTTTCC CCTAGTATAA ATAAAGGGTT TGAGGTATTA TGTGGGCAGT GAGATTGATT
TGTAACTAAC TGATAATAAT AGTAATAATA ATTACTTCTT CAATCTTCCA TAGTATTTCA CTTTTTTCCC TCAAACTCTT
CATTCTGGAG TTTGCTGAGC TTGTTTTTGA TTGGTTAAGA TATTCTCTGT GTGACCACTT TCTTTGTCTT TGGTTATTGA
AAGCTATTAA CGCTGTGATT CTTGAAAATT TTGAACAGAT CTAGGAGAAA TAGCAAGAGC TAAGTTCGAT TTTGATGTGG
TTGGACACTA TTCAAGGCCA GAAGTGCTTA GCTTGACTGT AAAGGACCAT CCAACGAATC CAGTCACTTT TACATCAACA
TCAAAAAAAA TTGAGGACAA CACCAAGTAG TGTCTTTCTT TCATGTTCAG CAACTTCTGA ACCTGACACC TTTGTATTTT
AACGTTTGTG TTTCATATAT GGAAGTTGTT TGGGCTTTAG CTTGTACTGT AAGCTCTTGC ATTTTGGTTT GGTTTATATG
ACCACATTAA AAGGATAAAT TCAGACACCA AAATAAGGGT TTTCAAAATT CAGCTTTTTA AAGAAAAAAC TAAACTGAAT
GTTAAACAAT TGTGTACAAA GAGAACCTTT CTATAAAAGT ACTTTTGCTC GAAC

>Vigan.06G160900.01
TGAAGTTCCA TAAGAAAAGA AGGATCGTGA TGGTTGAAAC AAGAAGTAGA GAGGATCAGA AGAGAGTGTG AAGCTGTGAA
AGAGATGGCG CTCGTAACAA CAGAGCCAAC CATAAACGAA GGGCCTCTGT TCGCCGAAGT TGACATGGCT TCGGATTTCA
ACGCCCCCAC TGTTCGAGCC ACCGTTATTC AAGCTTCCAC CATCTTCTAC GACACTCCAG CCACTCTAGA TAAGGCAGAA
AGGTTGTTGG GTGAAGCCGC AGGGCATGGG TCCCAGCTTG TGGTGTTTCC AGAAGCGTTT GTGGGAGGGT ACCCGCGTGG
TTCCGATTTT GGGGTTTCTA TTGGAAATCG CACGGCCAAG GGAAGAGAAG AGTTTCGCAA GTATCATTCT GCAGCCATTG
ATGTGCCTGG TCCTGAAGTT GATAGATTAG CAACAATGGC AGGGAAGTAT AAAGTACATT TAGTGATGGG TGTGATAGAG
AGGGATGGCT ACACACTTTA TTGCACCGTT CTATTCTTTG ATTCTCAAGG TCATTACCTG GGAAAGCACA GGAAAATCAT
GCCAACGGCA TTGGAGCGGA TTATCTGGGG ATTTGGGGAT GGATCAACCA TTCCCGTGTT CGAAACTCCC ATTGGAAAGA
TAGGTGCTGC CATTTGCTGG GAAAACAGGA TGCCACTATT AAGGACTGCA ATGTATGCCA AAGGTATAGA GATATACTGT
GCTCCTACAG CTGATGCCAG GGATGTGTGG CAAGCATCAA TGACCCACAT TGCACTTGAA GGTGGATGTT TTGTTTTGTC
AGCAAACCAG TTCTGTAGGA GAAGGGATTA CCCTCCCCCT CCAGAGTATG TTTTTGCTGG CACAGAAGAG GACCTGACAC
CTGATTCTGT TGTATGTGCT GGGGGTAGTG TCATTATATC ACCATCAGGG GCTATTCTGG CTGGACCAAA TTATGATGGG
GAGGCACTAA TCTCAGCAGA CCTTGATCTA GGAGAAATAG CAAGAGCTAA GTTCGATTTT GATGTGGTTG GACACTATTC
AAGGCCAGAA GTGCTTAGCT TGACTGTAAA GGACCATCCA ACGAATCCAG TCACTTTTAC ATCAACATCA AAAAAAATTG
AGGACAACAC CAAGTAGTGT CTTTCTTTCA TGTTCAGCAA CTTCTGAACC TGACACCTTT GTATTTTAAC GTTTGTGTTT
CATATATGGA AGTTGTTTGG GCTTTAGCTT GTACTGTAAG CTCTTGCATT TTGGTTTGGT TTATATGACC ACATTAAAAG
GATAAATTCA GACACCAAAA TAAGGGTTTT CAAAATTCAG CTTTTTAAAG AAAAAACTAA ACTGAATGTT AAACAATTGT
GTACAAAGAG AACCTTTCTA TAAAAGTACT TTTGCTCGAA C

>Vigan.06G160900.01
ATGGCGCTCG TAACAACAGA GCCAACCATA AACGAAGGGC CTCTGTTCGC CGAAGTTGAC ATGGCTTCGG ATTTCAACGC
CCCCACTGTT CGAGCCACCG TTATTCAAGC TTCCACCATC TTCTACGACA CTCCAGCCAC TCTAGATAAG GCAGAAAGGT
TGTTGGGTGA AGCCGCAGGG CATGGGTCCC AGCTTGTGGT GTTTCCAGAA GCGTTTGTGG GAGGGTACCC GCGTGGTTCC
GATTTTGGGG TTTCTATTGG AAATCGCACG GCCAAGGGAA GAGAAGAGTT TCGCAAGTAT CATTCTGCAG CCATTGATGT
GCCTGGTCCT GAAGTTGATA GATTAGCAAC AATGGCAGGG AAGTATAAAG TACATTTAGT GATGGGTGTG ATAGAGAGGG
ATGGCTACAC ACTTTATTGC ACCGTTCTAT TCTTTGATTC TCAAGGTCAT TACCTGGGAA AGCACAGGAA AATCATGCCA
ACGGCATTGG AGCGGATTAT CTGGGGATTT GGGGATGGAT CAACCATTCC CGTGTTCGAA ACTCCCATTG GAAAGATAGG
TGCTGCCATT TGCTGGGAAA ACAGGATGCC ACTATTAAGG ACTGCAATGT ATGCCAAAGG TATAGAGATA TACTGTGCTC
CTACAGCTGA TGCCAGGGAT GTGTGGCAAG CATCAATGAC CCACATTGCA CTTGAAGGTG GATGTTTTGT TTTGTCAGCA
AACCAGTTCT GTAGGAGAAG GGATTACCCT CCCCCTCCAG AGTATGTTTT TGCTGGCACA GAAGAGGACC TGACACCTGA
TTCTGTTGTA TGTGCTGGGG GTAGTGTCAT TATATCACCA TCAGGGGCTA TTCTGGCTGG ACCAAATTAT GATGGGGAGG
CACTAATCTC AGCAGACCTT GATCTAGGAG AAATAGCAAG AGCTAAGTTC GATTTTGATG TGGTTGGACA CTATTCAAGG
CCAGAAGTGC TTAGCTTGAC TGTAAAGGAC CATCCAACGA ATCCAGTCAC TTTTACATCA ACATCAAAAA AAATTGAGGA
CAACACCAAG TAG

>Vigan.06G160900.01
MALVTTEPTI NEGPLFAEVD MASDFNAPTV RATVIQASTI FYDTPATLDK AERLLGEAAG HGSQLVVFPE AFVGGYPRGS
DFGVSIGNRT AKGREEFRKY HSAAIDVPGP EVDRLATMAG KYKVHLVMGV IERDGYTLYC TVLFFDSQGH YLGKHRKIMP
TALERIIWGF GDGSTIPVFE TPIGKIGAAI CWENRMPLLR TAMYAKGIEI YCAPTADARD VWQASMTHIA LEGGCFVLSA
NQFCRRRDYP PPPEYVFAGT EEDLTPDSVV CAGGSVIISP SGAILAGPNY DGEALISADL DLGEIARAKF DFDVVGHYSR
PEVLSLTVKD HPTNPVTFTS TSKKIEDNTK *