GBrowse Details

Vigan.05G236800.01

Basic Information:
Name: Vigan.05G236800.01
Multiple alignment
Variant Information
Position: Chr05:28243763..28248744 (- strand)
Length: 4982
Functional Information:
Description: Similar to Serine glyoxylate aminotransferase 2. [T2DNB8, Phaseolus vulgaris]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: pyridoxal phosphate binding (GO:0030170)
InterPro: Aminotransferase, class V/Cysteine desulfurase (IPR000192)
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421)
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (IPR015422)
Pyridoxal phosphate-dependent transferase (IPR015424)
Aminotransferase class-V pyridoxal-phosphate binding site (IPR020578)
Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase (IPR024169)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:47.48,0.23,51.61,479.95,0.14,30.48,0.95,50.87
Arabidopsis thaliana homolog: AT2G13360.1
Automatic updates:
Name: DQ167250 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max enzymatic resistance protein mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001250119 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine glyoxylate aminotransferase 3 (SGT3), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001289347 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine--glyoxylate aminotransferase-like (SGT2), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:28243763..28243940 (- strand)
Length: 178
Type: three_prime_UTR
Position: Chr05:28243941..28244078 (- strand)
Length: 138
Type: CDS
Position: Chr05:28244569..28244779 (- strand)
Length: 211
Type: CDS
Position: Chr05:28244987..28245353 (- strand)
Length: 367
Type: CDS
Position: Chr05:28246236..28246520 (- strand)
Length: 285
Type: CDS
Position: Chr05:28247280..28247484 (- strand)
Length: 205
Type: CDS
Position: Chr05:28247485..28248744 (- strand)
Length: 1260
Type: five_prime_UTR

>Vigan.05G236800.01 class=Sequence position=Chr05:28243763..28248744 (- strand)
GTGAGATTGG TTGTCTTACA AATATATATT ATGTGAATGA TGATAATGAT AAAAATTAGA AGGCAATGAA GGTGCAAGAA
ACTTGGAATA TGGATAACCT TTTGGCTTTT AGAGATGAAG CTAAATTGTT GATATGATGT GCCATTTCAC AGCCAAAACT
GAGAGGTTCC CTCTTCATCC ATTCTCAGCC TCAAGGTTCA AAGTTTCTCC CTCTTATCTT CTACCTGTGA CATGGCCTGG
CCCCACCTTA GCATTTCATT GGTTCACCAT AGCTCTTCAT CATAAAAATT CAATTTTCCC ATTTATACTT TTATATAATA
AGCTTCTAAC AACACCAGAC ACACCTCCTG CTTGCTTCTG CCACATTCCT CAAAAACTCT GTAAAGCTCC TCCTTCCCAC
CTATACTCAC TTCTTCTCAT TCTTTTTTCA TATACATATA TATTATGTTG TGTGTGTGTG TTTAGTTGGC TCTTTCCATT
GGATTTTGGT AAGAATGATT TTAAACTCAT GCTCTGTGTT ATTATCTTTA CTGTAAAATT GGCTTCGAAG TGGAAAAATC
GAGTGGGGTG ATCGGTAATC ACAGTTTTCT TCATGTTTTA ATTTAGTTAC TGGTGTGCAA GTTTCAACTC AAAGCAGGTC
TTTCCTCTTG TTCTGTCCAC CAATATATTC TGCTGTGTTT TCTTCATTAT ACAGTGTGTT TTGTTATAAT CTTGTTCTCA
ATGAATTTTC TGAAAGCAGG ATTCAGTTGT GCATCAGTTC TAATATTTTA AGATGATGAT TTTAGTTTTT CTTATTAATT
GCAGAAAAGG GTGTCTAAAA GATAGACACA GAAAGCATAT TTTGAATGAT AAATGTAAAA GCACAACAAA GCTGTTGATG
AAACAGGATA CTTTTTATTA TTTTTTTCTT ATATTATGGT GCTGTTAAAG GTCATCCATA CAGTTACATA ATGATAAGCA
TTAAACAGTT TCTGTTCTCT CCTTTAAATC AACTTTGTGT AACTTAACTT CTGAACTAGG TTCTTTTAGC AGTTAAACAT
GAATTTCCTG TGTTATTAGT TGGAAAACTC ATTAAGGTTC GTGTTTCTGT CACAAATCTC CTCAAGTAAG GAACAATAAA
ACAGTAAATA GCAGTGCATG CACAAAGTTT ATGATAAAAG ATTCAGAAGG TGGTTAAAGC TGACTTTTTG ATGGATTTTG
TTTAGGGGAC TCTTTGTGTG AAAATTCAAA AGAAGTGGTT GAAATTTGAA GCAAGAGAAG ATGGACTATT TCAATGCACC
AGGAAGAAAC CACCTCTTTG TTCCAGGGCC AGTTAACATC CCTGACCAGA TCATTAGGGC CATGAACAGA AACAATGAGG
ACTACCGCTC TCCAGCTATT CCTGCTCTCA CAAAAACTCT GCTTGAGGAT GTCAAGAAGA TTTTCAAGAC CACTACTGGA
ACCCCATTTC TCATCCCTAC AACTGGTATG CATAAACAAG CCACACTGAT CTTAGTGTTG TTATGTCTAT ACTTTTTTTA
GTTTCATAAA CTCAAGATAT AAGTGACTTT TTACTTCATT CCTTAACATT TTCTGTGTAT GCTCAAAATT AATGAAGAAT
CTATCTTGTA TGCTTTGAAA ATGTTAAGGA TGAAGTGCAT GTTTTTCATA TCAGGGATTA TGTTGTAAAT AACAAAAATT
TAAGGGTGTT TTTTGCAATT TTCATAAAAT CAATTAGGCT GTATTATCTT AATGATGAGG ATGATACTAA CTTTAATGGT
TATACTTTTA GGTTAAATTA ACCAGAGCAA GTCCTTGAAC TATTTGAAAA TTTTAATTAG CTTAGGAGAC TCAAAAGTAT
AATTAGATCT TTGATATAGT AATATTCCTT TCAGTTGAGT CCCTGGATTA AAATCACCAC AAATTGTCAT TTTTTATCAC
AAACCAATTT CAGAGATCTA ACACAAAATT CTTACAAAAT CAAGGACCCA GTTATAGTTT TTTATATTAG ATTTGAAAGT
TTACATTATT TATTCATGAA AATAATGGCA AGACTCCTAT ACAGTAATCT AGAATAATGA TTGTTCTTTT TCTTTTATAT
CTTTACTGTT CTTGTGTATG TGTGTTTGGG AGATGATTAC AAGCATAGAG AGTAAGGTGG TTTAAGAACA GTTACTTTGT
TATTCACATG GTTATAGTTT ACTAGTTCTC TTGTTATTGA GTAATGGTTT TGGATATGGT TCAGGTACTG GTGCTTGGGA
GAGTGCTCTC ACAAACACAC TGTCTCCTGG GGATAGAATT GTATCATTCC TGATTGGTCA ATTCAGCTTG CTTTGGATCG
ATCAGCAGCA ACGTCTGAAT TTCAATGTTG ATGTTGTGGA AAGTGAATGG GGCCAGGGTG CTAAGCTTGA TGTTCTGGAA
TCAAAGATTG CATCAGACAC TGCACACACT ATAAAGGCAA TTTGCATTGT CCACAATGAG ACAGCAACTG GGGTCACCAA
CAACTTGGCC AAAGTGAGAC AAATTCTCGG TGAGTGTTTC ATCTAATCCA CAATATGTCA GAATTCTAAA ATGTTAGCTT
TTTCATTCTT TTTTTTCTCC TTGAAGTGTT TATCTGGAGA TGTTCATCCA AACAGGTCAT TTGTCTTTGG TCTTTGATGT
TCAAAGATAT TAATGTTCAT GACTGCTCTT GGTTCCATTG AGAACATATT TTGGTTGCCA GTTTTAGCTG TTTGTTTTCT
TTTGTCCTAT AACATCTATT ATACTTTTGA AGGACTACTT AGTTTAGTAT TTTGTCTAAA CACATAACTG CTCTGTACTT
ACTGAATCAC GCATATAACT GCCAAACTGT TTATCTCCAA GTAATAATCA TAGTGAGACA TGTTGCATAG ATTATTAGCA
TTTAACTTGA CTCCGTTGAT CTTGATGGGT TATGTTATAG AAGAGGGTAT TGATTGGGAG ATATTATATA TATATATATA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATGTA GATGACATGA GTTTAACCCA TATATATAAG
GAATCAATAC CACTTTTAAT CTAAGACCTT AAGACAATAA GTTCATGGAT TTTTCATCTA GTGTTTAATT TTGTCTTTTT
TATCCAATGT GAAACTGTGA GTCACACTTG GATTAATCCC AACCGATCTA AGTATGCATC TGAAACTTTA CCAAAGTATT
CACATGCAAC ACCACTAGTG AACTCAAATG CTATGTTGAC ATAAATTCTG TCATTCTTTG ATGAAAATGT GTTCCTAGAC
CTCTTCCAGG TCTGCAAATG TATCAAACAT TTGCATTAAC CAGCTGTTGG ATTTTTAATG TTGTTTTTTC CTTCATGAAA
AGATTCTGAC GTTGTTTCTT TGGACACTCA GATTCCTATA GGCACCCAGC ACTCTTCATT GTTGATGGAG TGTCTTCCAT
TTGTGCACTT GATTTCCGCA TGGACGAATG GGGAGTAGAT GTGGCCATAA CTGGCTCTCA GAAAGCCCTT TCCCTTCCCA
CTGGGATAGG AATTGTGGTT GCAGGACCTA AAGCTATTGA GGCCTCAAAA ACTGCTAAGT CACTCAGAGT TTTCTTTGAC
TGGAAAGACT ACCTGAAATT CTACCAGTTA GGAACCTATT GGCCATACAC TCCTTCCATA CATTTGCTGT ATGGTCTCAG
AGCTGCTCTT GATCTGGTTT TTGAAGAAGG ACTTGAAAAT GTGATTGCAA GGCACAATCG TTTAGGCACA GCAACCAGGT
AAGCCATGAT GGTATGCTAG TCCAAAAATG GTTACAATGA AATTCAATGT ATGTGTTGGT TTATGATTGA TTGATATCAG
TGTTTACTTG AAAAGGTTAC TGGTTTTGAC AAATGATCAA AGGTTTATTT AAGTAGACAA TGGTTTTGGC TTTAGGTTAT
GTATAAGATA ATGTATGTGA TAGGTATTCA ATATGGTGAA TGCAGACTTG CTGTAGAGGC ATGGGGTTTG AAGAATTGCA
CCCAAAATGA AGAGTGGCAC AGTGACACAG TGACTGCTGT TGTTGTTCCT TCTTACATTG ATAGTGCTGA AATAGTTAGA
AGGGCATGGA AGAGATACAA TTTGAGCTTA GGTCTTGGAC TGAACAAAGT TGCTGGGAAG GTTTTCAGAA TTGGGCATCT
TGGCTACTTG AATGAGGTAA TGTTGATTCC CAAAATAATT CTCAAGTCAA ATGAAAAGTA ATCTTTGAAT AATCAATATA
CTTATTTACA AAATTTCATT TGTTAACTAC TCTAAATCAG TATTTAAAGG CTCATGTTAA AAAATATCAT AAGTCTTTTC
TTTTTCTTGA TATTGATTGT TGGATGTATT ACATACAATA TTGCCATCCT AGCTTTGAAG AACTTTCTGT CCAACTTCAA
TCGTTCAAGC TTCAAAACTG TGATAGGGAT AGTGCATAAA GAAACAACAT CAATATATTT ATAGTTTTTT TTTAATATGG
TGTTAACTTT TTCATATATA CTTAACGTGA AACTTAGAAT TACTTAAATT TTGAATTGTT TGAGATACTA AAACTCTTTG
GTAATGTCTA ACATGATTTA TTAAAATAAG AAAAAACATG TTTGCAATAC TCTTAGTTCC AAGTTGCCAA CATTTTTATT
TGTTAATTGT TGTAATATTT TTTCAGTTGC AACTGTTGGG ATGTCTAGCT GGGGTGGAGA TGATACTCCA AGATGTGGGT
TACCCTGTAA AGCTTGGAAG TGGAGTTGCT GCTGCCAGTG CATACTTTAA GAATACTATT CCTCTCATCC CTTCAAGGAT
TTGAGTTACA ACCCATTTCT CTTCTCTTCA CTTCCTTTTC TGCTCTTTCA AAAATTCTGT AAAATATATC ACATTATTAT
CCTCTTTTAC ACTCCTTTCA ACGTCAACAT ACTCTCTACT TTCAACTTTA ATCTATTGTT TCTTTCATTC TCTTGTATAT
CACAAATAAT TGCATCTTCT CA

>Vigan.05G236800.01
GTGAGATTGG TTGTCTTACA AATATATATT ATGTGAATGA TGATAATGAT AAAAATTAGA AGGCAATGAA GGTGCAAGAA
ACTTGGAATA TGGATAACCT TTTGGCTTTT AGAGATGAAG CTAAATTGTT GATATGATGT GCCATTTCAC AGCCAAAACT
GAGAGGTTCC CTCTTCATCC ATTCTCAGCC TCAAGGTTCA AAGTTTCTCC CTCTTATCTT CTACCTGTGA CATGGCCTGG
CCCCACCTTA GCATTTCATT GGTTCACCAT AGCTCTTCAT CATAAAAATT CAATTTTCCC ATTTATACTT TTATATAATA
AGCTTCTAAC AACACCAGAC ACACCTCCTG CTTGCTTCTG CCACATTCCT CAAAAACTCT GTAAAGCTCC TCCTTCCCAC
CTATACTCAC TTCTTCTCAT TCTTTTTTCA TATACATATA TATTATGTTG TGTGTGTGTG TTTAGTTGGC TCTTTCCATT
GGATTTTGGT AAGAATGATT TTAAACTCAT GCTCTGTGTT ATTATCTTTA CTGTAAAATT GGCTTCGAAG TGGAAAAATC
GAGTGGGGTG ATCGGTAATC ACAGTTTTCT TCATGTTTTA ATTTAGTTAC TGGTGTGCAA GTTTCAACTC AAAGCAGGTC
TTTCCTCTTG TTCTGTCCAC CAATATATTC TGCTGTGTTT TCTTCATTAT ACAGTGTGTT TTGTTATAAT CTTGTTCTCA
ATGAATTTTC TGAAAGCAGG ATTCAGTTGT GCATCAGTTC TAATATTTTA AGATGATGAT TTTAGTTTTT CTTATTAATT
GCAGAAAAGG GTGTCTAAAA GATAGACACA GAAAGCATAT TTTGAATGAT AAATGTAAAA GCACAACAAA GCTGTTGATG
AAACAGGATA CTTTTTATTA TTTTTTTCTT ATATTATGGT GCTGTTAAAG GTCATCCATA CAGTTACATA ATGATAAGCA
TTAAACAGTT TCTGTTCTCT CCTTTAAATC AACTTTGTGT AACTTAACTT CTGAACTAGG TTCTTTTAGC AGTTAAACAT
GAATTTCCTG TGTTATTAGT TGGAAAACTC ATTAAGGTTC GTGTTTCTGT CACAAATCTC CTCAAGTAAG GAACAATAAA
ACAGTAAATA GCAGTGCATG CACAAAGTTT ATGATAAAAG ATTCAGAAGG TGGTTAAAGC TGACTTTTTG ATGGATTTTG
TTTAGGGGAC TCTTTGTGTG AAAATTCAAA AGAAGTGGTT GAAATTTGAA GCAAGAGAAG ATGGACTATT TCAATGCACC
AGGAAGAAAC CACCTCTTTG TTCCAGGGCC AGTTAACATC CCTGACCAGA TCATTAGGGC CATGAACAGA AACAATGAGG
ACTACCGCTC TCCAGCTATT CCTGCTCTCA CAAAAACTCT GCTTGAGGAT GTCAAGAAGA TTTTCAAGAC CACTACTGGA
ACCCCATTTC TCATCCCTAC AACTGGTACT GGTGCTTGGG AGAGTGCTCT CACAAACACA CTGTCTCCTG GGGATAGAAT
TGTATCATTC CTGATTGGTC AATTCAGCTT GCTTTGGATC GATCAGCAGC AACGTCTGAA TTTCAATGTT GATGTTGTGG
AAAGTGAATG GGGCCAGGGT GCTAAGCTTG ATGTTCTGGA ATCAAAGATT GCATCAGACA CTGCACACAC TATAAAGGCA
ATTTGCATTG TCCACAATGA GACAGCAACT GGGGTCACCA ACAACTTGGC CAAAGTGAGA CAAATTCTCG ATTCCTATAG
GCACCCAGCA CTCTTCATTG TTGATGGAGT GTCTTCCATT TGTGCACTTG ATTTCCGCAT GGACGAATGG GGAGTAGATG
TGGCCATAAC TGGCTCTCAG AAAGCCCTTT CCCTTCCCAC TGGGATAGGA ATTGTGGTTG CAGGACCTAA AGCTATTGAG
GCCTCAAAAA CTGCTAAGTC ACTCAGAGTT TTCTTTGACT GGAAAGACTA CCTGAAATTC TACCAGTTAG GAACCTATTG
GCCATACACT CCTTCCATAC ATTTGCTGTA TGGTCTCAGA GCTGCTCTTG ATCTGGTTTT TGAAGAAGGA CTTGAAAATG
TGATTGCAAG GCACAATCGT TTAGGCACAG CAACCAGACT TGCTGTAGAG GCATGGGGTT TGAAGAATTG CACCCAAAAT
GAAGAGTGGC ACAGTGACAC AGTGACTGCT GTTGTTGTTC CTTCTTACAT TGATAGTGCT GAAATAGTTA GAAGGGCATG
GAAGAGATAC AATTTGAGCT TAGGTCTTGG ACTGAACAAA GTTGCTGGGA AGGTTTTCAG AATTGGGCAT CTTGGCTACT
TGAATGAGTT GCAACTGTTG GGATGTCTAG CTGGGGTGGA GATGATACTC CAAGATGTGG GTTACCCTGT AAAGCTTGGA
AGTGGAGTTG CTGCTGCCAG TGCATACTTT AAGAATACTA TTCCTCTCAT CCCTTCAAGG ATTTGAGTTA CAACCCATTT
CTCTTCTCTT CACTTCCTTT TCTGCTCTTT CAAAAATTCT GTAAAATATA TCACATTATT ATCCTCTTTT ACACTCCTTT
CAACGTCAAC ATACTCTCTA CTTTCAACTT TAATCTATTG TTTCTTTCAT TCTCTTGTAT ATCACAAATA ATTGCATCTT
CTCA

>Vigan.05G236800.01
ATGGACTATT TCAATGCACC AGGAAGAAAC CACCTCTTTG TTCCAGGGCC AGTTAACATC CCTGACCAGA TCATTAGGGC
CATGAACAGA AACAATGAGG ACTACCGCTC TCCAGCTATT CCTGCTCTCA CAAAAACTCT GCTTGAGGAT GTCAAGAAGA
TTTTCAAGAC CACTACTGGA ACCCCATTTC TCATCCCTAC AACTGGTACT GGTGCTTGGG AGAGTGCTCT CACAAACACA
CTGTCTCCTG GGGATAGAAT TGTATCATTC CTGATTGGTC AATTCAGCTT GCTTTGGATC GATCAGCAGC AACGTCTGAA
TTTCAATGTT GATGTTGTGG AAAGTGAATG GGGCCAGGGT GCTAAGCTTG ATGTTCTGGA ATCAAAGATT GCATCAGACA
CTGCACACAC TATAAAGGCA ATTTGCATTG TCCACAATGA GACAGCAACT GGGGTCACCA ACAACTTGGC CAAAGTGAGA
CAAATTCTCG ATTCCTATAG GCACCCAGCA CTCTTCATTG TTGATGGAGT GTCTTCCATT TGTGCACTTG ATTTCCGCAT
GGACGAATGG GGAGTAGATG TGGCCATAAC TGGCTCTCAG AAAGCCCTTT CCCTTCCCAC TGGGATAGGA ATTGTGGTTG
CAGGACCTAA AGCTATTGAG GCCTCAAAAA CTGCTAAGTC ACTCAGAGTT TTCTTTGACT GGAAAGACTA CCTGAAATTC
TACCAGTTAG GAACCTATTG GCCATACACT CCTTCCATAC ATTTGCTGTA TGGTCTCAGA GCTGCTCTTG ATCTGGTTTT
TGAAGAAGGA CTTGAAAATG TGATTGCAAG GCACAATCGT TTAGGCACAG CAACCAGACT TGCTGTAGAG GCATGGGGTT
TGAAGAATTG CACCCAAAAT GAAGAGTGGC ACAGTGACAC AGTGACTGCT GTTGTTGTTC CTTCTTACAT TGATAGTGCT
GAAATAGTTA GAAGGGCATG GAAGAGATAC AATTTGAGCT TAGGTCTTGG ACTGAACAAA GTTGCTGGGA AGGTTTTCAG
AATTGGGCAT CTTGGCTACT TGAATGAGTT GCAACTGTTG GGATGTCTAG CTGGGGTGGA GATGATACTC CAAGATGTGG
GTTACCCTGT AAAGCTTGGA AGTGGAGTTG CTGCTGCCAG TGCATACTTT AAGAATACTA TTCCTCTCAT CCCTTCAAGG
ATTTGA

>Vigan.05G236800.01
MDYFNAPGRN HLFVPGPVNI PDQIIRAMNR NNEDYRSPAI PALTKTLLED VKKIFKTTTG TPFLIPTTGT GAWESALTNT
LSPGDRIVSF LIGQFSLLWI DQQQRLNFNV DVVESEWGQG AKLDVLESKI ASDTAHTIKA ICIVHNETAT GVTNNLAKVR
QILDSYRHPA LFIVDGVSSI CALDFRMDEW GVDVAITGSQ KALSLPTGIG IVVAGPKAIE ASKTAKSLRV FFDWKDYLKF
YQLGTYWPYT PSIHLLYGLR AALDLVFEEG LENVIARHNR LGTATRLAVE AWGLKNCTQN EEWHSDTVTA VVVPSYIDSA
EIVRRAWKRY NLSLGLGLNK VAGKVFRIGH LGYLNELQLL GCLAGVEMIL QDVGYPVKLG SGVAAASAYF KNTIPLIPSR
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