GBrowse Details

Vigan.05G229700.01

Basic Information:
Name: Vigan.05G229700.01
Multiple alignment
Variant Information
Position: Chr05:26183890..26189695 (- strand)
Length: 5806
Functional Information:
Description: Similar to Uncharacterized protein. [I1LWA7, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:20.92,21.82,6.79,4.92,4.74,4.36,5.98,6.15
Automatic updates:
Name: NM_001358708 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP transcription factor 27 (BZIP27), mRNA.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr05:26183890..26184437 (- strand)
Length: 548
Type: three_prime_UTR
Position: Chr05:26184438..26184518 (- strand)
Length: 81
Type: CDS
Position: Chr05:26188517..26188588 (- strand)
Length: 72
Type: CDS
Position: Chr05:26188687..26189349 (- strand)
Length: 663
Type: CDS
Position: Chr05:26189350..26189695 (- strand)
Length: 346
Type: five_prime_UTR

>Vigan.05G229700.01 class=Sequence position=Chr05:26183890..26189695 (- strand)
GTAAAAGTCT ATTTTTTTTT TATGCTGTCC TTTTGCTGTG TGATCTTGTG TGATGGTTTT TGATTAAGTG GGATTGATCA
TAATTTGTGA ATCATAAAGT TTGAGTCTCG ATGGGTTCTT TGGGTTGAAA TCCCAACTCT TTTGTTGTTA TGGTGTCTTT
CTGGGGACCC CAGATAGGGG GGAGTGTTGG GATTTTGAAA AAGGTTGGAA ATTTGTTTAG GGAAAAGCTT TGGAGTGGTG
TTTTTGATTG GGATGTGAGT GAGTTAGGAT CCAAGTGCAA TGGTTAATGT TTTAGTTATT TATTTTATTG TTGCTTTGTG
GTTACAACTT ACAGGTTTTA GTTTGAATGG GGATTCAGAC AATGGGATCT CAAGGTAATG GGCAACAGTC TCATTTACAG
TCTTCATCTT TGTCTAGGCA AGGTTCATGG TATAATCTTA CTCTTGATGA GGTTAATAGT CAATTAGGAG ACTTAGGGAA
GCCATTGGGT AGCATGAACC TTGACGAGCT TCTTCAAAAT GTGTGGACTG CCGAAGCAAG TAAGTCTTCG GTGATAGGTG
CGGATAGTGA GAACATTTCG TCCTCTTCCT CCCTTCAGCG GCAGGCCAGC CTGACGCTGG CTCGTGCATT GAGTGGGAAG
ACTGTGGATG ACGTGTGGAG GGAAATTCAG CAAGGGCAGA AGAAAAGGTA TGGAGGGGAA GTGAAAACTC AGGAGGGAGA
AATGACTTTT GGTGAGACAA CCTTGGAAGA TTTCTTGGTG CAAGCAGGGC TTTTTGCTGA AGCTTCTATC AGTCCAGCTG
TGGGGTTGGA TACAATGGAT TTCTCAGCAG CTCAAGGTTT CCAGCAGAAA ACGGGCTTGT CTTCATCCCC TTCTATTGGC
AGTTTATCGG ACACGAGACC GGGCAGGAAA AGGGATGCTC CTGATGCATA TGAGAAAACC CTGGAGAGGA GGTTGAGGAG
GAAGATCAAG AATAGGGAAT CTGCTGCTAG GTCACGAGCT CGTAAACAGG TCTAACATGT GCTACAAATT TTGCTTTGGT
GAATTGAATA CATTCTTTTA CATGTTGAAA TTGTTAGTTT CGACAATATC AACCTTTCAT GGTTCAGGCT TACCATAATG
AACTGGTTGG CAAGGTTTCC CGTCTAGAAG AAGAAAATGT AAAGCTAAAG AAAGAGAAGG TAACATACCC AATTCACGTT
TCTTTTTTCA TCCAACGTTC CTCGTATTTG TTGTATAGAT GTTTGTATTT TCTTTTATTA GAAAATCTAT TGAGTTTATT
TGTGATTAAT TGAAAAGTTT AGGATTTGTT GCGTGGATTG AATGTGCTTT GCAACTAAGA GACTATTTGG TAACCTTGTA
CTGGATTTTA TCATCCTTGG GGAAATGGGA ACTTGCAGTT CCCCAATATT TTTCAAAATT CTAATATTTA AATTTTAATT
GAAATGATAT TCGAGATATG AATACATGAT CTTCTGTTCT TTCAGTCAGT GTTGTTAAAT AGTAATTATA ATGCCGCCAC
AACGCTATAG CATGGCGTTT TTCACCCCTT CACCCTAGGC AATCTATGAA GGGAGGCCCA TTGTGGACAA TGGTGTGTTT
ATATGGAAGA ATTTTGGCCG TCTTCCATTG ATAACCTTGC CGTCAGTTAT TTCTGAGTAT TGATGTATCT TCCATTTCAA
TAAATTAGAA TTTGAACCTC CTGAGGTTGA GGGCGAAATG TTACTTTAAT ACCAAGCTGT GAGTTGTTAA CTTTCTTTCA
GAGAAAAAAC AGAAACATGA AATTCTTCAC AGCATTATAA TGTCTGTTAG TAGATCATAC TTAAGTGACT AAGGATCTTA
AATATATACA ATTTATATAA TTACAAAAGT ATAAACCATT GTGTACTGAG TTAAAGAATG GATAATTTTG TCTTGTACTT
ATATGCACAT ACTTTCTTTT TGCTTATAAT ACTTTTGGTA TAATCTCGAA TCACTTCTTC AGTTGTTTGG TATATGTGGG
TAAGAATATC TTGTGCTTTG TTTTATGTTA GCACCTTAAC TTAAATCCAT TTTTAGTATT CTGATTGTGA CTAATTTCAC
TAGAATCTGT GCATGTGTCT TTACCCTTTA CCTGTTGCAG ATAATATTAA TCTAATAGTT GAGCTTACAT GTTCTATTAA
TGATTGTGAA ACCATTATTA CAAAATACTT TATGTAAATG ATTGTGCAAA AAAATTTGGT TGCAATGGAC CCTAAGTTCT
GAGTTGATCT ATGTATTTAA CCTAGTCTAA TTAGATAGGC ATAGTTTTTG TTGAAGATTA ATCTGTATTT TATTCCATCT
TATGTGCTCC ATCAAATCTT TTTCCATTAT GTATGACTTG AATTTGAATG ATAAAAATGA ATTAGTTGTT AATGTATGTA
TATGTATGTA TGTATATATG AAAGAGAGAG ATACATTAAA AGGTAAAGGT ATACCTTATA GCACTTAACC CTTAGGCTGG
GTACATAACA TACACCGAAA ATGCATGTCA TCATCATTGT TGGCAGTGGA GAAGAAGGTG CTAAGTTGGT CCATTGTTGG
GAAATCCTTC AGGTCCAGCA GATTCAGACT TTTGACTTGC AGATTTAGGA TTTTGGTTCA CCTCTATTCT TTCCCTCTCA
GCTTCAGCTT TAGTTATATT ACCCTTTTGA ATTTTTTTTT TCATTTTATG ATCCACAAGA TAAATTTGGG AATATAAAAG
ACTCATCAAC TTTCTCTCTT GAACTCTCTC CCTAAAGATG AGGATGGTTA AAATAGTTAA GTTACTCATT AAAGGTGACA
TCCCTTGATG CAAATTTTTG AAAGGAGGAT GAAAGAACTT ATAACCTTTT TGTGTGATAG TGTACCCTAC GAAAACACAT
TTAACAGAGT TTGCGTCTGG TTTTTATTCC CCTTTGCTGT TTATGAATGT ACAAATGAGA CATACCCAAA TATTGTAGGT
TGAAGGCTAA GTGTATGAGT TATATGTGGA TAGAATGAGT GGAGAACTTC CATTGGACTT TTTAATGACA AAACTGGAGA
AGGTAAATGT TAATTAAATA ATTGGAAGTA GGTATGGATT CTCACCAAAA TTCTTATGGA ATGTTATTTT GAAAAAGGAG
TGCTCTAGTT TGTTCTAGTA AGTGTCCATT TTTTCGTTTA GCAATTCCAT TTTGTTGGGG TGTGTAAACA CATGAGGATT
CATGGATTAT CCCTTCTTTT TGAAAAAGAA GAATTTGAGG TATGATTGAA ATCAACCCTA AGTTGCTTGA TAGTAACCCA
AAGTAATTTT TTATCACTGG CACAAACTGG ATAACGTTAG AGATAACCTT AGATTTGTTT TTAAGGAGAA AATGCCATGT
TACCCTTGTA CAGTCATCAA TAAAGGTGAT AACCATTTAG CCCCCTGAAA TATTATGAAC ATTAGAGCAA CACCACACAT
CTGTATGAAC AAGATGAAAA GGAGAAGTAC TGATTATATT GTATTACAAG TGAAGGATAC TCCTACTAAA GAATTTCCCT
AGAAGCCATA AACTTTTGCC AGACACATTC ACTAACAGGG GGACATTAAA GGTTTTTCTG AACATGCAAG ACATTTGCAG
GGGTGTTGTA TTGGGAAGGC ATGAAGAGAA TATCAGGGAT TACGTGGTGG AATGTGAAAT TTGCCAGGAA AAGCATGAAT
CACTAACTCC AGAAGGGCTT TTACAACTCT TACCTCTCCC AACCCAAGGT GGACCGATAA TGGTTGTTGT GAATAGGCTG
ACCAGATTCT TCTTACATCT CATAGTATTG AGTCATCCTA TACAGCTAGC GAAGTGGATA CTGTTTTCTC AAAGAAATAG
TTCGACTGCA TGGTTTCCTT GCCTCTTTAG TTGTAGACAG GGATCAAGTT TTCTTAAGCA GATTCTGGAA GGAGTTGTTT
AAGGAGCAGG AAGACAGCTG AAATATAGCT CAGCTTTTCA TTCTCAAACT GATGTGTTAA CTAAAGTAGT TTACCATTGT
CTGGAGACCT ATATGAAATG TTTGACAGGA ACTAAGCCAA AGCAATAGCC ATAATGGTTT TTGGGCAGAT TTTTTGGTAA
TACAAATTAC GGTGCCTCTT CCAAGATGAC TCCCTCCAAG GCCTTATGAT CATGAATGGG GAACAAATGT TGGAGGTTCA
GCCAGAGTTG GTGTTGAACC TTAGGGAAGG TTCACGAGTA GAATTGGAAG TGTGCTGATA AAGTGCAAGT AGCTCTCAGA
GTGTGAGAAC AGTTGGGAAT CACATCCAGA ATCCCAGAAG CATTTCCAGA ATTTCACCTT AAGGGCAAGG ACTTTTAGGG
AGGTGGGGGG GCGGGATTGA TAAGGGTCCC TGGCCCAAAA TATATAAGGT GTATGGAAAA GAGAAAAATA AAAAAAGATG
CAGGGAATCA TAACCCTGAT ATAGATAGTT TGAACAACAT TATGAATTGG GCATCAGAAG CGAGAGGGGA CCATTTTTTG
TGGAGTATTC AAGGAACCGA GCTGGGGGAG GGTGCAGGGC TCTCAAAATC CCTGTAAAGG TAGTTTTCCT TTATTATTTT
CCCAATCTTA TGCTACTGCC AAATTGGTCA GTAGGATTAG GAATCAATTC TCAATATATA TATACCTTGT TTCCATTTTT
AATTCTTCAG TTTTGGTCGG GTGCCTATCA GAATAACAGT AATGAAATTT AATTGACATT TCGGCATTAT GTTAGTTATG
GACACCGCAA TATTCATGTG TTCATTATTG CTGCTTAATA TTCCCATTTT TTCTTTGGAG AAAGTTACTC AAATTTTAAT
ATTTCAGGCC ATTTTTCTCT CTCACACTAA CAATCTTTGC ACTATGGATG ATGGTTTTGT ACAGATTCAT GCCACCCCTA
CCTTTGGTTG TAACTCCTTT GCGTTTCCAT TAACTTCTGG CTGTCAAAAT ATCCCTTTGT TTCTCAAAGA AATTTAGTTT
TCTTTTACAA TTTCATCTTA CTGATTTATA GCTGTTTGTT ATTATTGATT TTGTGCCAAG AACATTGTAT ACTATTCCAA
GCCTGATGAT TATTGATGCA TTATTTTATT ATTTCAAATT AGAAATCTAC CATTCTCCGT CAATTATTAG TCGATAATTT
CAATATTTTT GCTACAATAT GAATCTGATT TCATATTTTG GACTTCCCCT TTAATAGGAA TTTGAAGAAA GGTTTACTCC
CGATCCATTG CCTGAACCAA AATATCAACT TCAAAGACAT AACTCTGCCC CTTTCTGACA TCTGCAATGG AGTTTTCTGG
CTATTCATGT TCTTGATTTG ATGAGGACAT GTCCAGGACT ATATCACTGC AATGCTCATT GCTGTTGCCA CTGCTTTGCA
TTTTCTCTGG CAGAGGACGG TTTGCTCTAT ATCTACAATT AGCTAACTAT AGGGGTACAT ACGCAGCAAA GGTTTGATGT
TCATAAGCTT TAGCTTTGGT TGGAAACGGT ATCAGGAAAT ATTGGAAGCC AATGGAAACC TGAAAGTTAG TTACCTTTTT
GTATAATGGT TATATGTGTG TATTAGGGCA ATTGTTAAGC AGTTAAGTTA TTGAAAGGTG ACTAGAAAAA AGCTGAAACT
AGGTAAGGTA GGTATTGTTA GCAGTTCTGA ACTGCAATAT TGTATTAGAT TAAATTGATA TTTGTCTACA AGTTTTTAAG
GGATATCAAG TTATGAGAAT TAGTATGCTC TGTAGAGATA GTTTTCCAGA AAAGATGAAA TAACAAAAGA AACGTTTGTT
TATTATGTTT TCTAGTGCAG TTTGCCACCA TGAACATGTG TTTTAT

>Vigan.05G229700.01
GTAAAAGTCT ATTTTTTTTT TATGCTGTCC TTTTGCTGTG TGATCTTGTG TGATGGTTTT TGATTAAGTG GGATTGATCA
TAATTTGTGA ATCATAAAGT TTGAGTCTCG ATGGGTTCTT TGGGTTGAAA TCCCAACTCT TTTGTTGTTA TGGTGTCTTT
CTGGGGACCC CAGATAGGGG GGAGTGTTGG GATTTTGAAA AAGGTTGGAA ATTTGTTTAG GGAAAAGCTT TGGAGTGGTG
TTTTTGATTG GGATGTGAGT GAGTTAGGAT CCAAGTGCAA TGGTTAATGT TTTAGTTATT TATTTTATTG TTGCTTTGTG
GTTACAACTT ACAGGTTTTA GTTTGAATGG GGATTCAGAC AATGGGATCT CAAGGTAATG GGCAACAGTC TCATTTACAG
TCTTCATCTT TGTCTAGGCA AGGTTCATGG TATAATCTTA CTCTTGATGA GGTTAATAGT CAATTAGGAG ACTTAGGGAA
GCCATTGGGT AGCATGAACC TTGACGAGCT TCTTCAAAAT GTGTGGACTG CCGAAGCAAG TAAGTCTTCG GTGATAGGTG
CGGATAGTGA GAACATTTCG TCCTCTTCCT CCCTTCAGCG GCAGGCCAGC CTGACGCTGG CTCGTGCATT GAGTGGGAAG
ACTGTGGATG ACGTGTGGAG GGAAATTCAG CAAGGGCAGA AGAAAAGGTA TGGAGGGGAA GTGAAAACTC AGGAGGGAGA
AATGACTTTT GGTGAGACAA CCTTGGAAGA TTTCTTGGTG CAAGCAGGGC TTTTTGCTGA AGCTTCTATC AGTCCAGCTG
TGGGGTTGGA TACAATGGAT TTCTCAGCAG CTCAAGGTTT CCAGCAGAAA ACGGGCTTGT CTTCATCCCC TTCTATTGGC
AGTTTATCGG ACACGAGACC GGGCAGGAAA AGGGATGCTC CTGATGCATA TGAGAAAACC CTGGAGAGGA GGTTGAGGAG
GAAGATCAAG AATAGGGAAT CTGCTGCTAG GTCACGAGCT CGTAAACAGG CTTACCATAA TGAACTGGTT GGCAAGGTTT
CCCGTCTAGA AGAAGAAAAT GTAAAGCTAA AGAAAGAGAA GGAATTTGAA GAAAGGTTTA CTCCCGATCC ATTGCCTGAA
CCAAAATATC AACTTCAAAG ACATAACTCT GCCCCTTTCT GACATCTGCA ATGGAGTTTT CTGGCTATTC ATGTTCTTGA
TTTGATGAGG ACATGTCCAG GACTATATCA CTGCAATGCT CATTGCTGTT GCCACTGCTT TGCATTTTCT CTGGCAGAGG
ACGGTTTGCT CTATATCTAC AATTAGCTAA CTATAGGGGT ACATACGCAG CAAAGGTTTG ATGTTCATAA GCTTTAGCTT
TGGTTGGAAA CGGTATCAGG AAATATTGGA AGCCAATGGA AACCTGAAAG TTAGTTACCT TTTTGTATAA TGGTTATATG
TGTGTATTAG GGCAATTGTT AAGCAGTTAA GTTATTGAAA GGTGACTAGA AAAAAGCTGA AACTAGGTAA GGTAGGTATT
GTTAGCAGTT CTGAACTGCA ATATTGTATT AGATTAAATT GATATTTGTC TACAAGTTTT TAAGGGATAT CAAGTTATGA
GAATTAGTAT GCTCTGTAGA GATAGTTTTC CAGAAAAGAT GAAATAACAA AAGAAACGTT TGTTTATTAT GTTTTCTAGT
GCAGTTTGCC ACCATGAACA TGTGTTTTAT 

>Vigan.05G229700.01
ATGGGGATTC AGACAATGGG ATCTCAAGGT AATGGGCAAC AGTCTCATTT ACAGTCTTCA TCTTTGTCTA GGCAAGGTTC
ATGGTATAAT CTTACTCTTG ATGAGGTTAA TAGTCAATTA GGAGACTTAG GGAAGCCATT GGGTAGCATG AACCTTGACG
AGCTTCTTCA AAATGTGTGG ACTGCCGAAG CAAGTAAGTC TTCGGTGATA GGTGCGGATA GTGAGAACAT TTCGTCCTCT
TCCTCCCTTC AGCGGCAGGC CAGCCTGACG CTGGCTCGTG CATTGAGTGG GAAGACTGTG GATGACGTGT GGAGGGAAAT
TCAGCAAGGG CAGAAGAAAA GGTATGGAGG GGAAGTGAAA ACTCAGGAGG GAGAAATGAC TTTTGGTGAG ACAACCTTGG
AAGATTTCTT GGTGCAAGCA GGGCTTTTTG CTGAAGCTTC TATCAGTCCA GCTGTGGGGT TGGATACAAT GGATTTCTCA
GCAGCTCAAG GTTTCCAGCA GAAAACGGGC TTGTCTTCAT CCCCTTCTAT TGGCAGTTTA TCGGACACGA GACCGGGCAG
GAAAAGGGAT GCTCCTGATG CATATGAGAA AACCCTGGAG AGGAGGTTGA GGAGGAAGAT CAAGAATAGG GAATCTGCTG
CTAGGTCACG AGCTCGTAAA CAGGCTTACC ATAATGAACT GGTTGGCAAG GTTTCCCGTC TAGAAGAAGA AAATGTAAAG
CTAAAGAAAG AGAAGGAATT TGAAGAAAGG TTTACTCCCG ATCCATTGCC TGAACCAAAA TATCAACTTC AAAGACATAA
CTCTGCCCCT TTCTGA

>Vigan.05G229700.01
MGIQTMGSQG NGQQSHLQSS SLSRQGSWYN LTLDEVNSQL GDLGKPLGSM NLDELLQNVW TAEASKSSVI GADSENISSS
SSLQRQASLT LARALSGKTV DDVWREIQQG QKKRYGGEVK TQEGEMTFGE TTLEDFLVQA GLFAEASISP AVGLDTMDFS
AAQGFQQKTG LSSSPSIGSL SDTRPGRKRD APDAYEKTLE RRLRRKIKNR ESAARSRARK QAYHNELVGK VSRLEEENVK
LKKEKEFEER FTPDPLPEPK YQLQRHNSAP F*