GBrowse Details

Vigan.05G132700.01

Basic Information:
Name: Vigan.05G132700.01
Multiple alignment
Variant Information
Position: Chr05:10742348..10748057 (- strand)
Length: 5710
Functional Information:
Description: Similar to Uncharacterized protein. [I1JRU3, Glycine max]
GO: Biological Process: lipid metabolic process (GO:0006629)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)
InterPro: Lipase, GDSL (IPR001087)
SGNH hydrolase-type esterase domain (IPR013831)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.48,10.11,25.11,7.16,0.08,10.30,0.06,11.09
Arabidopsis thaliana homolog: AT3G04290.1, AT4G28780.1, AT5G33370.1
Automatic updates:
Name: NM_001354877 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max GDSL esterase/lipase LTL1 (LOC100812344), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:10742348..10742673 (- strand)
Length: 326
Type: three_prime_UTR
Position: Chr05:10742674..10742906 (- strand)
Length: 233
Type: CDS
Position: Chr05:10744362..10744614 (- strand)
Length: 253
Type: CDS
Position: Chr05:10746952..10747194 (- strand)
Length: 243
Type: CDS
Position: Chr05:10747376..10747503 (- strand)
Length: 128
Type: CDS
Position: Chr05:10747646..10747898 (- strand)
Length: 253
Type: CDS
Position: Chr05:10747899..10748057 (- strand)
Length: 159
Type: five_prime_UTR

>Vigan.05G132700.01 class=Sequence position=Chr05:10742348..10748057 (- strand)
GCCTCTCTTT ATTACGAGCG TTATCTCCAT CTGCTTGTGG TAGCAGAAGC TATTTAATTC ACCACATCAA ATATCACAGC
CACTGACCTC TATATAAACC TACCCCTCAA CTTATTACCT TCTTCATACC GAGTTCAGTG TTGTTATTTA CCATTACAAA
TGGACCAAAG GGTTTTTGAT TCTTCTATGT TTCTATGTTT GCTTGTGTTA ATCACATGTA ACAACGTTGT TCTTGTTCCA
CAAGCCGAGG CTCGAGCGTT TTTTGTTTTT GGAGATTCGT TGGTTGATAA TGGCAACAAT AACTACCTAC TCACCACTGC
TCGTGCCGAC GCATACCCTT ATGGCATTGA CTATCCAACT CACAGGGCAA CCGGTCGATT CTCCAACGGC CTCAATATCC
CGGACATTAT CAGTTGGGTC CCTAATCATG TCGCTGTTCT GATTAATTCT TTCAGTAGCT TTCAACTCCA TGTTTTTTTG
TTCTGTTATG TTCTAAAACT CTTAATTACT GCTTAATTAA TATGCTAATG ATGAGAAGTG TGTGATGCAA ATAGGTGAAC
AAATTGGGTC AGAACCCACG TTGCCGTATC TGAATCCTGC GCTGGATGGA GAGAGGCTAC TCGTCGGGGC AAATTTTGCT
TCTGCTGGAA TAGGAATTCT CAATGACACT GGAATCCAGT TTGTAAGCCA ACATTTTTGC TTTTTCTCTC GTTCATTTCA
ACCGATTTTT TACTACGTTG AATCATGTAT GAATCTATGT TAATAATCAT TAATGAATCA TCCTTTTTAT TATCCATAAA
AGTGTGTACA AACATTTACA TATGAATGGG GCATTAATTG AAAATGGTAT ATATATATTG CAGATAAACA TAATCCGAAT
CAGCAGACAA TTACAGTACT TTGAACAGTA TCAACAGAGG GTGAGTGCAC TAATTGGAGT AGAACAGGCT CAAAGACTTG
TGAACCAGGC ACTGGTCCTC ATAACATTAG GAGGCAATGA TTTTGTTAAC AACTATTTCC TCGTGCCATT TTCTGCAAGA
TCACGTCAAT TTGCACTCCC AGACTATGTC GTCTACCTTA TTTCCGAATA TCGCAAAATT CTTGTGGTAT ATATTCTCTT
CTGTTGCTCT TCTTTTAGTA TTATATTATA TTATTATTAT ACTATTATCC CTTTATAATT TCGGTCACTA ATTAACACCT
ATCAAAGTTA TGTTTGACTT GCATATTATC ATCATATACA CAACTTCGAT GAACCTAGGA TCCAATAGTT CACCACTTTA
GGCAAGGAAT ACTTTGATGG GGACAAGTCA TGCTCATTTT TCATATAATT ATTATTTTTC CAACTATTTG CTATTTAATA
TACCATCTTC AAGAAGTTGC CTTTTAGGTT TGCACTCGAT ATATGTTCCC ACACCTACAA TTTAACATTT TAAACTTAAA
ACTAAATATA TTTTTTTTTC AACCTCCAGT TTGAAAAATG AAATTTACAC TTTCATTTAT ATATTATAGG ATAATGTTAC
TTTGACAACA TTTTTTTGAC AACATTTTAA CATCATCTAC ATGTCATCCT GTGATTGGTC CAAAATTACT TCACAATCAA
TAATAAATAT TCATAAACAC ACGTAGATGA TGTTAAAATG TTGTCAAAAA AATGTTGTCA AAGTGTCATT ATCCTATATT
ATATTATGAT TACATCATGA ATGTCACCTA TTCAAAATGT TTTCCCGCTT TAAATCTTAT AATTTTCTCT CAAAGAAGAG
AGCACAAGTT AGAGTGTGTT TTCTTTATTT TTTTCTTTAG TTTTTTTCCT AATAATTATA AAGAAAAATT GTATTATCTT
AATTTTAGTA TTTGCAAATA AAATAATTCA TTTTCAATTG TGATTTTATG ACTATAAACG GCTATAAAAA ATAACAAGAA
CATAATTTTC TTACAGATAT GTTAATTGAA TTTGAACAAC GTTAAACCCT TATATAGTCT TTGTAGTAGT TTTTCTTTTC
ATTTGCGAGC ACTTTGATGT GTTTTCGCTC CTTTCTCTCT TATATCGTCT TCTTAAGGAT TTTTCATTTA TTTATATGTT
CATCTTAAGG AAGCGTTTTG TTTTAATTTT TTAGATAATA AAGTAATTTA AAAAGTAAGG TTTATAGAGT ATTTTTTTTA
AAAAATCGTG GCCATCGTTG ATTTTTGAGA AAGTGACATT TTCAGGTTTT ATTTTATTTT TATTCATTCA GTGAGAGTGA
TTGTTACTTT ATGATAATAA TATATAGGAA GGATTCCCAT GATAAAAGTG ACAATAATCT CTCATTTCCA ATACTTAATT
AGCACATCTC TTTAGTTATA TTATTTAAAT TTTAATGAAA ATGCCTTTTC AGAATACAGT GTTTGAAAGT GTAAAAGTTT
ACTATGCTTT AAAACCATCA CACCTAAAAG ATATCTGTTA GCATTCATTT GTAGTACTAG TATAATAACG TCTGTTGCTC
TTGGGTAAAT ACAATACATG TTAATTAATT GTGTCTCAGA AAAACAATAA TACAGACATA AATTGGACAA GGACAACACC
TTCTGTCAAA GATGCATAAT GTCAAAGTAT AGTAAATGAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT
ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATAATAGA CTTAACTTCT GGAAAACTTT ACTCAGTAAT
TAATGTGTTA GAAGTTTCAT ATATCAATTA GAAAAAAAGA TTAATTCACA TTATACAAAC TTCATTTTAA AAGTTAATTT
TGTAAGATTT AGTATCAAAA TCATGAATTG AGTTTATCTC ATCGAGATTT ATTATATGTT TGAAGTATCA TATCAAGAAT
TTATTGTTTC TTAGATCTAT ATTGTGTCAT CTGTTTGGTG GAAACTTAAT AGTATGAAAT GAATAATTTG ATGATGCATG
TTGGGTTGTG TGAAACAATA AGTTAGAGTT ATGATATGGT ATGAGGGGTT ACCGAAGCCA TTGACCATTG AATCATTCTA
CCGATTTATA AACATTGATG TAAGAAGCAT GTGGGGTAGC GTACTATAAA TGTAGAGTTA ATGTGTCATA ACTCGTGAAT
CTGTGCACCT AGTGTTTTTG AAGTATAGGC ATATGGGCAG TGTTCAGCAG CAATAGATAA AAAAATAAAT GATAGTTTTA
GTGGTGGTAG AGTTAAAGAG TGAACTTTAA ATTTAACTTG ATTTCATAAA ATCGATATAA AATCGATTTG TAAAATGAAG
TTTATTTTCG TTTATATATT ATAAATTGGT TTTATATCCG TCATGGCAAA CATGGATGGT TAGCGTAATA AAGAGTGTTT
GTGGTTTTAT ATATGATCCA TGTGAGACTT TCGAACATTG ATGGTTAGCA TAATAAAGAG TGTTTGTGTG ATGCATGATG
TAGAGGCTTT ATGAATTGGG AGCAAGACGA GTTTTGGTGA CAGGAACGGG GCCATTAGGG TGCGTACCTG CAGAATTAGC
ACAGCATAGC AGAAATGGGG AGTGTGCAGC AGATCTGCAA CAAGCTTCTG CATTGTTCAA CCCGCAACTC GTACAGTTGG
TGAATCAACT TAACTCTGAA ATTGGTTCGG CTATCTTCAT TTCGGCTAAT GCCTTCCAAT CCAATATGGA TTTTATCAGT
AACCCACAGG CCTACGGTAC GTACAAACAC TTACTCTTTC TATCTCATCA ATTATATATA TTTCGATATT GATTATCAAC
TGGGTCGCTA ATAGATGAGA CCCACATGAA GTCTCTTGTT TTAGAACAAA TTCGTTAAAA CTTTAAAATT GAGAATAATA
ATAATAATAA TAAAGACACA CTAGTCTTTT GTGTTAGACC ATCACGGTTG CAAGAATTGT TTTTTAATAT TTTAGTTTAC
TTTTTTTTAT TCCTGTAAAC CACTTTTAAG GCCTTTCCAT TCAACTTCTA CTTAATGTTT TATTTGATAG ATTAACTTTT
TATTCTTATA ATTTAATATT TCATGTCAGT GTATTTCAAT AAAGCGATCT TATAAGATAT TGAGGATAAT TTTATGATTT
TATGTATGAC TCTACATTAG AGATATTCTT ATCCCAATAT TTAAGTTTTA AATTTGAATT TAAGTTTCCT TTCAAAAAAT
GTAAAAGTAA AATATAAAGT AATTGACAAA TGAGAAACTA TATAGCTCCC GAGAGAGAAA AAAAATAGAT ATTAGAAATA
TTTTCGTTAG TAGTTAATAC TTAAGTTTAA ATGAAAACAT TAATTAACAT TGCCATTTTA TTCTATAACT CAAGGATTCA
TGGTACGTAA TATAGTTTTA GTTTAATCAA TATTAACCAT GCTTGCTTAT AATTTTTTTA AAATTAATTC TAACGTATGA
TTATTGTAAA ATGTTTATGT AATGCCACAT CATTATTTTT CAAAAAAGAA ATAAAGCTAT GGAGCACTTG CTAAAGGAGT
CAAACTTTTT CCACTCAACT GTATATAAGA AAATATCAAA AGTTAAACTA ATATTGGTGG TATACTAACT ATATATGTTT
GAAAAGCTAC AAATGTAGTC AAAATTAGTT CTGATTTCAC CTATTATAGA TTAATTTTAA ACGACAGTTG AAATTCATAG
AAAAAATATG TATGTTTACG AAAAAAAATC AAATTTAATA TTATGCTAAT ATATTGTACA GTTACAATTT TTTTTCTTTA
AAAAAATAAG TCTTATACGA AACGAAAAGG TATTTATTTA TAACCATAAA CTCTTTAAAT AATGACCATT GGATCAAAAA
CTGCATACCA TGCAGTTATT CGTTGGGACC CAAATTAGAT GACTCTTGAA GTGCTCTGAC CCCTGACTCT TTGGAGAAAA
GCAAACCAGC CATTTTGTTT TAGGAAAGGA CCATGATATT AACAACTTTT TAACAAAATG TTCATGTGAT AACATGTGAT
TGATCGAATA AAATTACTTA ATAATAATAA CAATAATATT AAAGGAGTGT GCTATTTTTC TGATCATAGC ACCATGCAAA
AACTTAAAGG AGTACGGTCC ATGAAGAAGT AACTCAGACA ACAATTATAA AACGTAAAAT CATTGTTTCA TTTTGACATA
ATAACTTAAA AGCATGAATG TTGAAATGCA GGTTTTATCA CCTCAAAAGT TGCATGCTGT GGGCAAGGAC GTTTCAATGG
GATTGGACTG TGTACACCAG TGTCTAACCT GTGTCCAAAC AGGAATGTGT ATGCATTTTG GGATCCCTTC CATCCAAGTG
AGAGAGCAAA CAGATTAATC GTGGAAACAT TCATGATTGG AGACTCCAAA TACATGAACC CAATGAATCT CAGTACCATT
ATGCAGTTGG ATTCAAGGAC CTGATTATCA TCATCTTCTT CTTCTTCCTA GGATTGTCAC ACACATTCTG CATTACATTT
TGTGCTTATA TATATATATT TGATTGTTTA AGCTGTATTG TTACAAATTA TTTGATGCCA TGGGATTGGT ACGTTTTCTC
TCTGCAAGGC CTGATTTGAG AGGAGAAATA GGAGAAGGGT TTGTATCTTG TTGCCCATTT ATGGTTTTGG GTTGAGATAA
TTTGTGGTTA GAGGTAAGCC CAAAACATAT ATGGGCTTCA AACTTATAGT GTATAATAAA CTTAGGTATC TATAATGTAT
TACCACTTCA AAAAACTATT CCATGCAGAC 

>Vigan.05G132700.01
GCCTCTCTTT ATTACGAGCG TTATCTCCAT CTGCTTGTGG TAGCAGAAGC TATTTAATTC ACCACATCAA ATATCACAGC
CACTGACCTC TATATAAACC TACCCCTCAA CTTATTACCT TCTTCATACC GAGTTCAGTG TTGTTATTTA CCATTACAAA
TGGACCAAAG GGTTTTTGAT TCTTCTATGT TTCTATGTTT GCTTGTGTTA ATCACATGTA ACAACGTTGT TCTTGTTCCA
CAAGCCGAGG CTCGAGCGTT TTTTGTTTTT GGAGATTCGT TGGTTGATAA TGGCAACAAT AACTACCTAC TCACCACTGC
TCGTGCCGAC GCATACCCTT ATGGCATTGA CTATCCAACT CACAGGGCAA CCGGTCGATT CTCCAACGGC CTCAATATCC
CGGACATTAT CAGTGAACAA ATTGGGTCAG AACCCACGTT GCCGTATCTG AATCCTGCGC TGGATGGAGA GAGGCTACTC
GTCGGGGCAA ATTTTGCTTC TGCTGGAATA GGAATTCTCA ATGACACTGG AATCCAGTTT ATAAACATAA TCCGAATCAG
CAGACAATTA CAGTACTTTG AACAGTATCA ACAGAGGGTG AGTGCACTAA TTGGAGTAGA ACAGGCTCAA AGACTTGTGA
ACCAGGCACT GGTCCTCATA ACATTAGGAG GCAATGATTT TGTTAACAAC TATTTCCTCG TGCCATTTTC TGCAAGATCA
CGTCAATTTG CACTCCCAGA CTATGTCGTC TACCTTATTT CCGAATATCG CAAAATTCTT GTGAGGCTTT ATGAATTGGG
AGCAAGACGA GTTTTGGTGA CAGGAACGGG GCCATTAGGG TGCGTACCTG CAGAATTAGC ACAGCATAGC AGAAATGGGG
AGTGTGCAGC AGATCTGCAA CAAGCTTCTG CATTGTTCAA CCCGCAACTC GTACAGTTGG TGAATCAACT TAACTCTGAA
ATTGGTTCGG CTATCTTCAT TTCGGCTAAT GCCTTCCAAT CCAATATGGA TTTTATCAGT AACCCACAGG CCTACGGTTT
TATCACCTCA AAAGTTGCAT GCTGTGGGCA AGGACGTTTC AATGGGATTG GACTGTGTAC ACCAGTGTCT AACCTGTGTC
CAAACAGGAA TGTGTATGCA TTTTGGGATC CCTTCCATCC AAGTGAGAGA GCAAACAGAT TAATCGTGGA AACATTCATG
ATTGGAGACT CCAAATACAT GAACCCAATG AATCTCAGTA CCATTATGCA GTTGGATTCA AGGACCTGAT TATCATCATC
TTCTTCTTCT TCCTAGGATT GTCACACACA TTCTGCATTA CATTTTGTGC TTATATATAT ATATTTGATT GTTTAAGCTG
TATTGTTACA AATTATTTGA TGCCATGGGA TTGGTACGTT TTCTCTCTGC AAGGCCTGAT TTGAGAGGAG AAATAGGAGA
AGGGTTTGTA TCTTGTTGCC CATTTATGGT TTTGGGTTGA GATAATTTGT GGTTAGAGGT AAGCCCAAAA CATATATGGG
CTTCAAACTT ATAGTGTATA ATAAACTTAG GTATCTATAA TGTATTACCA CTTCAAAAAA CTATTCCATG CAGAC

>Vigan.05G132700.01
ATGGACCAAA GGGTTTTTGA TTCTTCTATG TTTCTATGTT TGCTTGTGTT AATCACATGT AACAACGTTG TTCTTGTTCC
ACAAGCCGAG GCTCGAGCGT TTTTTGTTTT TGGAGATTCG TTGGTTGATA ATGGCAACAA TAACTACCTA CTCACCACTG
CTCGTGCCGA CGCATACCCT TATGGCATTG ACTATCCAAC TCACAGGGCA ACCGGTCGAT TCTCCAACGG CCTCAATATC
CCGGACATTA TCAGTGAACA AATTGGGTCA GAACCCACGT TGCCGTATCT GAATCCTGCG CTGGATGGAG AGAGGCTACT
CGTCGGGGCA AATTTTGCTT CTGCTGGAAT AGGAATTCTC AATGACACTG GAATCCAGTT TATAAACATA ATCCGAATCA
GCAGACAATT ACAGTACTTT GAACAGTATC AACAGAGGGT GAGTGCACTA ATTGGAGTAG AACAGGCTCA AAGACTTGTG
AACCAGGCAC TGGTCCTCAT AACATTAGGA GGCAATGATT TTGTTAACAA CTATTTCCTC GTGCCATTTT CTGCAAGATC
ACGTCAATTT GCACTCCCAG ACTATGTCGT CTACCTTATT TCCGAATATC GCAAAATTCT TGTGAGGCTT TATGAATTGG
GAGCAAGACG AGTTTTGGTG ACAGGAACGG GGCCATTAGG GTGCGTACCT GCAGAATTAG CACAGCATAG CAGAAATGGG
GAGTGTGCAG CAGATCTGCA ACAAGCTTCT GCATTGTTCA ACCCGCAACT CGTACAGTTG GTGAATCAAC TTAACTCTGA
AATTGGTTCG GCTATCTTCA TTTCGGCTAA TGCCTTCCAA TCCAATATGG ATTTTATCAG TAACCCACAG GCCTACGGTT
TTATCACCTC AAAAGTTGCA TGCTGTGGGC AAGGACGTTT CAATGGGATT GGACTGTGTA CACCAGTGTC TAACCTGTGT
CCAAACAGGA ATGTGTATGC ATTTTGGGAT CCCTTCCATC CAAGTGAGAG AGCAAACAGA TTAATCGTGG AAACATTCAT
GATTGGAGAC TCCAAATACA TGAACCCAAT GAATCTCAGT ACCATTATGC AGTTGGATTC AAGGACCTGA 

>Vigan.05G132700.01
MDQRVFDSSM FLCLLVLITC NNVVLVPQAE ARAFFVFGDS LVDNGNNNYL LTTARADAYP YGIDYPTHRA TGRFSNGLNI
PDIISEQIGS EPTLPYLNPA LDGERLLVGA NFASAGIGIL NDTGIQFINI IRISRQLQYF EQYQQRVSAL IGVEQAQRLV
NQALVLITLG GNDFVNNYFL VPFSARSRQF ALPDYVVYLI SEYRKILVRL YELGARRVLV TGTGPLGCVP AELAQHSRNG
ECAADLQQAS ALFNPQLVQL VNQLNSEIGS AIFISANAFQ SNMDFISNPQ AYGFITSKVA CCGQGRFNGI GLCTPVSNLC
PNRNVYAFWD PFHPSERANR LIVETFMIGD SKYMNPMNLS TIMQLDSRT*