GBrowse Details

Vigan.05G083900.01

Basic Information:
Name: Vigan.05G083900.01
Multiple alignment
Variant Information
Position: Chr05:6401851..6405076 (+ strand)
Length: 3226
Functional Information:
Description: Similar to Uncharacterized protein. [I1MFI0, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Biological Process: sulfate reduction (GO:0019419)
Biological Process: cell redox homeostasis (GO:0045454)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671)
InterPro: Phosphoadenosine phosphosulphate reductase (IPR002500)
Thioredoxin-independent 5'-adenylylsulphate reductase (IPR004508)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Rossmann-like alpha/beta/alpha sandwich fold (IPR014729)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.65,36.65,25.67,264.19,78.89,127.97,168.76,149.36
Arabidopsis thaliana homolog: AT1G62180.1, AT4G04610.1, AT4G21990.1
Automatic updates:
Name: NM_001248683 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max adenosine 5'-phosphosulfate reductase (LOC547630), mRNA.
PubMed ID: 17761201 NCBI(pubmed)
16684499 NCBI(pubmed)
Status: Known Variant
Name: NM_001360414 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 5'-adenylylsulfate reductase 3, chloroplastic (LOC100799978), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:6401851..6402087 (+ strand)
Length: 237
Type: five_prime_UTR
Position: Chr05:6402088..6402178 (+ strand)
Length: 91
Type: CDS
Position: Chr05:6402309..6402464 (+ strand)
Length: 156
Type: CDS
Position: Chr05:6402597..6402717 (+ strand)
Length: 121
Type: CDS
Position: Chr05:6403287..6404094 (+ strand)
Length: 808
Type: CDS
Position: Chr05:6404203..6404433 (+ strand)
Length: 231
Type: CDS
Position: Chr05:6404434..6405076 (+ strand)
Length: 643
Type: three_prime_UTR

>Vigan.05G083900.01 class=Sequence position=Chr05:6401851..6405076 (+ strand)
GGAAGATAAT GAATATTTAG AAGTGATATG TGAGTCCAAC TTGACCGCGC GACCGCAGAG AAGCCACGAA CCACGGGTTT
TGCGTTGAAC CAATAACTAA GCGCCACGTA AGAAGAACGA AGAGAGCTTC AATTGCGTCC AGGTTCAATC ACACATCTCT
TTATATTCTC CTTCTTCTTC CTGGGAAAAA AACCAGCAGA ATCTACTCCA ATTTTTCAGC TCAGATTTCC TTCTGCAATG
GCTCTCGCCG TTACTACAAC TTCTTCCTCC TCAACAGCAC CGTCCACTTC CTTCTTCTCG CGCCTTGGAT CTTCCTCCGA
CGTGAAAGGT GATAATCTCC CTTCCTTTCT TTTCCTCTTC TCTCCCGTTT TAACAAACAA CGAACTTGAT CTGAACCTCT
CACTTCTTAT CACAAGCTAG GTTTTCTTTG ATTAATGCTT GCTTGTTTCT GTTTTCAGCT CCGCAAACCG GTTCCTTTCG
GTTTCTGGAT GGGCCTCACG TTTCGTCCGT TGTTGTTAAT TTAACTCAAC GATGCTCCTC GGTCAGACCT CTCAACGCCC
AACCCCAACG GAATAATTCC GTTGTTCCTC TTGCAGCAAC TATTGTTGCT CCTGGTATGT TTTCTGCGTT CTGTTGTCAC
CACATTTCCT TGTTTTCAGG AAATTTTCTG TGTTGAATTT TTTTTCTGGC CTTGATTGGG GGCGATCTGA ACGTGTTTTT
TTAATGTTGT GGTGTGTGAT GTACAGAGGT TGAGAAGGGA CAGGAAGATT TCGAGCAATT AGCGAAAGAC CTTGAAAATG
CTTCTCCTCT TGAAATTATG GACAAGGCTC TCGAGAAATT TGGCAACGAC ATCGCTATTG CATTTAGGTA CATTCTTAAT
TTTATGTGTC GGTGCTTTGT TTATGTGGAC TTGCATGAAG ACATTCACAT ATGTTTGTAG ATAGTGACGT ACGAAGACAA
ACAGGAGACA GATGATTTTT TATCTTTCTC TTGTGTATAG ACAGGTTATA GTTGCATATT TCAACAAATC TTAATTAAGA
ATGTATAAAA TAAAATAAGT AAATGTATTT AATGTGATGA TAACATAAAA AAATGTTGTT AAGGACATTA ATCGGAAAAT
ACATAGGAAA ATTTGCAAAT AGAGTAAGAA GATTAATAGG AGAATGATTT GGAGGAGGAT TAAGAATTAT TCTGTTGGAA
ACGTTTTAAT AAATGTTTTC GTGTGTCACC CACCGAAAAT GCCAAATCGA TATGAAAATT GAAGAATCTA TGTGAAGATG
GCAGATCTGT TGAGTACATT CATTCTTGAG TACAATTTCG ACTATTGAAA TATAGTAGGC AATTAAGTTT TGTTCCTTGT
TTTATGTTGT AACAAACGTG TTCTGCTTGG CTATGTACCT GGTTTTGGAT TTTAATGGGT AGTTTTATTC TTTCAGCGGT
GCTGAAGATG TTGCTTTAAT TGAGTACGCG CATTTGACGG GTCGACCCTA CAGAGTGTTC AGCCTGGATA CTGGAAGGCT
GAACCCAGAA ACTTACAGAT TATTTGATGC AGTTGAGAAG CATTATGGAA TTCACATTGA GTACATGTTC CCTGATGCCG
TTGAGGTTCA GGCCTTAGTA AGAACCAAGG GGCTCTTCTC ATTTTATGAG GATGGGCATC AAGAGTGCTG CAGAGTAAGG
AAGGTGAGAC CCTTAAGGAG AGCCCTGAAG GGTCTCAGGG CGTGGATCAC TGGACAGAGA AAAGATCAGT CTCCTGGTAC
TCGGTCTGAA ATCCCTGTTG TCCAGGTTGA TCCTGTTTTT GAGGGATTGG ATGGTGGAGT TGGCAGTCTG GTTAAGTGGA
ACCCAGTCGC AAATGTTAAT GGGCTAGACA TATGGAACTT CCTTAGGACC ATGGATGTGC CTGTAAATTC ATTGCACTCC
CAAGGATATG TATCAATTGG CTGTGAGCCA TGCACAAGGC CAGTTTTACC TGGGCAGCAT GAAAGAGAAG GAAGGTGGTG
GTGGGAGGAT GCCAAGGCCA AGGAGTGTGG TCTTCACAAA GGTAATCTAA AACAGGAAGA TACTGCCCAG CTTAATGGAA
ATGGGGCCAC CCATTCAAAT GGCTCTGCCA CAGTCGCTGA CATTTTCAAT TCCCAGAATG TGATCAGCTT GAGCAGGGCT
GGAATTGAGA ATTTAACAAA ATTGGAGAAC CGAAAAGAAC CGTGGCTTGT TGTGCTTTAT GCACCATGGT GCCGCTTCTG
TCAGGTTAAA CTCTATTCCC TAAACTTCAA TTCTGTTAAT GTCGTGTCAC TAAGGTTCAT TCGGTTTGAA ATTACCATTA
TCTAATTCGA TGTTTATTGT GAACTGAAAC AGGCGATGGA GGAATCATAT GATGATTTGG CAGAGAAGTT GGCAGGGTCG
GGAGTGAAGG TTGCGAAATT CAGAGCGGAT GGAGAGCAGA AAGAATATGC AAAGAGTGAA CTGGAGTTGG GAAGCTTCCC
CACAATACTT TTCTTCCCCA AACACTCTTC TCGACCAATT AAGTACCCTT CTGAAAAGAG AGACGTTGAT TCGTTGACGG
CATTCGTGAA TGCCTTACGG TGATGGTCAG TTGAGTATTT CGCTCAATGT TCCGTCATAC AATGCTGGCA ATAAAATTCT
CCACAGATTT TGGCAATTCA GTGAAACTGG GGATGATGGC AGTTTTGATA GCAAAACAAA GATTCTCAGT TAGTAGCGTC
CGTGTATAAT ATTAGTTTAC CTTTCTCACG ATTATAATTG GTGTAAGAGG ATGAGATTTC ATGTCTGGGT TAGATGAGTA
GAGATGTGGT TGTATTATGC TGTTACTTAA CTATAAGAAT ATGGTTTTGT AGATTTTGCC AAATTTCTTG ATCGAATGCC
AATTAGTAAC CGTATACAGT TTCAGCTATA ATGTTGCGTC TGAAATAATA TCCATACCTC TTAGGTTTTC CTGGATTGTT
TTGTTAGAAG GTTCTAGCAA CTGGAGCAAA ACCAAATTTG GATTTCATCA TTGGGTTCCT ATTTTGTAGT GTTCTTTAAA
AGTATACTTT CAGTTTCAGG TATCCCGATG TATTGTGATG TTTATCACAC CACCACTACA GCTTTATTGA ATTAATTACT
CAATCCACCC GTTTCTATTT TGATCTATAC TATTTTATTG TTCTTGCGTG GTTCATTGGG TGACGAATCA ATCTTTTATT
GAATGATTTG AACCACGGAT GAATAA

>Vigan.05G083900.01
GGAAGATAAT GAATATTTAG AAGTGATATG TGAGTCCAAC TTGACCGCGC GACCGCAGAG AAGCCACGAA CCACGGGTTT
TGCGTTGAAC CAATAACTAA GCGCCACGTA AGAAGAACGA AGAGAGCTTC AATTGCGTCC AGGTTCAATC ACACATCTCT
TTATATTCTC CTTCTTCTTC CTGGGAAAAA AACCAGCAGA ATCTACTCCA ATTTTTCAGC TCAGATTTCC TTCTGCAATG
GCTCTCGCCG TTACTACAAC TTCTTCCTCC TCAACAGCAC CGTCCACTTC CTTCTTCTCG CGCCTTGGAT CTTCCTCCGA
CGTGAAAGCT CCGCAAACCG GTTCCTTTCG GTTTCTGGAT GGGCCTCACG TTTCGTCCGT TGTTGTTAAT TTAACTCAAC
GATGCTCCTC GGTCAGACCT CTCAACGCCC AACCCCAACG GAATAATTCC GTTGTTCCTC TTGCAGCAAC TATTGTTGCT
CCTGAGGTTG AGAAGGGACA GGAAGATTTC GAGCAATTAG CGAAAGACCT TGAAAATGCT TCTCCTCTTG AAATTATGGA
CAAGGCTCTC GAGAAATTTG GCAACGACAT CGCTATTGCA TTTAGCGGTG CTGAAGATGT TGCTTTAATT GAGTACGCGC
ATTTGACGGG TCGACCCTAC AGAGTGTTCA GCCTGGATAC TGGAAGGCTG AACCCAGAAA CTTACAGATT ATTTGATGCA
GTTGAGAAGC ATTATGGAAT TCACATTGAG TACATGTTCC CTGATGCCGT TGAGGTTCAG GCCTTAGTAA GAACCAAGGG
GCTCTTCTCA TTTTATGAGG ATGGGCATCA AGAGTGCTGC AGAGTAAGGA AGGTGAGACC CTTAAGGAGA GCCCTGAAGG
GTCTCAGGGC GTGGATCACT GGACAGAGAA AAGATCAGTC TCCTGGTACT CGGTCTGAAA TCCCTGTTGT CCAGGTTGAT
CCTGTTTTTG AGGGATTGGA TGGTGGAGTT GGCAGTCTGG TTAAGTGGAA CCCAGTCGCA AATGTTAATG GGCTAGACAT
ATGGAACTTC CTTAGGACCA TGGATGTGCC TGTAAATTCA TTGCACTCCC AAGGATATGT ATCAATTGGC TGTGAGCCAT
GCACAAGGCC AGTTTTACCT GGGCAGCATG AAAGAGAAGG AAGGTGGTGG TGGGAGGATG CCAAGGCCAA GGAGTGTGGT
CTTCACAAAG GTAATCTAAA ACAGGAAGAT ACTGCCCAGC TTAATGGAAA TGGGGCCACC CATTCAAATG GCTCTGCCAC
AGTCGCTGAC ATTTTCAATT CCCAGAATGT GATCAGCTTG AGCAGGGCTG GAATTGAGAA TTTAACAAAA TTGGAGAACC
GAAAAGAACC GTGGCTTGTT GTGCTTTATG CACCATGGTG CCGCTTCTGT CAGGCGATGG AGGAATCATA TGATGATTTG
GCAGAGAAGT TGGCAGGGTC GGGAGTGAAG GTTGCGAAAT TCAGAGCGGA TGGAGAGCAG AAAGAATATG CAAAGAGTGA
ACTGGAGTTG GGAAGCTTCC CCACAATACT TTTCTTCCCC AAACACTCTT CTCGACCAAT TAAGTACCCT TCTGAAAAGA
GAGACGTTGA TTCGTTGACG GCATTCGTGA ATGCCTTACG GTGATGGTCA GTTGAGTATT TCGCTCAATG TTCCGTCATA
CAATGCTGGC AATAAAATTC TCCACAGATT TTGGCAATTC AGTGAAACTG GGGATGATGG CAGTTTTGAT AGCAAAACAA
AGATTCTCAG TTAGTAGCGT CCGTGTATAA TATTAGTTTA CCTTTCTCAC GATTATAATT GGTGTAAGAG GATGAGATTT
CATGTCTGGG TTAGATGAGT AGAGATGTGG TTGTATTATG CTGTTACTTA ACTATAAGAA TATGGTTTTG TAGATTTTGC
CAAATTTCTT GATCGAATGC CAATTAGTAA CCGTATACAG TTTCAGCTAT AATGTTGCGT CTGAAATAAT ATCCATACCT
CTTAGGTTTT CCTGGATTGT TTTGTTAGAA GGTTCTAGCA ACTGGAGCAA AACCAAATTT GGATTTCATC ATTGGGTTCC
TATTTTGTAG TGTTCTTTAA AAGTATACTT TCAGTTTCAG GTATCCCGAT GTATTGTGAT GTTTATCACA CCACCACTAC
AGCTTTATTG AATTAATTAC TCAATCCACC CGTTTCTATT TTGATCTATA CTATTTTATT GTTCTTGCGT GGTTCATTGG
GTGACGAATC AATCTTTTAT TGAATGATTT GAACCACGGA TGAATAA

>Vigan.05G083900.01
ATGGCTCTCG CCGTTACTAC AACTTCTTCC TCCTCAACAG CACCGTCCAC TTCCTTCTTC TCGCGCCTTG GATCTTCCTC
CGACGTGAAA GCTCCGCAAA CCGGTTCCTT TCGGTTTCTG GATGGGCCTC ACGTTTCGTC CGTTGTTGTT AATTTAACTC
AACGATGCTC CTCGGTCAGA CCTCTCAACG CCCAACCCCA ACGGAATAAT TCCGTTGTTC CTCTTGCAGC AACTATTGTT
GCTCCTGAGG TTGAGAAGGG ACAGGAAGAT TTCGAGCAAT TAGCGAAAGA CCTTGAAAAT GCTTCTCCTC TTGAAATTAT
GGACAAGGCT CTCGAGAAAT TTGGCAACGA CATCGCTATT GCATTTAGCG GTGCTGAAGA TGTTGCTTTA ATTGAGTACG
CGCATTTGAC GGGTCGACCC TACAGAGTGT TCAGCCTGGA TACTGGAAGG CTGAACCCAG AAACTTACAG ATTATTTGAT
GCAGTTGAGA AGCATTATGG AATTCACATT GAGTACATGT TCCCTGATGC CGTTGAGGTT CAGGCCTTAG TAAGAACCAA
GGGGCTCTTC TCATTTTATG AGGATGGGCA TCAAGAGTGC TGCAGAGTAA GGAAGGTGAG ACCCTTAAGG AGAGCCCTGA
AGGGTCTCAG GGCGTGGATC ACTGGACAGA GAAAAGATCA GTCTCCTGGT ACTCGGTCTG AAATCCCTGT TGTCCAGGTT
GATCCTGTTT TTGAGGGATT GGATGGTGGA GTTGGCAGTC TGGTTAAGTG GAACCCAGTC GCAAATGTTA ATGGGCTAGA
CATATGGAAC TTCCTTAGGA CCATGGATGT GCCTGTAAAT TCATTGCACT CCCAAGGATA TGTATCAATT GGCTGTGAGC
CATGCACAAG GCCAGTTTTA CCTGGGCAGC ATGAAAGAGA AGGAAGGTGG TGGTGGGAGG ATGCCAAGGC CAAGGAGTGT
GGTCTTCACA AAGGTAATCT AAAACAGGAA GATACTGCCC AGCTTAATGG AAATGGGGCC ACCCATTCAA ATGGCTCTGC
CACAGTCGCT GACATTTTCA ATTCCCAGAA TGTGATCAGC TTGAGCAGGG CTGGAATTGA GAATTTAACA AAATTGGAGA
ACCGAAAAGA ACCGTGGCTT GTTGTGCTTT ATGCACCATG GTGCCGCTTC TGTCAGGCGA TGGAGGAATC ATATGATGAT
TTGGCAGAGA AGTTGGCAGG GTCGGGAGTG AAGGTTGCGA AATTCAGAGC GGATGGAGAG CAGAAAGAAT ATGCAAAGAG
TGAACTGGAG TTGGGAAGCT TCCCCACAAT ACTTTTCTTC CCCAAACACT CTTCTCGACC AATTAAGTAC CCTTCTGAAA
AGAGAGACGT TGATTCGTTG ACGGCATTCG TGAATGCCTT ACGGTGA

>Vigan.05G083900.01
MALAVTTTSS SSTAPSTSFF SRLGSSSDVK APQTGSFRFL DGPHVSSVVV NLTQRCSSVR PLNAQPQRNN SVVPLAATIV
APEVEKGQED FEQLAKDLEN ASPLEIMDKA LEKFGNDIAI AFSGAEDVAL IEYAHLTGRP YRVFSLDTGR LNPETYRLFD
AVEKHYGIHI EYMFPDAVEV QALVRTKGLF SFYEDGHQEC CRVRKVRPLR RALKGLRAWI TGQRKDQSPG TRSEIPVVQV
DPVFEGLDGG VGSLVKWNPV ANVNGLDIWN FLRTMDVPVN SLHSQGYVSI GCEPCTRPVL PGQHEREGRW WWEDAKAKEC
GLHKGNLKQE DTAQLNGNGA THSNGSATVA DIFNSQNVIS LSRAGIENLT KLENRKEPWL VVLYAPWCRF CQAMEESYDD
LAEKLAGSGV KVAKFRADGE QKEYAKSELE LGSFPTILFF PKHSSRPIKY PSEKRDVDSL TAFVNALR*