Variant information

Chr05:6401851 - 6405076

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6402046GA522026.771.00UPSTREAM(|4280||None|Vigan.05G083800.01), UTR_5_PRIME(|42||None|Vigan.05G083900.01)Vigna nepalensis
6402242TC572286.771.00INTRON(|||None|Vigan.05G083900.01), UPSTREAM(|4476||None|Vigan.05G083800.01)Vigna nepalensis
6402264AG532367.771.00INTRON(|||None|Vigan.05G083900.01), UPSTREAM(|4498||None|Vigan.05G083800.01)Vigna nepalensis
6402272TG532402.771.00INTRON(|||None|Vigan.05G083900.01), UPSTREAM(|4506||None|Vigan.05G083800.01)Vigna nepalensis
6402309CT441713.771.00NON_SYNONYMOUS_CODING(MISSENSE|gCt/gTt|A31V|None|Vigan.05G083900.01), SPLICE_SITE_REGION(|||None|Vigan.05G083900.01), UPSTREAM(|4543||None|Vigan.05G083800.01)Vigna nepalensis
6402340TG512341.771.00NON_SYNONYMOUS_CODING(MISSENSE|gaT/gaG|D41E|None|Vigan.05G083900.01), UPSTREAM(|4574||None|Vigan.05G083800.01)Vigna nepalensis
6402341GA532341.771.00NON_SYNONYMOUS_CODING(MISSENSE|Ggg/Agg|G42R|None|Vigan.05G083900.01), UPSTREAM(|4575||None|Vigan.05G083800.01)Vigna nepalensis
6402415CA582566.771.00SYNONYMOUS_CODING(SILENT|ccC/ccA|P66|None|Vigan.05G083900.01), UPSTREAM(|4649||None|Vigan.05G083800.01)Vigna nepalensis
6402425AG572515.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aat/Gat|N70D|None|Vigan.05G083900.01), UPSTREAM(|4659||None|Vigan.05G083800.01)Vigna nepalensis
6402502GC552155.771.00INTRON(|||None|Vigan.05G083900.01), UPSTREAM(|4736||None|Vigan.05G083800.01)Vigna nepalensis
6402884AG632583.771.00INTRON(|||None|Vigan.05G083900.01)Vigna nepalensis
6403227CT562154.771.00INTRON(|||None|Vigan.05G083900.01)Vigna nepalensis
6403270TC672598.771.00INTRON(|||None|Vigan.05G083900.01)Vigna nepalensis
6403398TC592345.771.00SYNONYMOUS_CODING(SILENT|gaT/gaC|D160|None|Vigan.05G083900.01)Vigna nepalensis
6403782AT762944.771.00SYNONYMOUS_CODING(SILENT|gtA/gtT|V288|None|Vigan.05G083900.01)Vigna nepalensis
6404616AC461784.771.00UTR_3_PRIME(|183||None|Vigan.05G083900.01)Vigna nepalensis
6404773AT552185.771.00UTR_3_PRIME(|340||None|Vigan.05G083900.01)Vigna nepalensis
6404955TC431727.771.00UTR_3_PRIME(|522||None|Vigan.05G083900.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6402527AAT501412.731.00INTRON(|||None|Vigan.05G083900.01), UPSTREAM(|4762||None|Vigan.05G083800.01)Vigna nepalensis