GBrowse Details

Vigan.05G063300.01

Basic Information:
Name: Vigan.05G063300.01
Multiple alignment
Variant Information
Position: Chr05:4575269..4577728 (+ strand)
Length: 2460
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.09,1.59,10.37,7.33,1.42,4.13, 1.60
Automatic updates:
Name: NM_001354185 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100800652 (LOC100800652), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:4575269..4575543 (+ strand)
Length: 275
Type: five_prime_UTR
Position: Chr05:4575544..4575720 (+ strand)
Length: 177
Type: CDS
Position: Chr05:4576457..4576522 (+ strand)
Length: 66
Type: CDS
Position: Chr05:4576900..4577403 (+ strand)
Length: 504
Type: CDS
Position: Chr05:4577404..4577728 (+ strand)
Length: 325
Type: three_prime_UTR

>Vigan.05G063300.01 class=Sequence position=Chr05:4575269..4577728 (+ strand)
AATGCACGTG ATATCTTTTT GGTTTCCATT TGGAAGACTT GGTCGTTTGC AAGAAACAAC AGAAGTCCAT GCAGAAGGAA
ACAACGAGTT GAGTTCCTCA AACCAATTAG AAACCTTTCT ATAAAGCAGC TTCAAATTGA TGGAAGCTTC GGGTATGCGT
GTTTTATGGT TTATTTTTCG TATTTGAAGA TTCTCAGAGA CAAATAGAAA CATTGGTAAT TTAGTGCCAG TGAAGGAGCT
TAAAAGCAAG GCTAAGATAT ACACAGTACA AACGTATGAT GGCATGTTCT GTGCCTTTTA ACAAGAAGAA TTTGGACATA
AGTTTCTTCG TTTTCAAGCC AACTATTGTG ATCATAGATG ACCTAGTTCA TGAACTCAAA CACTTCTCCT TAACTACTGA
GAACCTTGGC TGTGTTCAGA GCTCTATATT TAGAAGCATC CATGGAAATA TGGTAAGTTT TTTCTTTAAT TTCTCAGTCT
TTTTAATTTT AAATCATTTC TCATAGGCTT AATTATCTCG GTTTTGAATT GTATGATCTA AATTTCTGTG TCTAGTTGGT
TCAATTGGTT TGAAACTTGC TGATTATAGT TTATGAAAAC CCGTTTTTTA TCCTTGAATG ATACCAATAA TTGGGTTGGA
AGACAATAAC TGATCAGTTT GCATCCTAAA TTGATTAATT ATATTTTATC ATTCTTATTT TCAGATTTGT TTTCCACGTG
GGATTTTGGA CCCACGAGTT CATGTTCATG AAGAACTTCT ATCTTTCAAT GAATGACAAC TTCAGATGCC ATTGCTTCAT
GGTAGTTTAC CATCTGTAAT GGTTTAATCT GTCATCAATT TACCGATATA TCCGTTTAAC ATCAGTGATT TTGCTTGTGT
TCAATTAACT AGTTTTTACC ATGTGGGTTC TCAGTGATAA TCAATTTCCT GAATTAGCAG CAGAAAATTA TAAATTTCGA
CAATAATTAC CCCTGTTTCA TTGATTAAAG TTATTTTTTG GACCCAACAA AACTCTAAAC GTGTACTGTA CTTACACCGA
TCATCCCACA AATGATGTTT TGTTCTGTTC TGTGTTAATG GTAAACTCTT TGGGTTGATG TTCTTCTGAT TGGGCTTATC
AGACACCATT GTTCTTTATC TTTCTTGATT TATTTGTTAA CTTTGTGATA TTTATGCTGT GTAATCAGAT CATATGGTAT
GGAGCATGGC CGAGGCAGTC GAGTAAGGAA AAAGAGGAGC TGACCTCAAC CCTTGTAAGT TGGACTCTTT CTTGAATAAT
CAAAATATGA AAAGTAACCA ATTCCTAATA AAATTCATTT GAAAACAATG ACATTTGCTT CAACGAAATC AACTGCCAGC
CCACACAGGT TGAACAATTG ATATCATTTT AAGGACTAGT CGTTCAGAAT TTGGCTCACA CATCTTTAAC TATTAAGAAA
TGCACAAGAG ACATGCAAAG GAAAAATGTT CTCTTTACCG AATTGTCACC TTACTAGGTT ATAAACTACA TTAGAACATG
TAAACTCTTA TTAATTCTTT AGCTATCTTT CACTTTAATC AACATACACT GATAACCTTT TCCTTTTTAG TTTTCTATGT
ATTTATTTAT GCTATTGTTG GCACTCTACA GAAAACAATG TTAACCAACA GCATATCAAC CATGGCTGTG TTAACTGATC
ACAGTTTCCT TGAAGCATAT GGTGGAGAGT CAAGAGACGG GTCTTCCACA GCAAAATTCT CCACTGGGGA CATATTATCC
TTGAACTCAG CAGTGACCAC TACCAATGAC CTTAATGATC TCTGCTACGC TGTTCTAGCA ATTTTAAGGT CTCGCTTTGC
CAAAATTGAA GGAACAATCT CTGGGCTTTG CTTCAAGGGA CAAAGCAAAC CCAGAATGGT GTGCATGCAT GTCTGGAAGT
CTCTCCATTT TTGTTACTCA TGGATTCTGA ACTCCGACCA AAGAAAATGG ATGATGCCAT ATCTCGAACG TTTCTCCATT
GAGATGAAGT ATGACATTTT CCGAGTAGTG TATGTCAGTG GTGACAATGT GGTTGATTTC AACTGTGTTT CTACTCATCA
GATGTTAGAA AATGGGAAGG AGAAGAGCAT GCAAGGGCAG GTTATGCAGA ACTGAGATAG CTGCAAAGGG TTTCAAGTTT
ACAACCATCA TCTTTTGCCG ACTTTTTAAA CTCCCTCTTA TACTGTAAAT ATTGCAAGTT ACTCTCAAAG TCAGGTTACA
GTTTAGAACT CAAAATCCTA TGTAAGGTTT TGGTTTTGGT TTCGGACTGC AAAGTCTTGA TCAGTGAAAG AATGAATCAT
ATTTAATAAA GAAATACTGT GTAAGGTTTT GGCTTACACG TCTTAATGTT CAGAAAAAGT ATGAATCAAA AGGTTCGATT
TCAGAAATAG TGTGAAATCC CTTGAATCAT TCTTGTTTTC AAACCCACCC CAGAGTTGAA 

>Vigan.05G063300.01
AATGCACGTG ATATCTTTTT GGTTTCCATT TGGAAGACTT GGTCGTTTGC AAGAAACAAC AGAAGTCCAT GCAGAAGGAA
ACAACGAGTT GAGTTCCTCA AACCAATTAG AAACCTTTCT ATAAAGCAGC TTCAAATTGA TGGAAGCTTC GGGTATGCGT
GTTTTATGGT TTATTTTTCG TATTTGAAGA TTCTCAGAGA CAAATAGAAA CATTGGTAAT TTAGTGCCAG TGAAGGAGCT
TAAAAGCAAG GCTAAGATAT ACACAGTACA AACGTATGAT GGCATGTTCT GTGCCTTTTA ACAAGAAGAA TTTGGACATA
AGTTTCTTCG TTTTCAAGCC AACTATTGTG ATCATAGATG ACCTAGTTCA TGAACTCAAA CACTTCTCCT TAACTACTGA
GAACCTTGGC TGTGTTCAGA GCTCTATATT TAGAAGCATC CATGGAAATA TGATCATATG GTATGGAGCA TGGCCGAGGC
AGTCGAGTAA GGAAAAAGAG GAGCTGACCT CAACCCTTAA AACAATGTTA ACCAACAGCA TATCAACCAT GGCTGTGTTA
ACTGATCACA GTTTCCTTGA AGCATATGGT GGAGAGTCAA GAGACGGGTC TTCCACAGCA AAATTCTCCA CTGGGGACAT
ATTATCCTTG AACTCAGCAG TGACCACTAC CAATGACCTT AATGATCTCT GCTACGCTGT TCTAGCAATT TTAAGGTCTC
GCTTTGCCAA AATTGAAGGA ACAATCTCTG GGCTTTGCTT CAAGGGACAA AGCAAACCCA GAATGGTGTG CATGCATGTC
TGGAAGTCTC TCCATTTTTG TTACTCATGG ATTCTGAACT CCGACCAAAG AAAATGGATG ATGCCATATC TCGAACGTTT
CTCCATTGAG ATGAAGTATG ACATTTTCCG AGTAGTGTAT GTCAGTGGTG ACAATGTGGT TGATTTCAAC TGTGTTTCTA
CTCATCAGAT GTTAGAAAAT GGGAAGGAGA AGAGCATGCA AGGGCAGGTT ATGCAGAACT GAGATAGCTG CAAAGGGTTT
CAAGTTTACA ACCATCATCT TTTGCCGACT TTTTAAACTC CCTCTTATAC TGTAAATATT GCAAGTTACT CTCAAAGTCA
GGTTACAGTT TAGAACTCAA AATCCTATGT AAGGTTTTGG TTTTGGTTTC GGACTGCAAA GTCTTGATCA GTGAAAGAAT
GAATCATATT TAATAAAGAA ATACTGTGTA AGGTTTTGGC TTACACGTCT TAATGTTCAG AAAAAGTATG AATCAAAAGG
TTCGATTTCA GAAATAGTGT GAAATCCCTT GAATCATTCT TGTTTTCAAA CCCACCCCAG AGTTGAA

>Vigan.05G063300.01
ATGATGGCAT GTTCTGTGCC TTTTAACAAG AAGAATTTGG ACATAAGTTT CTTCGTTTTC AAGCCAACTA TTGTGATCAT
AGATGACCTA GTTCATGAAC TCAAACACTT CTCCTTAACT ACTGAGAACC TTGGCTGTGT TCAGAGCTCT ATATTTAGAA
GCATCCATGG AAATATGATC ATATGGTATG GAGCATGGCC GAGGCAGTCG AGTAAGGAAA AAGAGGAGCT GACCTCAACC
CTTAAAACAA TGTTAACCAA CAGCATATCA ACCATGGCTG TGTTAACTGA TCACAGTTTC CTTGAAGCAT ATGGTGGAGA
GTCAAGAGAC GGGTCTTCCA CAGCAAAATT CTCCACTGGG GACATATTAT CCTTGAACTC AGCAGTGACC ACTACCAATG
ACCTTAATGA TCTCTGCTAC GCTGTTCTAG CAATTTTAAG GTCTCGCTTT GCCAAAATTG AAGGAACAAT CTCTGGGCTT
TGCTTCAAGG GACAAAGCAA ACCCAGAATG GTGTGCATGC ATGTCTGGAA GTCTCTCCAT TTTTGTTACT CATGGATTCT
GAACTCCGAC CAAAGAAAAT GGATGATGCC ATATCTCGAA CGTTTCTCCA TTGAGATGAA GTATGACATT TTCCGAGTAG
TGTATGTCAG TGGTGACAAT GTGGTTGATT TCAACTGTGT TTCTACTCAT CAGATGTTAG AAAATGGGAA GGAGAAGAGC
ATGCAAGGGC AGGTTATGCA GAACTGA

>Vigan.05G063300.01
MMACSVPFNK KNLDISFFVF KPTIVIIDDL VHELKHFSLT TENLGCVQSS IFRSIHGNMI IWYGAWPRQS SKEKEELTST
LKTMLTNSIS TMAVLTDHSF LEAYGGESRD GSSTAKFSTG DILSLNSAVT TTNDLNDLCY AVLAILRSRF AKIEGTISGL
CFKGQSKPRM VCMHVWKSLH FCYSWILNSD QRKWMMPYLE RFSIEMKYDI FRVVYVSGDN VVDFNCVSTH QMLENGKEKS
MQGQVMQN*