GBrowse Details

Vigan.04G428400.01

Basic Information:
Name: Vigan.04G428400.01
Multiple alignment
Variant Information
Position: Chr04:53487697..53491286 (+ strand)
Length: 3590
Functional Information:
Description: Similar to Uncharacterized protein. [K7MP90, Glycine max]
GO: Biological Process: protein import into mitochondrial outer membrane (GO:0045040)
Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742)
Molecular Function: protein binding (GO:0005515)
InterPro: Plant specific mitochondrial import receptor subunit TOM20 (IPR010547)
Tetratricopeptide-like helical (IPR011990)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.12,2.29,10.05,3.76,23.49,23.51,9.86,6.85
Arabidopsis thaliana homolog: AT1G27390.1
Automatic updates:
Name: NM_001251093 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527313 (LOC100527313), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:53487697..53487698 (+ strand)
Length: 2
Type: five_prime_UTR
Position: Chr04:53487699..53487860 (+ strand)
Length: 162
Type: CDS
Position: Chr04:53488303..53488381 (+ strand)
Length: 79
Type: CDS
Position: Chr04:53488500..53488669 (+ strand)
Length: 170
Type: CDS
Position: Chr04:53488765..53488812 (+ strand)
Length: 48
Type: CDS
Position: Chr04:53490436..53490519 (+ strand)
Length: 84
Type: CDS
Position: Chr04:53490841..53490966 (+ strand)
Length: 126
Type: CDS
Position: Chr04:53490967..53491286 (+ strand)
Length: 320
Type: three_prime_UTR

>Vigan.04G428400.01 class=Sequence position=Chr04:53487697..53491286 (+ strand)
CAATGGACTG CTGGAGTTTG CAGTTGCAGT CACGGGCATT TGGCGTTCTG CGATCACAGA AGGGAATGGA GTATTCTCAA
GATGATTTCG ATCGGTTACT GTTATTCGAG CACACGCGGA AGACCGCTGA AGCAAACTAC GCTAAGAATC CTCTTGACGC
CGATGTACGT ATTGTTCTTC GCTGACCTAA TATTCCTTCC TTACACTTAT GCATGTGAGT TGCTTTGCTC ATACTCGTGC
ATGAAATGAA ATTGTTGCTA GTGTTGTTTT TCTGTTATTA GTCAATGTCA CATTACGTTA TGTAAAATAG GAACGCCAAA
ACATAGATAT AATGAAATTA TCTTCGAACT GAACTTTCAC CTCAGTAATG AGCAAAATGC AGGTTTGGTT TTACGGATTA
TGCTGATTAT TGAGGTGAAA CTTCAATTCT GATTGGAGAA TAACCCCTAA TTTACTGTAA CTAAGTTTTA TTGGAAATTA
TGTTTATGGA GTTATGCGTT TTTGTGGCTT TGTAGTTTAG AAAATAGCTT AGGTTTATTT TTTTCTTACA GAAATAGCTG
GAACAAAAGT AAATGTGTAT AATCTTGTAT ATGAATATTC ATACAGAATC TGACCAGGTG GGGGGGAGCT CTGATCGAGT
TGTCGGCTTT CGAGAAGCCT AAGGATTCTA AGGCGATGAT TAATGGTATA TAGCGTGATA AATTGAGCAA AATTTAGAAG
TGAATTTTTG TTTTGGCATA GTGATGGGCG AGTTACTATG ATTGATTGTT TTGGGCTTTG GTGGGAACCA ACCATCTAAA
CAGATGCCCT TTCAAAGCTG GAAGAGGCTT TGCTGATCAA TCCAACGAAG CACGACACTC TTTGGTACTT GGGAAATGCA
CACACGTCAT GTGGGTTTCT AACGCCGGAT ATCAGTGAGG CAAAGGATTA TTTTGAGAAG GCACATGAGT ATTTCCAGAA
AGCTTTTGAT GAGGTAATGA TATGTTTGAT TTATGTGCAT TCTTCTTCGT TATTATTACA GGTTGTTGCA AATCCAGTAG
ATACTTAGTG GTGGTTCTGA AATTGTAGGA TCCTGAAAAT GACCTCTATA GGAAGTCCTT GGAAATTGCT GTGAAGGTAA
TGGAATTGCT ATGACCACTG TATCAATATT ATTTTTGCAA CTCATTTAAT TCTCGTGTTC CAAACTTTAC ATAAAAATAT
CAAATCAGCT AAAAGTACCT TGTGATGTTT GTTGTGACCC AATGAACGTT TAAATATGTT CTCAACATTT TGATTTTAGT
AACATCAACT GTGTTAACCT TTTTTTCAAC TCAAAACATC GTACCCTTCT TCAACTCCAT AAGCATTTGT AAAAGAAAAC
ACATCATCAT TCAACAGCAT GGAAACACTA TGAACCGTAT ATACCAGACA AGCTTATACA CTAATCCACA TTGTACAAAG
CCTCAAATAT CCCCTCAGCC ATTGCTGGAG AAACCACATG AACCAGCCCT GTTTCCTCAT TTTAACCGAC CCATATAACC
CCTGTTATCC AAACTGCAAC ATCCATGAAT TATCCACAAA TGTTAACCGA CCCAGTCGTG AACCATCACC ATGAGCATCC
ATCACACTTC CTTACCTGCA CCACTATACC CAAAATGCTC AGCTTTGAAT TTTGATTCCA TTGAAAGGCC CAACATCCAT
TGCCTTTTAT GTCATTCATT CTTATTATTT ACTTGTCAAT GTATGAAAAA CTTTAAGATT TAAGTGCATT TAAATTAGGG
GTTTCCGTAG TATGAGTATT CAAAAAGAGA GATCAGATTT TAATCTTGGA CTTAACATTA CATGTGTACT TAAGGGAACG
ATATTAGTTG TCTGATATAT CAGTTCTTCT TTTGTTTATT ATTGATTTTG CTGTAATCGC AGGACTTCTT TGAGACTTGA
GTTTTTAGGT AGGTATATAT CTTTTTAAAT TACTGTAGAA AAATAATGAT AAACAAATTG AATATTATAT CTTTGTTTAG
GGTGAAAACA ATAAAATAAA CCAATCAAAT GAACTTTCGA AAATAAGATC TTTACAATTT ACTAAAATTA AAACTAGTTA
ATCCATAAAC CTTTTTTGAG AACGCGACTG AGTTCTCCAT TCCTTTAGAA GATACGTAGA TGCAGAAATT TTCTCATTAG
GCTATATATT ATTTTCATAA TTTGGATCTT TTGAGAATAA TTATTTTGTT TCCTTTGTTT TATTTCATTT TCAACAGTAA
AACGAATACT TAATCTTTAT TAATTATTTT TACAATTTAA TTTTGGTTAA CCATTTCTAA CCGGGAATAT CTTAAGGGTA
CAATGTTATA ATTTGTCATC ATTCCTTGTG GAAAATTACA CTTTTAAGCT TAATATCTAT CTTTAGAAGC TAGTTTTCAA
TATATATATA TATATAAAAT TAAAAAAAAA ACTGATTAAT AAAAAGTTAT TGCTACTTTA TATATTAATT TTAAAAAAAA
AGTTCTTAGT TACTTGTTGT CTTAACACCC TCCATCAAAT CGGGGATAAG GCCTTGTGTT TGCTTGTGTA TGTTTGTGAT
TTCACATTTC ATAACCTTTA TTCACACTTA TGATAAATAA GTCTTACTGG TAGAACAGCT TAGGTATTTT TTCTATATGC
AATGAAAGTA ATTGCTTTCT TCATTCTGTT TTTTTCTGAT AATATTGTTT AATTATATAT TTTCTACTCT GACGGCTTGC
TGTGAACCAT GCTTCATAGG CTCCAGAACT ACACATGGAG ATCCATAATA ACGAGCTTGG TCCGATGAGT AATGCGGGAT
CCTCTGCTAC TTCAAAAGGA AAGGTTGTAT ATATTGAAAC TTTATTGTAT TTGATTAAAG TTAGTCTTTG TATTACACGT
GCTTATTGAT GACCTAAAAT CAACTTCAAC CTGCTCTGTC TTGTTAATGG AAGTGGCTTC TTGATAATTT CAAAATGCTC
AAATGGAGTT TTTGTTTTAG TTCTGTGGAA AAAGCCTTGT TTGAAAAGTT ACTCATGATT ATTTTGTATG AGACTATATG
TATTCAATAA TCTATAATGG AGCATGTTAT TTCTGATAAC CGATCCATGT CTGCTTTAGC CTTTTTATGG AAGAACCTTA
ATGTCATCGT TTGTCTCATC TCAGGAATCT AAACGGCAGA AGAACAGTGA CTTTAAGTAT GACATATTTG GATGGGTTAT
TCTTGCGGTG AGTATAGTAG CATGGGTGGG AATGGCCAAA TCTAACATTC CACCGTCACC TCCTAGATAA ACATTTTTCT
TTGATGCTTT ACCTAAGAAA TTGGTGATAG GTTGTGTACT TTAGACTGGA ACTTGTGTGG TGTCTACTTA CTGACTTCAT
TTATCATTAA CTTATTTTTT TGCCGTCCAA AAGATTGGCT TTTTAAGAAT GCCGCTTTTT TAGCATAAGT CGTCAAAGTT
TCTCCATACT GATTTCATTT GTCACTTTTT ATGTCGACAG CCTGATTTCA TTTATTTCTG TATGTCCTGT TATTTTTATT
TTTATTTTTG TAAGATTGTT AATCACTGTA CAATGGTATT TTGATACCTA AAATTTTTTA TACCCATTTT 

>Vigan.04G428400.01
CAATGGACTG CTGGAGTTTG CAGTTGCAGT CACGGGCATT TGGCGTTCTG CGATCACAGA AGGGAATGGA GTATTCTCAA
GATGATTTCG ATCGGTTACT GTTATTCGAG CACACGCGGA AGACCGCTGA AGCAAACTAC GCTAAGAATC CTCTTGACGC
CGATAATCTG ACCAGGTGGG GGGGAGCTCT GATCGAGTTG TCGGCTTTCG AGAAGCCTAA GGATTCTAAG GCGATGATTA
ATGATGCCCT TTCAAAGCTG GAAGAGGCTT TGCTGATCAA TCCAACGAAG CACGACACTC TTTGGTACTT GGGAAATGCA
CACACGTCAT GTGGGTTTCT AACGCCGGAT ATCAGTGAGG CAAAGGATTA TTTTGAGAAG GCACATGAGT ATTTCCAGAA
AGCTTTTGAT GAGGATCCTG AAAATGACCT CTATAGGAAG TCCTTGGAAA TTGCTGTGAA GGCTCCAGAA CTACACATGG
AGATCCATAA TAACGAGCTT GGTCCGATGA GTAATGCGGG ATCCTCTGCT ACTTCAAAAG GAAAGGAATC TAAACGGCAG
AAGAACAGTG ACTTTAAGTA TGACATATTT GGATGGGTTA TTCTTGCGGT GAGTATAGTA GCATGGGTGG GAATGGCCAA
ATCTAACATT CCACCGTCAC CTCCTAGATA AACATTTTTC TTTGATGCTT TACCTAAGAA ATTGGTGATA GGTTGTGTAC
TTTAGACTGG AACTTGTGTG GTGTCTACTT ACTGACTTCA TTTATCATTA ACTTATTTTT TTGCCGTCCA AAAGATTGGC
TTTTTAAGAA TGCCGCTTTT TTAGCATAAG TCGTCAAAGT TTCTCCATAC TGATTTCATT TGTCACTTTT TATGTCGACA
GCCTGATTTC ATTTATTTCT GTATGTCCTG TTATTTTTAT TTTTATTTTT GTAAGATTGT TAATCACTGT ACAATGGTAT
TTTGATACCT AAAATTTTTT ATACCCATTT T

>Vigan.04G428400.01
ATGGACTGCT GGAGTTTGCA GTTGCAGTCA CGGGCATTTG GCGTTCTGCG ATCACAGAAG GGAATGGAGT ATTCTCAAGA
TGATTTCGAT CGGTTACTGT TATTCGAGCA CACGCGGAAG ACCGCTGAAG CAAACTACGC TAAGAATCCT CTTGACGCCG
ATAATCTGAC CAGGTGGGGG GGAGCTCTGA TCGAGTTGTC GGCTTTCGAG AAGCCTAAGG ATTCTAAGGC GATGATTAAT
GATGCCCTTT CAAAGCTGGA AGAGGCTTTG CTGATCAATC CAACGAAGCA CGACACTCTT TGGTACTTGG GAAATGCACA
CACGTCATGT GGGTTTCTAA CGCCGGATAT CAGTGAGGCA AAGGATTATT TTGAGAAGGC ACATGAGTAT TTCCAGAAAG
CTTTTGATGA GGATCCTGAA AATGACCTCT ATAGGAAGTC CTTGGAAATT GCTGTGAAGG CTCCAGAACT ACACATGGAG
ATCCATAATA ACGAGCTTGG TCCGATGAGT AATGCGGGAT CCTCTGCTAC TTCAAAAGGA AAGGAATCTA AACGGCAGAA
GAACAGTGAC TTTAAGTATG ACATATTTGG ATGGGTTATT CTTGCGGTGA GTATAGTAGC ATGGGTGGGA ATGGCCAAAT
CTAACATTCC ACCGTCACCT CCTAGATAA

>Vigan.04G428400.01
MDCWSLQLQS RAFGVLRSQK GMEYSQDDFD RLLLFEHTRK TAEANYAKNP LDADNLTRWG GALIELSAFE KPKDSKAMIN
DALSKLEEAL LINPTKHDTL WYLGNAHTSC GFLTPDISEA KDYFEKAHEY FQKAFDEDPE NDLYRKSLEI AVKAPELHME
IHNNELGPMS NAGSSATSKG KESKRQKNSD FKYDIFGWVI LAVSIVAWVG MAKSNIPPSP PR*