VIGGS:Variant information

Chr04:53487697 - 53491286

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
53488100	T	A	58	2249.77	1.00	DOWNSTREAM(\|598\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01)	Vigna nepalensis
53488633	G	C	54	2116.77	0.98	DOWNSTREAM(\|1131\|\|None\|Vigan.04G428300.01), NON_SYNONYMOUS_CODING(MISSENSE\|gaG/gaC\|E125D\|None\|Vigan.04G428400.01)	Vigna nepalensis
53490728	G	A	72	2873.77	1.00	DOWNSTREAM(\|3226\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|3054\|\|None\|Vigan.04G428500.01)	Vigna nepalensis
53490802	T	G	76	2875.77	1.00	DOWNSTREAM(\|3300\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|2980\|\|None\|Vigan.04G428500.01)	Vigna nepalensis
53490820	T	C	71	2828.77	1.00	DOWNSTREAM(\|3318\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|2962\|\|None\|Vigan.04G428500.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
53490095	A	AATATATATATATATATATATATATATAT	12	733.73	1.00	DOWNSTREAM(\|2594\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|3686\|\|None\|Vigan.04G428500.01)	Vigna nepalensis
53490117	TA	T	14	363.73	1.00	DOWNSTREAM(\|2616\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|3664\|\|None\|Vigan.04G428500.01)	Vigna nepalensis
53490168	T	TA	27	709.73	1.00	DOWNSTREAM(\|2667\|\|None\|Vigan.04G428300.01), INTRON(\|\|\|None\|Vigan.04G428400.01), UPSTREAM(\|3613\|\|None\|Vigan.04G428500.01)	Vigna nepalensis