GBrowse Details

Vigan.04G394200.01

Basic Information:
Name: Vigan.04G394200.01
Multiple alignment
Variant Information
Position: Chr04:50826163..50829213 (+ strand)
Length: 3051
Functional Information:
Description: Similar to Uncharacterized protein. [I1JQM2, Glycine max]
InterPro: NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5 (IPR019342)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:76.31,53.62,82.11,56.75,98.95,176.48,102.74,54.59
Arabidopsis thaliana homolog: AT3G62790.1
Structure :
Position: Chr04:50826163..50826271 (+ strand)
Length: 109
Type: five_prime_UTR
Position: Chr04:50826272..50826421 (+ strand)
Length: 150
Type: CDS
Position: Chr04:50828833..50828931 (+ strand)
Length: 99
Type: CDS
Position: Chr04:50828932..50829213 (+ strand)
Length: 282
Type: three_prime_UTR

>Vigan.04G394200.01 class=Sequence position=Chr04:50826163..50829213 (+ strand)
GCAAAGATAG AGAAGGTGGT AGTTTGGTAA TTTAGGGTTG GTAGAAGGGG AAGAGGGTTT GAAGTTGAAA GAAGCAGTGA
GATCAGAGAG CGAGAGAGAA AGAGAGACAA TGGCGTCAGG CTGGGGAATT ACAGGCAACA AAGGTCGGTG CTACGATTTC
TGGATGGATT TCAGCGAATG CATGTCTCGC TGCCGAGAAC CCACGGATTG TGGTCTTCTC CGTGAAGATT ACCTCGAGTG
CCTCCACCAT TCCAAAGAGG TATTTTCCCT AATCCTCCCC TCTTTTTAAT TCCCCTTTCG TTTATCGCAT CCACGAACTT
CCTTTATCCA ATCTGTAATT CTTACTTATA TTCTTTCATC TCGTTTGCCA ATCCTGTTGA TTTCCGTTGC ACTGCTTCGC
TTCTCTTCTC TTCTCATCTC TCTTTCCCTT TACTTAGATC GCCTTTTGTG GTTTCCTCTT GTCTTTGGGA TCTTGTATTG
TTGTTGATTC GATTAAACTA TCTCGAACGG AAGAGACGGC TGAAGAAGTG TTTAACCTAG AATTTAATTT GCTAGTTCCC
CGCTTGCATT TCTGCTTGTA TCACACCGGA AAGTTGAGAT GGGTGTGGCG TTTAAGGACT GTCACTATTA TGATGAAAAA
GGAACTGAGT TTTCATATAA TTTATTTTAA TGATTGAATA AGTTCTCTTT ACTTGTAAGG TAAAATGTAT TTGATTAAAT
TGGGCACTGT TACTGTGAAA ACCTTTTAAT AGCTGGTTTA GTTGTGGAAT ATAATTCTCC TCAGCGACGT TAGTACAAAA
AATAGAGTAA AAAGAAATCT TGTAGCTCTT CGCTCGTAAT TGATCTAAAA CTACTCAGAT CTTTTGTTGT TTTCTTTTAT
TTTTATACAT GTTATCTAGT AGCAGTTTAA TTGATCAACT AATTGAGCAG TGTCAGGATG AGATTGATAT TGTGAAAGGC
CTCGCAATCT ATGGTAAAGC ATTGAATTTC TTCATGCACA GTTAGTTTCA TCCCATCCAT TCTCTCCATG TGTCCAGTTT
TTGTCTCTTC GAAATTAGGC CTTTGATAAT CAAGTATGGG TAGTGGGAGA GATATTTCTT TATTCTATGC CTCTGGCTCC
AATTCAAATT TCGTATGCTG TGCTATTAAC ATATTCATGT TGTATTTTTA TTTGATGTTA ATATGAAAAT TTTTGGTTGG
CCTTGAAAGT TTCAACATAT GGTTTTGTTT AAATCTTGTA AAGTTATTTG CCTTTTCCCT GCAGCAATCA CATGTTAAAT
TCTATCTTAG TCTTGGAGTT CCCAATGAAT TGAAAACAAC ACTGGGTTTG TGCTGATTAC TTTAGATTCT CTGGTTTCGT
TTTGTTTCTC TTTGTCGGAA ACTGTGTTCT TCTTTAGTGT GTGTACCAAA AGTATTTGTT GCATAACTGA ATTTGCTCAT
AGATTATGAA CTTCAAATAC GACTGGACTT TAAATATTTG ATTTGACAGT AAGCCTGTTA AGTTCTAAAA TTTGTTTCTT
CTCTTGCTTT CTAAACACAT TTTTTATATT TATCTTTTGT AGCTCATATG GTGGTTTTAT CTAATTAACA ATGGATAATG
GGATATCAGT TGTTTGCAAT TTGGCTGAAC TCAGTGCTTA AAATTATTCG TAGACCCTTC TATATACAAC TCAGAATGTA
TAATCCTGTG GTTGACTGAC AATAGTATGC TGTTTAATTT CAGATTTCTA ATGTTATTAT AGTATAATGC TGTTTAATTA
TAACTTCGTA AGTTCAGAAA CTTTCATGTG GTTGAGGAAC TCAAAAATCC TAATATAGTG TCTAGAAGAA TTACAGACTT
TCACGTGGTC GAGGGACTCG TAAATCCAAA TAAACTTCTA TGAATTTCAG ACTTTTGTGA AGAATTACAC ATATTAATCA
CCCTTATGTC ATTATATTCA CAATTCATAG TGGCGTGTCT TTAATGAAAA TGTTGGCTAA AGAAATCAAT CAGAGTGGAT
AAAGCTGTGT TTTTTTTTCT TATTCTGTAA ACCATGGGAT AACCTTGTGT CACAATATTA TTTCCTTGAC ACCCTTTCAT
CCCATTATCT ACCTAAAAAT TGCTTATGCT CTGCATCGAC CACCAAATGG GAAATAGAAC AAAAAGTGAT GTTTGTAACT
TAAGTTTCGG TATTTTTTTC TCTCTATATT GCCCCTCAGT GCATCAAAAG CACGCCCATA GATATTTTAT CTTTTTATAC
GAAAGGATAA CTCGGGGAAT GATTGCTTTG GGAGGCAGTG AAGACCATGC TTCCCATAAG AATCAGAATA TGGTGTGAAA
GTTGTAGAAC CTGTTTGGGA AACTAAGGGT AATATGGATG TTGAAAATTA CTAGAGTAAA CTTTAGGCAT AAAGAATTCC
CGATTTCATA GCTCTCGTAC CTATAATGTT TTCTCAATGA AACATTCTTT TCTACAGTTA TATGCCCTGG TATTTTAGTT
CAAAACTTGA AAGCAACTGA GAATGTCATA TTATTAAAAA AAATTGACAA TTTTTACTTT GCCCAAGCAG TGATGGGAAT
GACTTTCTTC TCCGGATACA GTGTTGTTAT ACACTCCGTG TAAACCTTTT AATACGGTTG GATTTGATAG ACAGATAAAT
TACTGACGTT GATTTTGTTA TTTCATGCAG TTTCAACGAC GTAACCGGAT TTACAAGGAG GAACAGCGCA AAATAAGGGC
TGCTGGCAAG AAAGCCAAGG ATGATGGGGT TGTTAAGGAA CATCATTAGC ACCCCGTTGT CAACATTTTC AATTTAAGCT
CTGAACGATT ATTTTGTTAA AACGTTTGTA ATTTGCTTGG ATCGGTATTC CTGCATATTC TGTCAGCCCA TATTTTAACT
TGAGTTTGCA GACTTCATTT TCCCTGTGCA ATAATCCAGA GATCATCTTG GAACTGCAAG TTAGACCATA AGTTTGCTGA
GTTTCGTAAA TGTCTTTTGA AATGCAAACG TGATGGCTGA TAATTGAAAT CCACGAAATG AAAATATCTA CAGCATACAA
TTTTATTTGG G

>Vigan.04G394200.01
GCAAAGATAG AGAAGGTGGT AGTTTGGTAA TTTAGGGTTG GTAGAAGGGG AAGAGGGTTT GAAGTTGAAA GAAGCAGTGA
GATCAGAGAG CGAGAGAGAA AGAGAGACAA TGGCGTCAGG CTGGGGAATT ACAGGCAACA AAGGTCGGTG CTACGATTTC
TGGATGGATT TCAGCGAATG CATGTCTCGC TGCCGAGAAC CCACGGATTG TGGTCTTCTC CGTGAAGATT ACCTCGAGTG
CCTCCACCAT TCCAAAGAGT TTCAACGACG TAACCGGATT TACAAGGAGG AACAGCGCAA AATAAGGGCT GCTGGCAAGA
AAGCCAAGGA TGATGGGGTT GTTAAGGAAC ATCATTAGCA CCCCGTTGTC AACATTTTCA ATTTAAGCTC TGAACGATTA
TTTTGTTAAA ACGTTTGTAA TTTGCTTGGA TCGGTATTCC TGCATATTCT GTCAGCCCAT ATTTTAACTT GAGTTTGCAG
ACTTCATTTT CCCTGTGCAA TAATCCAGAG ATCATCTTGG AACTGCAAGT TAGACCATAA GTTTGCTGAG TTTCGTAAAT
GTCTTTTGAA ATGCAAACGT GATGGCTGAT AATTGAAATC CACGAAATGA AAATATCTAC AGCATACAAT TTTATTTGGG

>Vigan.04G394200.01
ATGGCGTCAG GCTGGGGAAT TACAGGCAAC AAAGGTCGGT GCTACGATTT CTGGATGGAT TTCAGCGAAT GCATGTCTCG
CTGCCGAGAA CCCACGGATT GTGGTCTTCT CCGTGAAGAT TACCTCGAGT GCCTCCACCA TTCCAAAGAG TTTCAACGAC
GTAACCGGAT TTACAAGGAG GAACAGCGCA AAATAAGGGC TGCTGGCAAG AAAGCCAAGG ATGATGGGGT TGTTAAGGAA
CATCATTAG

>Vigan.04G394200.01
MASGWGITGN KGRCYDFWMD FSECMSRCRE PTDCGLLRED YLECLHHSKE FQRRNRIYKE EQRKIRAAGK KAKDDGVVKE
HH*