GBrowse Details

Vigan.04G088200.01

Basic Information:
Name: Vigan.04G088200.01
Multiple alignment
Variant Information
Position: Chr04:8984423..8989731 (- strand)
Length: 5309
Functional Information:
Description: Similar to uncharacterized LOC101205849. [XP_004165121.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:34.28,39.62,95.23,56.68,126.78,163.53,83.67,61.37
Arabidopsis thaliana homolog: AT4G00585.1
Automatic updates:
Name: NM_001250884 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306629 (LOC100306629), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:8984423..8984818 (- strand)
Length: 396
Type: three_prime_UTR
Position: Chr04:8984819..8984896 (- strand)
Length: 78
Type: CDS
Position: Chr04:8989367..8989543 (- strand)
Length: 177
Type: CDS
Position: Chr04:8989544..8989731 (- strand)
Length: 188
Type: five_prime_UTR

>Vigan.04G088200.01 class=Sequence position=Chr04:8984423..8989731 (- strand)
TGAAGAGAGG GGAGAGTAGC ATAAGGCAGT TAGACACTCC CGCAGGGGAT CTCAGCCTGA ACGAAACGAA ACCTTGGTTC
CTCTCTCTTG TCCTCACAAC TTTGTTCGTG CGTGTATCCC AAAGAGAGAG AGTGAGCGAG TGAGTAGGGT TTCAAATTTT
CAGCCAGACC AAATCGGAAT CGGAAGAAAT GGGCGGTGGA GGCGGTGATC ATGGCCATGG AAACGGCGAT TTCAGGACCA
AGGTGTGGAG TATGACAGGT GGCCCTTACT GTCGTCCCAA ACACTGGAAG CGAAACACTG CCATTGCCAT GTTCGGCGTC
GTCCTCGTCT GCATCCCCAT CGCCATGAAA TCCGCTGAAC TTGAGGTCCC TCTCTCTCTC TCTCTCACAC ACACACACAC
ACACACGCAC ACACCGATCT GGTTCCTCGA TTCGATTTAG TAAACGGATT TTTATATGAT TTTTCACGGC TATATGTTGA
TGATTGATTG ATTGATTGTA TGGATGGTAA TGTATATATT TGCAAACTAT AAGGTTCAAT GAGGCAATAT TATGTTGTCC
CAATAGTGGC TTTATTTCAA TTGAATTTTT CAAATGGTGT TGTGGACTTT TTCTCCGATG TTATTTTTTT TGATTCTATT
GATTCTTGAT TATGTTGCCC CAAGCCCGCA GTGTCGCGAT TTAAGTTATC AATGGTGGCA AATAGTGCTA CTGTCATGCC
GAGGTTGTGT TCATTGGTGT AAGAATGGTG GTGAAATTGT AGCTGAATAT TCTCCATATG CAAACATTTC CTCTCAGCAC
TTTGACTCCT CCATTTTCTG GCTAGGTTCT GATAGCTTGC AATTCTTGCG CAAGTTCACC CCAGTTTGGC CTCACCAATC
ACTTAGCTGG CTGAGCTCAT TTATTTTCTT GCTAGACACT TAATACCTAT CGGTCAATTT ACCGACGTTT TTATTGATAA
TGGGGGTTAA GGAGTTCACC CTTTTTTTCT TAGTTTCAGG AAGACATCAA CCTTGAATAG AGTGCCCTTT TTTAGCCTAA
TATAGTTGCC CAGATTGGCC ATATTTTTTT CCTTTCACCA AAATGGATAT CTCAAACTTA AAAGGATATC ATTTCATATA
GGTCAGTAAA TTTCATCTAT CCTGTAATCC CCTTAACTTT TTTTTCCCCT AAAAGTAGAT AAGGTATACT ATTATTTCTC
TGGGTTACAA AAAGATGCAG AGTTTAAATC AATTTCGAAC AGTGGAGACT GAAAAACGGT AGTGAAAGGC CTTGTTCTGG
CAGGGATTGT GTGTATCGGG GTTGTGCTAC AATCGTTGCA TTGTTCCAAA AGAGTTCCCT CCAAAACAAA TCTGGGGAAG
ATGGGCAGTT GTGTTTCAGT TTGCTGTTGA AAATAACAAC AATCATCGCC ACTACAATTT TTTTTTCCGA AAGAGGAAAC
AAATTAAGCA CTATTGTTTT TATCTTTTGT CACTAGCTTT TGTTATATTT CTCTTTTAAG AAATACAATG CTATTTCCCC
TTAAACAAGG TTGTGATAGG TGGGACATTT TTTCGTAGTT TATGTCAGCA AATGTCATCT GTCCAGTATT CCTCGCAACC
TTTTTCTTTA TTAAAAGAAT ATCATTTTGA CTAATTTTCC TGTGTGGTAT ACAAAGATGC AGTATTTAAA TCAATTCCAA
ATAGTGATGT AGGACTTTGT TCTTCACAGG GATTGTGTGT ATCGGTGTTG TGCTACAATC ATTGCATTAT TCTGAAAGAG
TTCCCTGCAA AACAAATTTG GCCAGTTGTG TTTCAGTTTG CTGTTGAAAA TAACAATAAC ATTTTTTTCT TTCCGAAAGA
GGAAACAAAT TACAAACCTT TTCTTTTTCT GTTGGTGATT TTACTAGCTT TTATTTTATT TTTTTAAGAA ATACAATGCT
TTTTCTCATT TCACAAGGTT GTGCTTAGTT GGATTATATA GTTTATTTCA CTAAATGTCT TCTATCCAGT ATTCCTCTTA
AACCTTTCTT TAATTAAAAG GAGATAATTT AAACTCATTT TCCTGTATGG AATACAAAGA TACAGAGTTT AAATCAATTC
CAAATAGTGA AGTAGGACTT TGTTTTGGGC AGGGATTGTG TGTATCGGTG TTGTGCTACA ATCATTGCAT TATTCCGAAA
GAGTTCCCTG CAAAACAAAT TTGGGGAAGA TGGGCAGTTG TGTTTCAGCT TGCTGTTGAA AATAACAACA ATCATCGCCA
CTACATATTT TTTTTCCTAA AGAGGAAACA AATTACAAAC CTTTTCTTTT TCTGTTGGTG ATTTTGCTAG CTTATATTTT
ATTTTTTTAA GAAATACAAT GTTTTTTCCC ATTTCACAAG GTTGTGTTTA GCTGGACGTT ACTTTATAGT TTGTCAGCAA
ATGTCATCAT CTATCCAGTA TTCCTCTTGA CCTTTTCTTT AATTAAAAGG AAATCATTTA GACTCATTTT CCTGTGTGGT
ATACAAGGAT GCAGAGTTTA AATCAATTCC AAATAGTGAA GTAGGACTTT GTTTTGGGCA GGGATTGTGT TATGGTGTTA
TGCTACAATC ATTGCATTAT TCCGAAAGTG TTCCCTGCAA AATAAATTTG GGGAAGATGG GCAGTTGTGT TTCAGTTTAC
AGTTGAAAAT AGCAACAATC ATCTCCACTA CATTTTATTT TCCGTAAGAG GAAACAATTG TCAAATAATT TTTTTGTCAG
TGAGTTTTTG TATTGTAAGT TGGTGATCTG CTACTATCTT TATTTTAATT TTTTGAGAAA TACATAGCTA TATTCCTGTT
CAAACGGTTG TGCTAAGTTG GACATTATTT CATGGTATAT GTCAAGTATC CTTATTACCT TAACTTTTTC TTCTTTAAAA
GAATACGAGT TAGACTACTT TCTGTGTGGT ATGCAAAAAA GTGTTGTTTA AATCAATTCC AAAAGGTGTA GGATGATAAA
CTGGGGTGGA GTAAGGCCCT GTTGTTTTGG TGGGGATTTT GTGTAACAGT GTTGTGCTGT CATATTTTGC ATTACCCTGG
AAGAGTTCCC TGAAAAAAAA ATTTGGGGAA GATGGGCAGT TTTGTTTCAC TTTGATGTGA AAATAACAAC AATCATCTCC
CTCACATTTT TTTTTCAACA TGGAGCACAT TTCCTTTTTC TTTTGGTGAT TCTACTGCTA GCTTTAATTA TGTTATTTAG
TTTTCTAAAA GGCATATGTT GCTATATTCT TTTCCACAAG GTTGTGCTAA GTTTCTTAGG CGTGAGACTG GTAACATCAC
TTAAAGTATA ATGTTAAACT TGTTAGCGAT AACTATTTAC TATATGTTGC TAAACTTATT ATTAGTTGTA GAAATTGTTG
GCTTTATGTA ATGGATATAG ACTCTGAATA CAAGATATTG TATGGTAAAT GCATTATGAT AATGATATGA TACAAAATAT
GAAACACTAG TTTCTATAGG AATTCAGACT CATAAATCAG ATAATGAAGC AAAATAAGAA ATAAAAAGAA ATATGAGAAC
CATCATGGGA GATAATTTAA GATGGTCTAA TTTTTTTTTT TCTAGATACT ATCAAGATAT TGTGTAACAT TTTGTAAATA
TTCTAACCAT GGTTGTCAAA ATTGTAGACC CTTCCTTGGA TTAGACGTCG GGTAGAAATT TAGAATTTGA GATCATAATT
CAAGACAAGA TGTAAAATTA TATTTTAGAA TATATACACA TAAAATAATG CAAATAAGAT AGTAGTAAGA CGATGACAAT
GATGAGTAAT TTCTAAATGC TTTTGCAATA CTTTCGTGGG AAACTGTTGT TAACTCCTTT GATTTTGGGG AATATTTAAG
ATGTGTGCAC AAGATAAGGA TAGAAGTGAG GGATGGAGAT AATCATACAT GGTGTCACAT ACGGTTTCAA TTATTTCTTG
TGCTCGAATA ATGGAACTAT AAAATATATT TTTTTGTTAA AACTTTAAAC TTTCAAAACA GTAGGAGCAC CAGCACAAGT
AGGGGTACTA GTACTGCAGG TGCACTACAA CCAATCTGAA GGAGCATTAG CATTTTCGAT GACATTTTCC AACAGCAAAC
AGCTTAAGCT ACCAATCAGA AGCAACACTC AAACTTTCCC TAGTCAGAGA CAAAGCCTAT AAGATTCCAC AAACTAACTA
TAAAGTAGGG CTTTGTCCTG AGCAGGTATT CTGTGTTCCT GATCAGAGAA CAACAGCCTG AAAAACATAT TTGGGGGAGG
TGAAGGTTAA TATTAATTAG CATAGCCTGA TACTGTGACT TTCAAGATGC TATGGTTAAC TCTATAATTG ACAGACAATT
GGATGTGTAC TTTTTGTCTT GACCACTTTC ATTTGGATGC TTTTTGGGCA TCAAATACTT TGAAATTATT GAGCATATAA
ACCGTGTTTG ATAGTTACAT ACTATGGAGC ATATTTTGTC CATTATTTAG ATCTTATGCC TCTGGTTCTA GATTTATGCG
CATATAAAAT TAATATTTTG CGTTTGCATC AACCTGATTA ATTTCCTATG GTTTAGTTTG ATATGCCTGA GTAGATGATT
GATTTGAATT TCTATTATGT AAGTGGTGGA AGAATCTGGT TCAACCTTTT TTAGTTGCTG TTCTTTATTT CTGTAAATGT
GAGGGTAGGG TGGGTGAGTC TTGGCACAGA TTAATTATTT TCTCGAGTTG ACCTTGCTGG GATGATGCTA TATGGTGTAC
TCATTTTTTT TTCTACTTTA TTCATTTCTT ATAATTTGTT CTTTTATGTT TGCTCGTAAC CTTGACTATA TGACTGTATG
GATTGGCTAA GAATTTTTTT TTTTTTATCT TTCAGCAACG ACCGCATCAT CCTGTTCGCC CCATCCCTTC TCAACTCTGG
TGCAAGAACT TTGGAACTAA AGATTATGAA TGAACGGAAT AACAATTGCA TCACTGGTGT GGGAGTCCAC ATCATGTCAA
GCAAACATTA TTTGTTATAT GCTCTAAGAA TATGAACAGC CTTAAAGAGT TGCTGTTGTT GATGTTATCC AAGACTTTGA
TCTAGCATCA AGTAGTGACA TTATTTTTTG GCTATATTTG ATGGACATCC ATTTTAGAAA TTATGAAATT AAATAAGTGC
TATTTTCTGA AGTTTTGATT CGAGAGCCTG TTGAAACCGA TATTACTCGT TACTGTAATA ATTGTAATTG TGCTTTTATC
AATTTGCCTA TACCTTCTCG CATTAGTTCT TTCCCCATTT AAATGCCATG TAGAAAAAGA GAAAGTAGAA TTTTATGTTT
TTAATGGAAA AGTTGAAGTT ATTCCAACC

>Vigan.04G088200.01
TGAAGAGAGG GGAGAGTAGC ATAAGGCAGT TAGACACTCC CGCAGGGGAT CTCAGCCTGA ACGAAACGAA ACCTTGGTTC
CTCTCTCTTG TCCTCACAAC TTTGTTCGTG CGTGTATCCC AAAGAGAGAG AGTGAGCGAG TGAGTAGGGT TTCAAATTTT
CAGCCAGACC AAATCGGAAT CGGAAGAAAT GGGCGGTGGA GGCGGTGATC ATGGCCATGG AAACGGCGAT TTCAGGACCA
AGGTGTGGAG TATGACAGGT GGCCCTTACT GTCGTCCCAA ACACTGGAAG CGAAACACTG CCATTGCCAT GTTCGGCGTC
GTCCTCGTCT GCATCCCCAT CGCCATGAAA TCCGCTGAAC TTGAGCAACG ACCGCATCAT CCTGTTCGCC CCATCCCTTC
TCAACTCTGG TGCAAGAACT TTGGAACTAA AGATTATGAA TGAACGGAAT AACAATTGCA TCACTGGTGT GGGAGTCCAC
ATCATGTCAA GCAAACATTA TTTGTTATAT GCTCTAAGAA TATGAACAGC CTTAAAGAGT TGCTGTTGTT GATGTTATCC
AAGACTTTGA TCTAGCATCA AGTAGTGACA TTATTTTTTG GCTATATTTG ATGGACATCC ATTTTAGAAA TTATGAAATT
AAATAAGTGC TATTTTCTGA AGTTTTGATT CGAGAGCCTG TTGAAACCGA TATTACTCGT TACTGTAATA ATTGTAATTG
TGCTTTTATC AATTTGCCTA TACCTTCTCG CATTAGTTCT TTCCCCATTT AAATGCCATG TAGAAAAAGA GAAAGTAGAA
TTTTATGTTT TTAATGGAAA AGTTGAAGTT ATTCCAACC

>Vigan.04G088200.01
ATGGGCGGTG GAGGCGGTGA TCATGGCCAT GGAAACGGCG ATTTCAGGAC CAAGGTGTGG AGTATGACAG GTGGCCCTTA
CTGTCGTCCC AAACACTGGA AGCGAAACAC TGCCATTGCC ATGTTCGGCG TCGTCCTCGT CTGCATCCCC ATCGCCATGA
AATCCGCTGA ACTTGAGCAA CGACCGCATC ATCCTGTTCG CCCCATCCCT TCTCAACTCT GGTGCAAGAA CTTTGGAACT
AAAGATTATG AATGA

>Vigan.04G088200.01
MGGGGGDHGH GNGDFRTKVW SMTGGPYCRP KHWKRNTAIA MFGVVLVCIP IAMKSAELEQ RPHHPVRPIP SQLWCKNFGT
KDYE*