GBrowse Details

Vigan.04G045600.01

Basic Information:
Name: Vigan.04G045600.01
Multiple alignment
Variant Information
Position: Chr04:4134819..4140227 (+ strand)
Length: 5409
Functional Information:
Description: Similar to Uncharacterized protein. [I1N4H1, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: DNA-binding WRKY (IPR003657)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:120.93,45.74,17.02,28.05,14.06,15.77,10.07,11.84
Arabidopsis thaliana homolog: AT1G13960.1
Automatic updates:
Name: BK005842 NCBI(nuccore)
Organism: Glycine max
Description: TPA_inf: Glycine max transcription factor WRKY4 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: EU375355 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor (WRKY4) mRNA, complete cds.
PubMed ID: 18384508 NCBI(pubmed)
Status: Known Variant
Name: NM_001250726 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor (WRKY4), mRNA.
PubMed ID: 18384508 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:4134819..4134918 (+ strand)
Length: 100
Type: five_prime_UTR
Position: Chr04:4134919..4135305 (+ strand)
Length: 387
Type: CDS
Position: Chr04:4136337..4137064 (+ strand)
Length: 728
Type: CDS
Position: Chr04:4137150..4137308 (+ strand)
Length: 159
Type: CDS
Position: Chr04:4139583..4139865 (+ strand)
Length: 283
Type: CDS
Position: Chr04:4139866..4140227 (+ strand)
Length: 362
Type: three_prime_UTR

>Vigan.04G045600.01 class=Sequence position=Chr04:4134819..4140227 (+ strand)
AGAGAAGATA ACAACACAAA ACGAAACCCA TAGTTTCGTG CCTTTCTCGC ACTATCTATC CATTTTATTT TCTCTTCCAT
AATTTTCTCA CCCACCACCC ATGTCCACTC CCAACGCCGA CTCCGGCATG GCGCCGCATC CGCGCCCCAC CATCACACTT
CCTCCTCGTC CCTCCGCGGA GGCCTTTTTC TCCGCCGCTG GCGGCGCTAG CCCCGGTCCC ATGACCCTCG TCTCCAGCTT
CTTCGGTTCT GATGCCGCCG CCGACTGTCG CTCCTTCTCC CAGCTTCTTG CTGGCGCCAT GGCCTCCCCG ATGGCCTTCT
CTGCCACCGT GGCCGACAAC TCCGACAAGG ACGATGATGG GCCCCACAAG GGCTTCAAGC AGAGCAGACC CATGAATTTG
GTCATTGCTC GTTCCCCTGT CTTCACTGTT CCACCCGGGT TGAGCCCTTC TGGGTTTCTT AACTCTCCTG GCTTCTTTTC
CCCTCAGGTG ATTAATTTCA TTAGTGATAG CGCTTCCTGA AGGTGGTTGT GAGGATGAAT TTCAGAAGGG TTGTGGTGTT
TTTGTGAAGA TGTGGTTTTT TTGAAAGAAG GGTGTGGGAT CGGTTGATGG GTATGGGGGA TTGGAGTTTG GTGTTTTTGG
GGTTATCAGT GTCTTTGTAG GAACGTGCTT GTGGACTGTG ATTGTAGTAT AGTACTCTCC ACAGTTCAGA TTTGATCTGG
ATTTTATTAC AATTGTATTG TGCCGTGTGT TATGTTTTCA GTGGACTACT TCACTAGTGC GAAGGATTTC TGGGTTGTGG
AGTTGTATGT GTGGATTTTC AGACAAGGGG TGGATTTTTT AGCGCATTCA ACTGCGTGAA AAATATTGAT TTGGAGTAAT
ACGATTACGA AGTTGGTGTT GTTGGATGGG TTGCTCTAGT GAAGCCAGTG GGATTTAGAT CACACTTTTT CAAAATGTCA
AAAGTTTTAG AGGTATTGTG TCAAAGTAAA ATGGTTTTTG GTTGCATTAC CCTGATTCGT TAGTGATAAT TCTGATATGG
TTTTTTTGGC AATAACCGAA AATGAAGACA AAATTCGTGG CTGAAAAATG CGATCTCCGT GAGTCACTCG ACAGTGAAAA
TAATCGAGAT ATTTTCGTTG TCCATGTCTA TGTTGACTAA GAAACTCAAT GATTGGATAC ATTTGTCTTC TATTAAGGGC
TGTTTTAGCT TTGCATTCTA CTTGTTCATT ACTACATGGT AAAGATATCA TAAATGTTGT TGAAGATTCG TTTTGCCCTT
AAAAATTTGT CTCTTTTATT TCTGGAATAC TGTGCATGGT TATGTATGCA TTCTATTACA CATTTTGCTG GTCCTGCTGT
TGGGATGTTT ATTCATCATC ATTATTATTA TTGTTATTAT TATTATTATT ATTATTATTA TTATTATTAT TATTATTATT
TAATGTGATA TTTTTGCCTT GGGATGGTGG ATATGCTTGT CGGAGGTTCT CACCATCTCT TCAATTTGAT GTATACAGAG
CCCCTTTGGG ATGTCTCACC AACAGGCTTT AGCACAGGTT ACAGCTCAAG CTGTCCTAGC GCAATCTCAT ATGCACATGC
AAGCTGATTA CCAGATGCAT CCAGTAACTG CCCCTACTGA ACCACCTGTA CAACAGCCAT CTTTTGCTCT AAATGAAGCT
TCAGAGCAGA AAATAGTTCC ATCTGTATCA GAAGCTAAAA ATGCTCAACT GGAAACGTCG GATATCTCAC AGGCTGATAA
GAAATATCAG CTGGCTTCTC AGGCCATTGA CAAGCCTGCA GATGATGGCT ACAACTGGCG CAAGTATGGG CAGAAGCAGG
TTAAAGGCAG CGAGTATCCA AGGAGCTACT ACAAATGTAC ACATCTGAAT TGCCTAGTGA AGAAAAAAGT TGAGCGTGCC
CCTGATGGAC ACATAACTGA AATTATATAT AAAGGTCAGC ATAACCATGA AAAGCCTCAG GCAAATAGAC GTGTCAAGGA
TAATAGTGAT TCAAATGGAA GTGCAATTGT TCAGCCTAAG TCTGAGTCAA ACTCACAAGG TTGGGTTGGA CAACAAGTAA
ACAAGTTTAG TGAAAACATT CCTGATTGTT CAGTTCCTGA AAGTGACCAG ATCTCCAATC AAGGGGCACC TAGGCAACTA
CTACCTGGGT CAAGTGGGAG CGAGGAAGTG GGTGATGTAG ATAATAGGGA AGAGGCGGAT GACATTGAGC CAAACCCTAA
GAGAAGGCAA GTTTAGTCAT GTTGATCCTT TATCATAGAG CTATGCACCT CTATAATTCT TCTCAATATA GGCTAAATTT
CTACTTTTCA GGAATACTGA TGTTGCGGTT TCTGAAGTAC CTCTTTCTCA GAAGACTGTC ACAGAACCCA AAATTATTGT
GCAAACAAGA AGCGAAGTTG ATCTTTTGGA TGATGGTTAC AGGTGGAGAA AGTATGGTCA AAAAGTGGTG AAGGGAAATC
CTCATCCGAG GTGATTCTTT AACTCTTTGC TACAATATAT CTTCTAAAAG ACTTGTATGT CCATATTTCT CAAAACTTCA
GAATGTGTTT AATTCTCAAC AGTATATCAC ATTGGAATTA TGTAACTAAT TGTATAAAGT TTGATTACCT TAATAGATAT
GATATTAATC ATAGATACAA GAATCCTTGA TTAGTTTTTC TGTTTCTTTT GAATTCTACT ATAAAAATAT CGAAGTCAAA
TTAATTAGCA AGCATGAATT TTTATGGTAT AAGGTGAATA AGTGCAACCC AGTTTTAAGA AGTTTAGGTT TGCTTTTGCT
TACATGAAAT CCAGTCTGTG CTAAGTGTGT ATAATGTGTG GTAACTTGTA CTGTGAAATG ACTTTCTCTA TTTGTATATT
ATGCATTCAC TTTAGTTGTT TTTAAATGGG TACTATGTTC CTGAACAAAT ATAACACAAT AGGTATGTCT TTGCAAAACT
TCTAAATTTT ATGCTAGGGT TATTCGTCTA ATATAACAAC TTTACTCTCA GTGTAATTTC TGAAACTTAA AAGGGAGTTT
GCATGTGTTT CTTATACCTC AAGGAGGTTA ATGTAAAATA TACTCACAGA CAAATCTGTG TTGATTGATA CTACCTCTTT
CAAAAATATC ATTTTGTTTT GGATTATGAA CATCTTAAAT AAAGTGTATT TGATAATTTG ACAATATTTC CCTTGTACTT
TTTGATGTTT TGCTATCATT TCATTCAGTG GGAGATCTCA AGAAATAAGG ATGAAGTTAG AGAAATTAAT AGACATCTTC
GTAGTTTCCT AAAGTAACAG ATAAAATGAA ACGAAATTTC TTCTGTAAGA CTACTATTAT TGTGAGAAGG AGTATTATCT
TTCCGTCTTA CTGCTAAATT AACTTCACGT GCTTTTAGTT TTCTTCATAT TGTGTATTAT AAGTATTCGC TTAGAAATTT
GCTTTCGCCT ATCCTTGATT TCTGGCTTTT CATTTCTCTG TACAAATGAT TTTCTGTGTC GGAATGTCTG CTTCTGCTTC
CAGATTCGAT TATAGAATTT TATCTGTCAG CTTCTATAAG TAATATGATT GGGGACTACA ACCCCAAATG TTGTGCTTGA
CAAATTTTTA CTGGAAATTT GGGAGAAGCT TGACATTTTA TCTCGACGGT GGAGACTAAT AGCCACCAGG AATAAGTATA
TTATGTTTGT CACTTTTCAT ATTATTTTCA AGTCTTTCTT TAAATGAATC TAGTTAGTGG TACATTTGAT GGGAAATTTG
GAATGCAATA TGCAACGTAT TTTAGTTGTT AATTCAGTTT CTATCCAATT TTTTAAATTT AAAATTAGAG AACTTTGTTG
TTTCATCTTA TAATTTAATT AAAAAAAAAC TAAATTATCT TGTTACACAA AGAGTTCTAT TTATTTTCAC ATTATGTGTG
CTCCTTTGAT TCTAAAGTGT TTTCACTTTT TTTTTTCTGT ACTCTTGTAT TTATATTCTT ACCTGGGAGA ATCTGCTGTG
TTTCCCCATC TACATGGATG TTATTGAAAC TTTTGCTGTT GTTTCTCGCA GCATTAGTCA GCGATCTGAT TATCAGCACC
ACTTCAACTG TGTGATTAGT CTCTGAATTT CTGTATTCAT TATAGCAGTT TTTTTTTACC ATGAGATAAT CGTAACATCA
AGATTCAAGT TTTGTTCCTG TGCCCTCAAC CCTCACTGAA ATGTATGATG TTCGATAGAA AATGTTTCTT TCTCTTGTTT
CCTTGAAGCC AGTGTGTTCT CATCTTTTGA TGCATAACTG TTACCCTTAG ATATACAGTT AGGACATGGA GGGTTTATGA
AAGGAGAAAG ATAATAGAGA ATAAAGATGA GTACTTAACT GTTGAGCAGT TAAGGGGACG GGAAAAGGTC TATAAAAAGG
ACCTCTTTTG TAGTTACGGG TAGACAGTTT TTACCTTTGA GTTTGTAGAC CGGTTCAGAC CTGGTGAAGG AGGTTAAGCT
CCTGGGTTTC CAGTTGTATT CTTGATTCTT TGATATGAAT AAAATTCAAT TCATTACCAT TTCTTGTTGT GAAATTGATT
GAAGTGTGCG AGTGAGGGAG ATAGTTAGGA TTCTTACCCA GATTCCTAAC ATATACACAC TTACTTTTGT CAATATATAT
GAGGAGACAG TCACTCATTC TTTCAATCTG AATACAATTC GATAACCAGT GTTGTTTATA AGCCTTGAAT GTATTATGTT
TTGTAGTACT TTTAACTTGT CTGGTACTGA ATTTGTATGG GCAGGAGTTA TTACAAATGC ACAAGTGCAG GATGCAACGT
GCGTAAGCAT GTTGAGAGAG CTTCAACCGA CCCCAAAGCT GTCATAACCA CGTACGAGGG TAAGCATAAT CATGATGTGC
CTGCTGCTAG AAATAGCAGC CACAACACAG CTAATACAAA TTCAGTGCCA TTAAAACCGC ACAATGTCGT ACCGGAGAAG
CACCCTTTAC TTAAAGACAT GGATTTTGGA AGCAATGACC AAAGGCCTGT ACATTTGCGC TTAAAAGAAG AGCAAATCAT
AGTATAAAAG TGTGGCGTCG TGATTACTCA TTCCACCTAA AGTACAGAAT GAAGTTGTCT AGAAGATGAA ATGGATAATA
CAAAGGTGTA GTCACTAGTC AGTTGGCAAT GGTCAGTGCA TGTTTATTGT TTTCTATTTT CACTGTATGT AACACCTTTT
GTACATCTAA ATTATGGAAT TGGTTGTATA AGATATCGTT TACAGGTATG AAGATCATTT AAGCTAATGT ACGAACATTA
TTATATAATT TATAAAATAC TCCTTGTAAG CTGTAAGGCA GTTCTAGAGA GTACAAATAA TTGGAATGCT TGTACTGAAT
TCCTTTTTAT ATGTTATGGA AGTTTAAAGA ATGACTTTGA TAACTCCAA

>Vigan.04G045600.01
AGAGAAGATA ACAACACAAA ACGAAACCCA TAGTTTCGTG CCTTTCTCGC ACTATCTATC CATTTTATTT TCTCTTCCAT
AATTTTCTCA CCCACCACCC ATGTCCACTC CCAACGCCGA CTCCGGCATG GCGCCGCATC CGCGCCCCAC CATCACACTT
CCTCCTCGTC CCTCCGCGGA GGCCTTTTTC TCCGCCGCTG GCGGCGCTAG CCCCGGTCCC ATGACCCTCG TCTCCAGCTT
CTTCGGTTCT GATGCCGCCG CCGACTGTCG CTCCTTCTCC CAGCTTCTTG CTGGCGCCAT GGCCTCCCCG ATGGCCTTCT
CTGCCACCGT GGCCGACAAC TCCGACAAGG ACGATGATGG GCCCCACAAG GGCTTCAAGC AGAGCAGACC CATGAATTTG
GTCATTGCTC GTTCCCCTGT CTTCACTGTT CCACCCGGGT TGAGCCCTTC TGGGTTTCTT AACTCTCCTG GCTTCTTTTC
CCCTCAGAGC CCCTTTGGGA TGTCTCACCA ACAGGCTTTA GCACAGGTTA CAGCTCAAGC TGTCCTAGCG CAATCTCATA
TGCACATGCA AGCTGATTAC CAGATGCATC CAGTAACTGC CCCTACTGAA CCACCTGTAC AACAGCCATC TTTTGCTCTA
AATGAAGCTT CAGAGCAGAA AATAGTTCCA TCTGTATCAG AAGCTAAAAA TGCTCAACTG GAAACGTCGG ATATCTCACA
GGCTGATAAG AAATATCAGC TGGCTTCTCA GGCCATTGAC AAGCCTGCAG ATGATGGCTA CAACTGGCGC AAGTATGGGC
AGAAGCAGGT TAAAGGCAGC GAGTATCCAA GGAGCTACTA CAAATGTACA CATCTGAATT GCCTAGTGAA GAAAAAAGTT
GAGCGTGCCC CTGATGGACA CATAACTGAA ATTATATATA AAGGTCAGCA TAACCATGAA AAGCCTCAGG CAAATAGACG
TGTCAAGGAT AATAGTGATT CAAATGGAAG TGCAATTGTT CAGCCTAAGT CTGAGTCAAA CTCACAAGGT TGGGTTGGAC
AACAAGTAAA CAAGTTTAGT GAAAACATTC CTGATTGTTC AGTTCCTGAA AGTGACCAGA TCTCCAATCA AGGGGCACCT
AGGCAACTAC TACCTGGGTC AAGTGGGAGC GAGGAAGTGG GTGATGTAGA TAATAGGGAA GAGGCGGATG ACATTGAGCC
AAACCCTAAG AGAAGGAATA CTGATGTTGC GGTTTCTGAA GTACCTCTTT CTCAGAAGAC TGTCACAGAA CCCAAAATTA
TTGTGCAAAC AAGAAGCGAA GTTGATCTTT TGGATGATGG TTACAGGTGG AGAAAGTATG GTCAAAAAGT GGTGAAGGGA
AATCCTCATC CGAGGAGTTA TTACAAATGC ACAAGTGCAG GATGCAACGT GCGTAAGCAT GTTGAGAGAG CTTCAACCGA
CCCCAAAGCT GTCATAACCA CGTACGAGGG TAAGCATAAT CATGATGTGC CTGCTGCTAG AAATAGCAGC CACAACACAG
CTAATACAAA TTCAGTGCCA TTAAAACCGC ACAATGTCGT ACCGGAGAAG CACCCTTTAC TTAAAGACAT GGATTTTGGA
AGCAATGACC AAAGGCCTGT ACATTTGCGC TTAAAAGAAG AGCAAATCAT AGTATAAAAG TGTGGCGTCG TGATTACTCA
TTCCACCTAA AGTACAGAAT GAAGTTGTCT AGAAGATGAA ATGGATAATA CAAAGGTGTA GTCACTAGTC AGTTGGCAAT
GGTCAGTGCA TGTTTATTGT TTTCTATTTT CACTGTATGT AACACCTTTT GTACATCTAA ATTATGGAAT TGGTTGTATA
AGATATCGTT TACAGGTATG AAGATCATTT AAGCTAATGT ACGAACATTA TTATATAATT TATAAAATAC TCCTTGTAAG
CTGTAAGGCA GTTCTAGAGA GTACAAATAA TTGGAATGCT TGTACTGAAT TCCTTTTTAT ATGTTATGGA AGTTTAAAGA
ATGACTTTGA TAACTCCAA

>Vigan.04G045600.01
ATGTCCACTC CCAACGCCGA CTCCGGCATG GCGCCGCATC CGCGCCCCAC CATCACACTT CCTCCTCGTC CCTCCGCGGA
GGCCTTTTTC TCCGCCGCTG GCGGCGCTAG CCCCGGTCCC ATGACCCTCG TCTCCAGCTT CTTCGGTTCT GATGCCGCCG
CCGACTGTCG CTCCTTCTCC CAGCTTCTTG CTGGCGCCAT GGCCTCCCCG ATGGCCTTCT CTGCCACCGT GGCCGACAAC
TCCGACAAGG ACGATGATGG GCCCCACAAG GGCTTCAAGC AGAGCAGACC CATGAATTTG GTCATTGCTC GTTCCCCTGT
CTTCACTGTT CCACCCGGGT TGAGCCCTTC TGGGTTTCTT AACTCTCCTG GCTTCTTTTC CCCTCAGAGC CCCTTTGGGA
TGTCTCACCA ACAGGCTTTA GCACAGGTTA CAGCTCAAGC TGTCCTAGCG CAATCTCATA TGCACATGCA AGCTGATTAC
CAGATGCATC CAGTAACTGC CCCTACTGAA CCACCTGTAC AACAGCCATC TTTTGCTCTA AATGAAGCTT CAGAGCAGAA
AATAGTTCCA TCTGTATCAG AAGCTAAAAA TGCTCAACTG GAAACGTCGG ATATCTCACA GGCTGATAAG AAATATCAGC
TGGCTTCTCA GGCCATTGAC AAGCCTGCAG ATGATGGCTA CAACTGGCGC AAGTATGGGC AGAAGCAGGT TAAAGGCAGC
GAGTATCCAA GGAGCTACTA CAAATGTACA CATCTGAATT GCCTAGTGAA GAAAAAAGTT GAGCGTGCCC CTGATGGACA
CATAACTGAA ATTATATATA AAGGTCAGCA TAACCATGAA AAGCCTCAGG CAAATAGACG TGTCAAGGAT AATAGTGATT
CAAATGGAAG TGCAATTGTT CAGCCTAAGT CTGAGTCAAA CTCACAAGGT TGGGTTGGAC AACAAGTAAA CAAGTTTAGT
GAAAACATTC CTGATTGTTC AGTTCCTGAA AGTGACCAGA TCTCCAATCA AGGGGCACCT AGGCAACTAC TACCTGGGTC
AAGTGGGAGC GAGGAAGTGG GTGATGTAGA TAATAGGGAA GAGGCGGATG ACATTGAGCC AAACCCTAAG AGAAGGAATA
CTGATGTTGC GGTTTCTGAA GTACCTCTTT CTCAGAAGAC TGTCACAGAA CCCAAAATTA TTGTGCAAAC AAGAAGCGAA
GTTGATCTTT TGGATGATGG TTACAGGTGG AGAAAGTATG GTCAAAAAGT GGTGAAGGGA AATCCTCATC CGAGGAGTTA
TTACAAATGC ACAAGTGCAG GATGCAACGT GCGTAAGCAT GTTGAGAGAG CTTCAACCGA CCCCAAAGCT GTCATAACCA
CGTACGAGGG TAAGCATAAT CATGATGTGC CTGCTGCTAG AAATAGCAGC CACAACACAG CTAATACAAA TTCAGTGCCA
TTAAAACCGC ACAATGTCGT ACCGGAGAAG CACCCTTTAC TTAAAGACAT GGATTTTGGA AGCAATGACC AAAGGCCTGT
ACATTTGCGC TTAAAAGAAG AGCAAATCAT AGTATAA

>Vigan.04G045600.01
MSTPNADSGM APHPRPTITL PPRPSAEAFF SAAGGASPGP MTLVSSFFGS DAAADCRSFS QLLAGAMASP MAFSATVADN
SDKDDDGPHK GFKQSRPMNL VIARSPVFTV PPGLSPSGFL NSPGFFSPQS PFGMSHQQAL AQVTAQAVLA QSHMHMQADY
QMHPVTAPTE PPVQQPSFAL NEASEQKIVP SVSEAKNAQL ETSDISQADK KYQLASQAID KPADDGYNWR KYGQKQVKGS
EYPRSYYKCT HLNCLVKKKV ERAPDGHITE IIYKGQHNHE KPQANRRVKD NSDSNGSAIV QPKSESNSQG WVGQQVNKFS
ENIPDCSVPE SDQISNQGAP RQLLPGSSGS EEVGDVDNRE EADDIEPNPK RRNTDVAVSE VPLSQKTVTE PKIIVQTRSE
VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TSAGCNVRKH VERASTDPKA VITTYEGKHN HDVPAARNSS HNTANTNSVP
LKPHNVVPEK HPLLKDMDFG SNDQRPVHLR LKEEQIIV*