GBrowse Details

Vigan.03G092400.01

Basic Information:
Name: Vigan.03G092400.01
Multiple alignment
Variant Information
Position: Chr03:9302883..9309454 (- strand)
Length: 6572
Functional Information:
Description: Similar to fructokinase-4-like. [XP_004490806.1, Cicer arietinum]
GO: Biological Process: D-ribose metabolic process (GO:0006014)
Molecular Function: ribokinase activity (GO:0004747)
Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773)
InterPro: Ribokinase (IPR002139)
Carbohydrate/puine kinase, PfkB, conserved site (IPR002173)
Carbohydrate kinase PfkB (IPR011611)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.84,4.18,14.73,25.50,4.96,10.66,5.04,9.74
Arabidopsis thaliana homolog: AT1G66430.1
Automatic updates:
Name: NM_001253216 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative fructokinase-5-like (LOC100797023), mRNA; nuclear gene for chloroplast product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:9302883..9303112 (- strand)
Length: 230
Type: three_prime_UTR
Position: Chr03:9303113..9303247 (- strand)
Length: 135
Type: CDS
Position: Chr03:9303850..9303966 (- strand)
Length: 117
Type: CDS
Position: Chr03:9304623..9304760 (- strand)
Length: 138
Type: CDS
Position: Chr03:9304853..9305050 (- strand)
Length: 198
Type: CDS
Position: Chr03:9305365..9305577 (- strand)
Length: 213
Type: CDS
Position: Chr03:9308238..9308446 (- strand)
Length: 209
Type: CDS
Position: Chr03:9309002..9309143 (- strand)
Length: 142
Type: CDS
Position: Chr03:9309144..9309454 (- strand)
Length: 311
Type: five_prime_UTR

>Vigan.03G092400.01 class=Sequence position=Chr03:9302883..9309454 (- strand)
GTCAGCAATA AGCAGTTCAA AACGTGCAGA TGCTTATGAA TCTTTCTATT GTCTGATAAA CAAATAAATA ATAAAAAAAG
CAGCAGAGAA ATTGCACATA TCGTGCATTC TGTTTCCTTT GCTTACTCCG CAACACAACG TAACCCAGAT TTCGTCCATT
CCAAAGGCAA TTTTCACACA AACCCCATCA ATTATCTTGC TCACATTCCA AATTCAGAAA AAATATTCAA TTTCGGTTGA
TAAAGAGAGA AAAGAAACGA ATTTCAAGAG CCAAGTCCTT GAGGGGTGTT TAGTAGTGAT TTCCTTGTTT GATGGCTCTT
CACTGTGGCG TTTTCAGCTT CAGGAGTGTA GCTTCTCACC CTCTATGTTC TGTCAAGTTC AGTCAGCCCA CTGTCCAAGC
TTCCACCTTT GCTTCCCCTC TTACCCCTCC TACTGCCAAA TTGAATGTCA GAGGTAATCC AAATTATGGG TCTTCATTAA
ATCTTAGTTT TAATGCATGC TATGAAGAAG AGCAACTGTT TTCTGTTCTG TTTGAACCTT TGCAATGTTT TCGAATATGC
TTGTTGCAAT TAGGGGAGGG TGCAGTTTGT GCTATCAATA TGAGTTGTGT ACATGTGAGC TTTTAGGTGT CTTTGGATAA
TAAACTTAAG ACCTTATTTA GTAATCTTTT CTCTGATAAA TAATTAAGGC AAGAAACTAA TAAGCATGCA TTGTCAATTT
AAAAGTCTTT CATTATTAAC AAAAAAAAGT CCGTGCTTGA ATTTAAAAAC AGTTATTATA AGAATCAATA ATTTTGTTGG
TTTTTTTATT AGTTAATAGT GTAGAAAACA TAAAAATGTT CTTAAAATAA GCTTAAGATG TTAGTGATAG CCATTAAACT
ATTTTCGTAA GTGCAAATAA GCTTGCAGAA CCTCATTCAA AGTCGTCCTT GTTTAAAAGA TCTTGTTATC TAGGGGTATC
AAGTTATGAT ATGAATGCAT TTTCACTACT CAACTTTTCT TTGTACAGGA AAGGCTGTTC CTGGTGATGG GACACCTGAA
ACAAAGGAAT CACCTCTTGT GGTTTGTTTT GGGGAAATGC TCATTGATTT TGTCCCAACT GTCAGTGGCC TTTCTTTGGC
TGAAGCACCT GCGTTTAAAA AGGCTCCTGG AGGTGCCCCT GCTAATGTTG CAGTAGGCAT ATCTCGATTA GGGGGTTCAT
CAGCTTTCAT TGGAAAGGTA TTATATAGGT ACTTCTCTAG GTTGTTTCTA TACTTCTGTT ATAGGAAGCA TCATATTTAC
TTGTTCGCTT TGGCATACTG CCAATATTGT CTTTGCTAGC AAACTTGATA TTGTCCCGGC ATCCTTATCC CTGTGCTGTC
AAACTTTAGG CTTGTAATGT TAATCAGCAT GTTTGTTACA TAATCAGATT TTATGAAGAA ATAGATGATA AGGTTAATCA
ATAGTTAACT CCTATTTTGG TCCTTGAAAT AGTTAACAAA TTGGTCCCTA CAAGATTTGT GTCATTTATT AGTCCCTCCA
TAGTGAAAGT ATCCACCACA TAAGTTTCTG TTAGTCTCCA GAAACAATAA TGAATTCTGA AGTGATCTAT TAATTTCTAA
GATGGCTTGT TAATGTCATC TAAGCATTTG TATGACAACA CCATCTAGGC TTTCACTTGG TACGCATGTT GGCAAAATGA
TAAATTAGTA TGATGGGATG TCAAATTTTA AGGAAAGGAA TTCAAGTCTG GCATGTGAAC CTTTGAGTGG CAAAAACATG
GGTTAACCCT TTTCTTGACT CACAATACTA CTGTAAAGTA CCCGGGCAGT GTGAAAGGTT TTGGGCATTC GAGTTCTTTT
TGGGTGGCTC GCAAGCTCTG TACTTTTGGG GATTCAGTCT CTATTATATA ATGGTGTGTG GGTGTGGATA GTTTCTAGGC
CTAATTGTTC ATGGAAACGA GTGAAAAACA GTATGTGGTG GTACCACATT GTGGAATGGT GACCTAAGCA AGTGGTAGTT
AATTTTTTTC AGGTGGCTTG ATGCTGGCTT TTGGTTGTTG CTTAGTCGGT TTGGTTAACT TGGGTGGAAT TCCTGTTTAG
GTATTACTGA GTAATGTATT TCATAGAAGT TTGTGTGTCT CTTTGTAATG AACAAAATAC CATTGCCTAC TCAGGCATAA
TCAAGAGAGA AAAATTTCTA ACTGCACTAT GGTATTAATC AGCGATCTGA AGCGTACTGG CACATAGATA AAACCGTTAG
TTAAGCCTCA TTTTTGTCCC GCAAAGATTC ACATGTCATC ACTTTGTATA AGCATCAAAT CTGCCTGTCT CAGTTTCCTA
CACCATCAAA TATGTGCTTG TCACAGCTTC CAACACCTTC AAAATACACT CCATGCTCAA AAATGCACTT TTTAAAGCCA
ATTTGGCTAA GAAAACTCTA TCATTTTTTT CCAAGTTATT GCCGCTTGAT TGAGGCCATA CAAGGCCTTC CTCAGTCTGT
ACACCTTATC TTCTTGCCCT TTAATCATAA AACTTACATA TGCTTCCTCA TCAAGAGATC CATTTACGAA AACTAACTTC
ACATATAATT GGTACATGGT CTAGCCTCTT AAATCTTTAA CTGCAACCAT CAATCTTAAT GTTTCCATTC TTGCCCAGGT
GCATAGGCCT CGTCATAACC AGTTCCTTCT CTATGCAAGA ACCTCTTAGC AATTACTTTG ACTTTTTGCT TCATCACTTC
ACCATATGGG TTTACTTTAT CTTTGTATAC CCACTCAAAA GCGATGAACC TTTTCTTAGA TGACAGACTT ACTAATTCTC
ATATTTGGTT CTTCTCAATT GAGCCAATTT CTTCTTTCAT AGTATTGACC CCACTTAGGT TCTGGAATTG ATCTTTCAAA
GTAAATTGGT CTAACTTCAG ACATCAGAAC ATAGTGCCCT AGTTCACTTT CAGAATCTAC TGCAATGTCT GGCATGATAA
CATAGTCATT TAGATTAGGT GGAAGTTTCC TTACCCTTAT GGATCTTCTA AGATCTGGTG GAGCATTTAT GTTAATCTCA
GATTCAATTA GACTAGTAGA TTCAAACATC ATTTAGCTGA GTTGCTACTT GCCTTAGATT TCTAATCCCA TCTTTTAGTT
TCATCAACCA CCATATCTCT ATTTACTATC ATTTTCTTCT TGCCTCTTGT AGAATGATAA CCGATGAATA TCATCTGCTC
TTCCTTGTTG CCAAGTTTCC TTCTAAACTG ATCTAACACA TGCTTGAAAC AAATTGATCA GCACTAGGCT TTCTACCTGT
CCAAGCTTCC TCGCGTGTCT TTCCTTCTAG CTTCTTAGTG GGTGATCTCA TTAGAATATA TACATCTATA TAGAGACTTT
CTCACCCCAT GGATAACTTG GTAAGCCTTT CTCCTCAACG TCTCATCATG TTCATGATGG TTTTTTTTCC TTTCTACAAT
ATCATTATAT TCTGGTGTAT AGGGAGGTGT AACTTCATGG ATAACATAAC ACCCTCTCCT TCATAGTTGC TATTGAATTC
ATCTGAAACA TATTCACAAC CACCGTCAGT TCTTATAATT TTCAGTAAAT TGCCACTTTG CCTCTAAGCT AGGGACTTGA
ATTTCTTAAA CATATCAAAC ACATCACTTT TGTTATTAAT CAAGTTGACT CACACCCTCC TATTCAAATC ATCAATAAAG
TTGACCACAC CTTTTTAACT GTCTAACACC TTCTATAATT TGAATTACAA CCACTAACAG TTTGGTTTGA AAGTCAAATG
AGAATCTGAT ACCTAGATCA ATAAACTCTG ATTTTGGTAT TTTATTCTCT ACAAGTTAGA AGTCATTGTT AAAATGTCTC
TTCTAAATTC GAGTAATGTT TTTTGCAACG TGAACAGGTC GGCGAAGATG AATTTGGATA TATGCTTGCG GATATACTAA
AGGAAAATAA TGTAAACCAT GAAGGGATGC GTTTTGACCC TGGTGCACGT ACTGCCTTGG CATTTGTTAC ACTGAGGAGT
GATGGAGAGC GAGAGTTCAT GTTTTATCGT AATCCCAGTG CTGATATGCT GCTCCAAGAA GATGAGCTTG ATTTGGACCT
AATCAGAAAG GTAAAACCAA AAGCAGAGTT TGTGGTTGTC AAACTAAAGC AAAATGTACC CCGAGTGGAA TAAAAGGGAA
ATCAAACCTC TATCGAGCAT GTTACTCAAC ATTCTTTCTG TTGCACTTTT CTCACGTAAT ATTTGTTCAG TTATTTAATA
TCACTTCTTT CAACTAATAC TTGGTGAATT TGTTTAACTA TTAGTATCCC TTTGGATGAA TTTCTTCACT GCCAAGTCTA
TGTTTCACTT CTTAATATGT TCTGCTCTAA CTCTTCTAAA TTTATGAATT ATAGTAATAT TGTTCTATTG TTTCATGCTA
CAAGGCGAAG ATTTTCCATT ATGGTTCTAT AAGTCTTATA ACAGAACCAT GCAAATCAGC ACACATTGCT GCAGCAAAGG
CTGCAAAAGA TGCTGGTGTA GTTCTGTCTT ATGATCCTAA CCTGAGGCTT CCTTTATGGC CTTCTGAAGA TAGTGCAAGA
GAAGGAATTC TGAGTATATG GGAGACTGCA GATATCATTA AGGTAGAACA TATATTGATT ATAGTCTTTA GAAATAGGCT
TTTCTCGCTC TCTTTTCTAG AGTACGGAAT GTAACAATAT GATGACTGTT TCAGGTAAGT GAAGAAGAGA TTTCTTTTCT
TACAAAAGGT GAGGACCCAT ACGATGATGC TGTTGTACGT AAACTATTCC ACGAAAACCT CAAGCTACTC CTAGTTACTG
AAGGTGCAGA AGGTTGTAGA TATTACACCA AGGTAAGCCT TCCAAACATG CCATTTTCCA AAATTCATTT CAACTCTTGC
TAATATTTGT TTCATGGTCA CCATTTGATG TATCACGAGG TAGTAATGTT TACTAATTAA GCACTTGTTG CATAAACTGT
ACCCTCATAT TCCAGCAGAT TAAGAATTGA AGCAGCTTAT TTGTAGCACA AAAAAGCTGC AAATCACATT ACAGTGTTTG
TGTCATTTAG AAAAAATGAA TCCAAGAACT CTTCTACCAA TAGAATGTCC TGTTATCCCT TGAAGCCAAA GTTAAGGCAA
AGCAGCTTGT GGGATTTGAA CGCAGCACCA AGTGTCTCAC AGAGAGACTT GGAGCCACTT GAGCCAAGGT TCTTAATCTT
AGCAAAATTT TCAAAGTAGG ATGTTGATGA AAAAGATATG TAATAATAAA CCTTCAATGA GTCCTTGTTG TAATTCTTGA
ATACAATAGT TGGAACATAA AATTGTTGAA AACAAAATAG GGAATATTTG TTTGGCATCC TCTCTTCTTT TGGAAATTGA
TTGTTGAAGA TAACTAAAAG AAGTATTGGA AAAGTTATTA GCTACAAATT CTAATGGCAT TTATGCTGCT AAACATAGTG
TACTATTGAT TATTATGATT TGAAACCTGT CCTGGTATTT CTTTGCAGGA GTTCAGTGGC AGGGTGAAGG GATTGAAGGT
GGATGCTGTT GACACCACTG GTGCTGGTGA TGCTTTTGTG GCTGGAATGT TATCACAATT ATCCGTGAAT CTTTCATTGA
TTCAGGTAAG GAAAATGTAT TTGCTTTTGT TATTAACACA TCCCAAAAGT TTACATCTCA CAACTGCAGA AACTCTTGCA
GTATGGAGCA CATATCATTG TTTAAATTAT TGAAAGAAAT CTCAATATCT TGCCTTAACT TCTGTGATTT TATGGCTGTA
AATGTAAAAC ACGGAAGAAT TGGGAACTGG AATAAGGAAA AAAGTGTTCT TAATCTTTAT ACTTTCGGTA ACACTAGAAT
TTAGTGTTTC TATTTTCAAA TGGATGAGTT TACTACTCCA ACTTCAGAAA TATGTGCTTT AGTATTGCCT CAGTGTTTAA
ACTTTAGTAA TAATTTTTTT ATTATCACTA CAAAGTTAAG TTCACTTATT TTAAAATTGG AAAACTAAAT TCTTCAATTT
GAAATATAAA AGCCAAAACT GAAATTGGAA AAACCAAACA TACATTTCCC CTGAAAATAA TCACTCTGCA AATGGGTGCC
CACAAGTGAG TTTAAGGCTT TAGAATTTAA CTGAAATGTG CTAACAATAT AATAAGTTTT ACAATGTTAT TTATTATAGA
TTATAATGCA TGGTGAGACT GGCAACTTTT ATGATTTATG ACTGTAGAAA GAAGAAGAGT TGAGAGATTC TCTAAAGTTT
GCTAATGTCT GTGGTGCATT GACTGTGACT GAGAGAGGTG CAATTCCAGC TTTACCTACC AAGGAAGCTG TTCTTGATGC
TATGCTTAAG CCAGTCTCCT AGCTTTGCGG CCACTCAATG TAATTATGTG GTGAGTGAGG ATAATTCTTT TTGGAGAGGG
GAATTTAAAT TCTTCTGGGA AATTGTGAGC TAGAACAATG AATAAGAACT GGTTATTTAG TTCAGGCAAA ATTCTACCCT
AATCAAGTTT TTCATTGTTA GCTAATGGAG AATTGTTCTC CATATATCCA TTTGTACTTG ATCTATGATG TAGAAGTTGC
TATGTAATTT GT

>Vigan.03G092400.01
GTCAGCAATA AGCAGTTCAA AACGTGCAGA TGCTTATGAA TCTTTCTATT GTCTGATAAA CAAATAAATA ATAAAAAAAG
CAGCAGAGAA ATTGCACATA TCGTGCATTC TGTTTCCTTT GCTTACTCCG CAACACAACG TAACCCAGAT TTCGTCCATT
CCAAAGGCAA TTTTCACACA AACCCCATCA ATTATCTTGC TCACATTCCA AATTCAGAAA AAATATTCAA TTTCGGTTGA
TAAAGAGAGA AAAGAAACGA ATTTCAAGAG CCAAGTCCTT GAGGGGTGTT TAGTAGTGAT TTCCTTGTTT GATGGCTCTT
CACTGTGGCG TTTTCAGCTT CAGGAGTGTA GCTTCTCACC CTCTATGTTC TGTCAAGTTC AGTCAGCCCA CTGTCCAAGC
TTCCACCTTT GCTTCCCCTC TTACCCCTCC TACTGCCAAA TTGAATGTCA GAGGAAAGGC TGTTCCTGGT GATGGGACAC
CTGAAACAAA GGAATCACCT CTTGTGGTTT GTTTTGGGGA AATGCTCATT GATTTTGTCC CAACTGTCAG TGGCCTTTCT
TTGGCTGAAG CACCTGCGTT TAAAAAGGCT CCTGGAGGTG CCCCTGCTAA TGTTGCAGTA GGCATATCTC GATTAGGGGG
TTCATCAGCT TTCATTGGAA AGGTCGGCGA AGATGAATTT GGATATATGC TTGCGGATAT ACTAAAGGAA AATAATGTAA
ACCATGAAGG GATGCGTTTT GACCCTGGTG CACGTACTGC CTTGGCATTT GTTACACTGA GGAGTGATGG AGAGCGAGAG
TTCATGTTTT ATCGTAATCC CAGTGCTGAT ATGCTGCTCC AAGAAGATGA GCTTGATTTG GACCTAATCA GAAAGGCGAA
GATTTTCCAT TATGGTTCTA TAAGTCTTAT AACAGAACCA TGCAAATCAG CACACATTGC TGCAGCAAAG GCTGCAAAAG
ATGCTGGTGT AGTTCTGTCT TATGATCCTA ACCTGAGGCT TCCTTTATGG CCTTCTGAAG ATAGTGCAAG AGAAGGAATT
CTGAGTATAT GGGAGACTGC AGATATCATT AAGGTAAGTG AAGAAGAGAT TTCTTTTCTT ACAAAAGGTG AGGACCCATA
CGATGATGCT GTTGTACGTA AACTATTCCA CGAAAACCTC AAGCTACTCC TAGTTACTGA AGGTGCAGAA GGTTGTAGAT
ATTACACCAA GGAGTTCAGT GGCAGGGTGA AGGGATTGAA GGTGGATGCT GTTGACACCA CTGGTGCTGG TGATGCTTTT
GTGGCTGGAA TGTTATCACA ATTATCCGTG AATCTTTCAT TGATTCAGAA AGAAGAAGAG TTGAGAGATT CTCTAAAGTT
TGCTAATGTC TGTGGTGCAT TGACTGTGAC TGAGAGAGGT GCAATTCCAG CTTTACCTAC CAAGGAAGCT GTTCTTGATG
CTATGCTTAA GCCAGTCTCC TAGCTTTGCG GCCACTCAAT GTAATTATGT GGTGAGTGAG GATAATTCTT TTTGGAGAGG
GGAATTTAAA TTCTTCTGGG AAATTGTGAG CTAGAACAAT GAATAAGAAC TGGTTATTTA GTTCAGGCAA AATTCTACCC
TAATCAAGTT TTTCATTGTT AGCTAATGGA GAATTGTTCT CCATATATCC ATTTGTACTT GATCTATGAT GTAGAAGTTG
CTATGTAATT TGT

>Vigan.03G092400.01
ATGGCTCTTC ACTGTGGCGT TTTCAGCTTC AGGAGTGTAG CTTCTCACCC TCTATGTTCT GTCAAGTTCA GTCAGCCCAC
TGTCCAAGCT TCCACCTTTG CTTCCCCTCT TACCCCTCCT ACTGCCAAAT TGAATGTCAG AGGAAAGGCT GTTCCTGGTG
ATGGGACACC TGAAACAAAG GAATCACCTC TTGTGGTTTG TTTTGGGGAA ATGCTCATTG ATTTTGTCCC AACTGTCAGT
GGCCTTTCTT TGGCTGAAGC ACCTGCGTTT AAAAAGGCTC CTGGAGGTGC CCCTGCTAAT GTTGCAGTAG GCATATCTCG
ATTAGGGGGT TCATCAGCTT TCATTGGAAA GGTCGGCGAA GATGAATTTG GATATATGCT TGCGGATATA CTAAAGGAAA
ATAATGTAAA CCATGAAGGG ATGCGTTTTG ACCCTGGTGC ACGTACTGCC TTGGCATTTG TTACACTGAG GAGTGATGGA
GAGCGAGAGT TCATGTTTTA TCGTAATCCC AGTGCTGATA TGCTGCTCCA AGAAGATGAG CTTGATTTGG ACCTAATCAG
AAAGGCGAAG ATTTTCCATT ATGGTTCTAT AAGTCTTATA ACAGAACCAT GCAAATCAGC ACACATTGCT GCAGCAAAGG
CTGCAAAAGA TGCTGGTGTA GTTCTGTCTT ATGATCCTAA CCTGAGGCTT CCTTTATGGC CTTCTGAAGA TAGTGCAAGA
GAAGGAATTC TGAGTATATG GGAGACTGCA GATATCATTA AGGTAAGTGA AGAAGAGATT TCTTTTCTTA CAAAAGGTGA
GGACCCATAC GATGATGCTG TTGTACGTAA ACTATTCCAC GAAAACCTCA AGCTACTCCT AGTTACTGAA GGTGCAGAAG
GTTGTAGATA TTACACCAAG GAGTTCAGTG GCAGGGTGAA GGGATTGAAG GTGGATGCTG TTGACACCAC TGGTGCTGGT
GATGCTTTTG TGGCTGGAAT GTTATCACAA TTATCCGTGA ATCTTTCATT GATTCAGAAA GAAGAAGAGT TGAGAGATTC
TCTAAAGTTT GCTAATGTCT GTGGTGCATT GACTGTGACT GAGAGAGGTG CAATTCCAGC TTTACCTACC AAGGAAGCTG
TTCTTGATGC TATGCTTAAG CCAGTCTCCT AG

>Vigan.03G092400.01
MALHCGVFSF RSVASHPLCS VKFSQPTVQA STFASPLTPP TAKLNVRGKA VPGDGTPETK ESPLVVCFGE MLIDFVPTVS
GLSLAEAPAF KKAPGGAPAN VAVGISRLGG SSAFIGKVGE DEFGYMLADI LKENNVNHEG MRFDPGARTA LAFVTLRSDG
EREFMFYRNP SADMLLQEDE LDLDLIRKAK IFHYGSISLI TEPCKSAHIA AAKAAKDAGV VLSYDPNLRL PLWPSEDSAR
EGILSIWETA DIIKVSEEEI SFLTKGEDPY DDAVVRKLFH ENLKLLLVTE GAEGCRYYTK EFSGRVKGLK VDAVDTTGAG
DAFVAGMLSQ LSVNLSLIQK EEELRDSLKF ANVCGALTVT ERGAIPALPT KEAVLDAMLK PVS*