Variant information

Chr03:9302883 - 9309454

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
9302977GT622406.770.98DOWNSTREAM(|2725||None|Vigan.03G092200.01), UPSTREAM(|1330||None|Vigan.03G092300.01), UTR_3_PRIME(|136||None|Vigan.03G092400.01)Vigna nepalensis
9303290TG662694.771.00DOWNSTREAM(|3038||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|1643||None|Vigan.03G092300.01)Vigna nepalensis
9303716GT622396.771.00DOWNSTREAM(|3464||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2069||None|Vigan.03G092300.01)Vigna nepalensis
9303728TG582263.771.00DOWNSTREAM(|3476||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2081||None|Vigan.03G092300.01)Vigna nepalensis
9303759GA622710.771.00DOWNSTREAM(|3507||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2112||None|Vigan.03G092300.01)Vigna nepalensis
9303769CT602648.771.00DOWNSTREAM(|3517||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2122||None|Vigan.03G092300.01)Vigna nepalensis
9304534AG602505.771.00DOWNSTREAM(|4282||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2887||None|Vigan.03G092300.01)Vigna nepalensis
9304549AG662650.771.00DOWNSTREAM(|4297||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2902||None|Vigan.03G092300.01)Vigna nepalensis
9304595TC642602.771.00DOWNSTREAM(|4343||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|2948||None|Vigan.03G092300.01)Vigna nepalensis
9305675TC532072.771.00INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|4028||None|Vigan.03G092300.01)Vigna nepalensis
9306042GC552197.771.00INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|4395||None|Vigan.03G092300.01)Vigna nepalensis
9306652TC582393.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9306673CA602390.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9306812TG461881.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307017TG491941.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307221GA552233.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307241CT532117.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307374CT481915.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307551CA451657.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307639TA471852.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307859AC562243.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307983CA602802.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308047TG451833.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308205TC592375.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308669GT592389.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308790AT622694.771.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9309019GA592397.771.00NON_SYNONYMOUS_CODING(MISSENSE|gCc/gTc|A42V|None|Vigan.03G092400.01)Vigna nepalensis
9309235TC642593.771.00UTR_5_PRIME(|92||None|Vigan.03G092400.01)Vigna nepalensis
9309254AG672726.771.00UTR_5_PRIME(|111||None|Vigan.03G092400.01)Vigna nepalensis
9309419TC552175.771.00START_GAINED(|||None|Vigan.03G092400.01), UTR_5_PRIME(|276||None|Vigan.03G092400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
9303594AAT591945.731.00DOWNSTREAM(|3343||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|1948||None|Vigan.03G092300.01)Vigna nepalensis
9305052TTTG562507.731.00DOWNSTREAM(|4801||None|Vigan.03G092200.01), INTRON(|||None|Vigan.03G092400.01), SPLICE_SITE_REGION(|||None|Vigan.03G092400.01), UPSTREAM(|3406||None|Vigan.03G092300.01)Vigna nepalensis
9305644TTA582197.731.00INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|3998||None|Vigan.03G092300.01)Vigna nepalensis
9306064GGA521733.731.00INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|4418||None|Vigan.03G092300.01)Vigna nepalensis
9306107TAGT461999.731.00INTRON(|||None|Vigan.03G092400.01), UPSTREAM(|4461||None|Vigan.03G092300.01)Vigna nepalensis
9306760TTA461590.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307151GGCA642827.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307280AATT542227.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307681GAG401339.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9307979TTTATCCCA662961.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308805CCT642813.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis
9308961ATA712564.731.00INTRON(|||None|Vigan.03G092400.01)Vigna nepalensis