GBrowse Details

Vigan.03G048100.01

Basic Information:
Name: Vigan.03G048100.01
Multiple alignment
Variant Information
Position: Chr03:4583099..4586693 (- strand)
Length: 3595
Functional Information:
Description: Similar to Uncharacterized protein. [I1JIW7, Glycine max]
GO: Biological Process: transport (GO:0006810)
Biological Process: vesicle-mediated transport (GO:0016192)
Cellular Component: integral to membrane (GO:0016021)
InterPro: Synaptobrevin (IPR001388)
Longin domain (IPR010908)
Longin-like domain (IPR011012)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.03,21.36,20.56,17.99,22.54,39.92,53.40,30.21
Arabidopsis thaliana homolog: AT5G11150.1
Structure :
Position: Chr03:4583099..4583794 (- strand)
Length: 696
Type: three_prime_UTR
Position: Chr03:4583795..4583882 (- strand)
Length: 88
Type: CDS
Position: Chr03:4585204..4585367 (- strand)
Length: 164
Type: CDS
Position: Chr03:4586035..4586225 (- strand)
Length: 191
Type: CDS
Position: Chr03:4586315..4586531 (- strand)
Length: 217
Type: CDS
Position: Chr03:4586532..4586693 (- strand)
Length: 162
Type: five_prime_UTR

>Vigan.03G048100.01 class=Sequence position=Chr03:4583099..4586693 (- strand)
TTCCAATCAG AAAGCAGAAG GCAGTGATGA TGGTAAAAGC AAAAAGTCAA GAAGAAAGGG ACACTTCATG AACAGAAGTG
GAAGAAGAAG AGAATAGAAG AGAAGAGGGT TCGGTATTGT GTTGTGTTGG CGCTTTTCGA TTGATTCACC GATCGGAACC
GAATGGGGAT TCTGTACGCG CTGGTAGGTC GCGGATCGGT GGTGCTGGCG GAGTACAGCG GCACCACCAC CAACGCCAGC
GCAATCGCGC GGCAGATTCT CGAGAAGATC CCAGGCAACA ACGACACGCA CGTTTCCTAC TCTCAGGATC GCTACATCTT
CCACGTTAAA CGCACCGATG GGCTCACCGT TCTCTGCATG GCTGACGACA CTGCCGGCAG TGCGTTTTCC GATCTGTTCA
CTACTCCTTC TGTAAAACCT AAATCCATCA CTTACTCGCT TTTAATGTTT TGAATTCATT CGTTGCAGGG AGACTTCCTT
TCGCGTTTCT CGAGGATATT CATCAGAAGT TCGTGCGGAC TTACGGGCGA GCCGTTCACT CCGCGCAGCC TTACGGAATG
AACGAGGAGT TCTCTAGGGT TTTGAATCAG CAGATGGAGT ATTACTCCAG CGATCCTAAC GCCGATAGGA TCAATCGGCT
CAAAGGTGAA ATGTCTCAGG TGTGGTGGTT TTTCTTTTCG TTTTTTTGAG TAATTGAAAA TTTAGAACTG ATTGTTTGGC
AAGTGTGTGG CTAAACAACC CTGACAATGG TAATCAGTGA GTTAGTAGCT TGTATGATTA CATTTTTGCA TCAATTCCGC
TTCATTTCAT CCTTGTTTAG TAATTCAACA CTGCCCAAAT TAAATGAGCA TGATATTGGA ACATTAAATT TATAATTAAT
GGAAATACAT CTAATAATGA TTAGTGAGCA GCGTCTCTAT TTGATATATG TTCCAAGACA GAGCTGCACT GACCTGCACT
TTGACTTTTA TTTACATTTT ATACTTTGGT CTATTTTGGA TAAGCTTCTA TATGAACACT TATTAGAGAA TAAACTGAGA
AATAAAATTT ATCGAACTTC TCCTATTAAG TTAAAATCCC GTTATGCTCT ATAGCTTTGG GAGAAGTTTT GATAAGAGAG
CTTCCGAAAA AGTGAAGGTG TATAAGACTA AAGTTAATTG TAACTTTTTA ATTTATGAGA GAAGCTGGAT TTATTTACCT
CTTTATTTTC TTTTCCCTTA TGTATTTGTT GAGAAGATTT TCTGAGTCGA GCCTTATTTG TTGTTCATTT GGTTGTTTTG
CTCTCAATGT GTGTGTTCTC TTTTTTTCTT TTGGGTTCTT TAACAGGTAC GAAATGTCAT GATAGAAAAT ATTGACAAAG
TTTTAGATCG AGGTGATCGG TTGGAGTTGC TTGTGGATAA AACTGCTAAT ATGCAAGGAA ATACATTTCG CTTCAGGAAG
CAAGCTCGCC GCTTCAGAAG CACCGTGTGG TGGAGAAATG TCAAGCTCAC GTATGTTCTC TATCTAAAAC TCACTCATGT
TAGCTGAACT TGCAACAAAA AACTGCAGTC TTTTGAATGA ATCTGAAACC TCATCTCCAT TTTTTTTGTA TAATTTTTTC
CTCAATGTTG ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT
ATATATATAT TCAGTAGAAT TTCAGAGGAC TATGATGGAA ATCACCTGGG CTTAAACTTT GGTTGAAACT TGAAGTGTTG
GTAATTCTAA ATGTGCTAAA GTAATTTTCT TGGTAGAAAT AATTTCGATT GTAAAAGTAT AAAAGAAGAA AAAGTATTAG
AGAAAGGAAG AGGTAAGATT GAAAAAGGTT GAAGGGTAAG AAATCCTCAA CAAAGACTAA AGAGGAGGAA AACCAGAGAC
AAATGGAAGC TCCTAAAAAC TAGTTAAAGT AGGAGAGTTG TGTATCCTTG CATGTGCAAC ACCGATACAC TTGAAGAGGT
GAAAATGATT TTATCTCATA AAATTGTAGA GGTAAGAATA CAGTCTTGGA GATGTGGGGT TTCCTATCAA ACCCACAAAT
TCGCATGAAC AGTGCATTGC CACAACATTT TTATGTTCCT TCTTATCAAA CCTTTCAAAG TGGAATGTAT AGAAATTGAT
CCAGTGAACT AGAAGACACC CATGTCTCAC CAAAATTATC TAAAAGTTCC TTTTACGTGG CGGACTTCAA AGTTAGATCT
AGCTTCTTTG GTGTCCGAAA ATCACACTTT CTAATAAAAA CTCTAGTACC AGTATAAACC TATGGTTATT AATTTGAACA
TGTTCTAATT ATTTCAATGG TTCAAAATTA ATTTTATCAA AATCATTTCT AGGCAACTTT ATGACAAATG GGCCCTTGGT
TGAACACATT TAAGGGGAAG GGCCATGCGA GGGTGTCTAA TTTGCAACAT ATAAGGTTTC CAAGAAACCC AAAAATAGTG
TTATCATTAA GGTTCCGTGT TCTCATATGA TATAAAATTA TAATTGCCTA GCTATATTTG CATGATAAAT CCCCCTACAT
TCGATTGATT TTTATGTTAT TGATAGTGCA ACATCTTTCT AAATATAATA AAAATTAAAG TTTTTGTGTG TTGAGAGTTC
CATAAAGTAA AATTTGAATT CACCTCTACT AGATTTAGGA TAATTTCAAA TAGTAGGCAA CAAATTGTTT CATTTGTAAA
ACCTAGTCAT AACATCATTA ATCAATCTTT AACTACAGTC AGAGGATTCT CTGTTTTTCG GTCTTACTGA CTAAACAGTT
GCATGTTGCA GGGTTGCACT TATTCTCATC CTACTTGTAG TAGTTTATGT TGTGCTGGCT TTTGTTTGCC ATGGGCCCGC
GCTACCATCT TGCTTTTAGT GAAGGATTGG CAAGTGAATT CTATGTGTGC TTCCTTGTGG TCTTCAACTT GCAGACGTCA
CTTCTTTTTT ATCTGCCTTT GATTTGCAGA TTCCATTTCT TCAACTATAT TACTGGGTTG TCCACTTTTC TGCTAGTGAA
TTTCTTGCCA TAGATTGAAG TGTTCTTTTC TTTTTCATAT AAAGTTTGAG GGGCAGAAAA CTTATATCGT TTATTGTATT
CTCATACCAG CCCAAAGATT TTAGTTGATG TATAGTGTTG CAGCTTGAGG GTGTCATGAA TGTTCTCTTG TTCAAAACGG
GGAAGGGTAA GTCTTAAATT CCATTTGTTT TTTCATAGCT CAGTGAACCG GTATTGTTAA ACTTCTCGGC CCTTGTTCTC
TTTGTCAGCT TAATGTATAT TTTTTTAATT TATCCATGTT CTCCTGTTTT TAACCTTGCT AAACCTTAAG ATTGCACAAG
TTGCTATAAA TTAATTTTGA AGAAAAAGGT ATGTAAAGGT GGACCATGGA ACAACTGCTC CATCTTAGCC ATATTTTTGA
GCTGTAAGAG ACCATCTCTG ACGTTTGTTA TATTGACAGC ATGTTTGGAT CTGTCTGTCT AGCCAGAAAG CTAATGAACG
CCAGTTGAAG AAAGCAACGG TGTGAAGTAA TTCACGCGTC ACTTTTTTAC CGTTAATGAA CAACTATTGT GGCGG

>Vigan.03G048100.01
TTCCAATCAG AAAGCAGAAG GCAGTGATGA TGGTAAAAGC AAAAAGTCAA GAAGAAAGGG ACACTTCATG AACAGAAGTG
GAAGAAGAAG AGAATAGAAG AGAAGAGGGT TCGGTATTGT GTTGTGTTGG CGCTTTTCGA TTGATTCACC GATCGGAACC
GAATGGGGAT TCTGTACGCG CTGGTAGGTC GCGGATCGGT GGTGCTGGCG GAGTACAGCG GCACCACCAC CAACGCCAGC
GCAATCGCGC GGCAGATTCT CGAGAAGATC CCAGGCAACA ACGACACGCA CGTTTCCTAC TCTCAGGATC GCTACATCTT
CCACGTTAAA CGCACCGATG GGCTCACCGT TCTCTGCATG GCTGACGACA CTGCCGGCAG GAGACTTCCT TTCGCGTTTC
TCGAGGATAT TCATCAGAAG TTCGTGCGGA CTTACGGGCG AGCCGTTCAC TCCGCGCAGC CTTACGGAAT GAACGAGGAG
TTCTCTAGGG TTTTGAATCA GCAGATGGAG TATTACTCCA GCGATCCTAA CGCCGATAGG ATCAATCGGC TCAAAGGTGA
AATGTCTCAG GTACGAAATG TCATGATAGA AAATATTGAC AAAGTTTTAG ATCGAGGTGA TCGGTTGGAG TTGCTTGTGG
ATAAAACTGC TAATATGCAA GGAAATACAT TTCGCTTCAG GAAGCAAGCT CGCCGCTTCA GAAGCACCGT GTGGTGGAGA
AATGTCAAGC TCACGGTTGC ACTTATTCTC ATCCTACTTG TAGTAGTTTA TGTTGTGCTG GCTTTTGTTT GCCATGGGCC
CGCGCTACCA TCTTGCTTTT AGTGAAGGAT TGGCAAGTGA ATTCTATGTG TGCTTCCTTG TGGTCTTCAA CTTGCAGACG
TCACTTCTTT TTTATCTGCC TTTGATTTGC AGATTCCATT TCTTCAACTA TATTACTGGG TTGTCCACTT TTCTGCTAGT
GAATTTCTTG CCATAGATTG AAGTGTTCTT TTCTTTTTCA TATAAAGTTT GAGGGGCAGA AAACTTATAT CGTTTATTGT
ATTCTCATAC CAGCCCAAAG ATTTTAGTTG ATGTATAGTG TTGCAGCTTG AGGGTGTCAT GAATGTTCTC TTGTTCAAAA
CGGGGAAGGG TAAGTCTTAA ATTCCATTTG TTTTTTCATA GCTCAGTGAA CCGGTATTGT TAAACTTCTC GGCCCTTGTT
CTCTTTGTCA GCTTAATGTA TATTTTTTTA ATTTATCCAT GTTCTCCTGT TTTTAACCTT GCTAAACCTT AAGATTGCAC
AAGTTGCTAT AAATTAATTT TGAAGAAAAA GGTATGTAAA GGTGGACCAT GGAACAACTG CTCCATCTTA GCCATATTTT
TGAGCTGTAA GAGACCATCT CTGACGTTTG TTATATTGAC AGCATGTTTG GATCTGTCTG TCTAGCCAGA AAGCTAATGA
ACGCCAGTTG AAGAAAGCAA CGGTGTGAAG TAATTCACGC GTCACTTTTT TACCGTTAAT GAACAACTAT TGTGGCGG

>Vigan.03G048100.01
ATGGGGATTC TGTACGCGCT GGTAGGTCGC GGATCGGTGG TGCTGGCGGA GTACAGCGGC ACCACCACCA ACGCCAGCGC
AATCGCGCGG CAGATTCTCG AGAAGATCCC AGGCAACAAC GACACGCACG TTTCCTACTC TCAGGATCGC TACATCTTCC
ACGTTAAACG CACCGATGGG CTCACCGTTC TCTGCATGGC TGACGACACT GCCGGCAGGA GACTTCCTTT CGCGTTTCTC
GAGGATATTC ATCAGAAGTT CGTGCGGACT TACGGGCGAG CCGTTCACTC CGCGCAGCCT TACGGAATGA ACGAGGAGTT
CTCTAGGGTT TTGAATCAGC AGATGGAGTA TTACTCCAGC GATCCTAACG CCGATAGGAT CAATCGGCTC AAAGGTGAAA
TGTCTCAGGT ACGAAATGTC ATGATAGAAA ATATTGACAA AGTTTTAGAT CGAGGTGATC GGTTGGAGTT GCTTGTGGAT
AAAACTGCTA ATATGCAAGG AAATACATTT CGCTTCAGGA AGCAAGCTCG CCGCTTCAGA AGCACCGTGT GGTGGAGAAA
TGTCAAGCTC ACGGTTGCAC TTATTCTCAT CCTACTTGTA GTAGTTTATG TTGTGCTGGC TTTTGTTTGC CATGGGCCCG
CGCTACCATC TTGCTTTTAG 

>Vigan.03G048100.01
MGILYALVGR GSVVLAEYSG TTTNASAIAR QILEKIPGNN DTHVSYSQDR YIFHVKRTDG LTVLCMADDT AGRRLPFAFL
EDIHQKFVRT YGRAVHSAQP YGMNEEFSRV LNQQMEYYSS DPNADRINRL KGEMSQVRNV MIENIDKVLD RGDRLELLVD
KTANMQGNTF RFRKQARRFR STVWWRNVKL TVALILILLV VVYVVLAFVC HGPALPSCF*