GBrowse Details

Vigan.03G029100.01

Basic Information:
Name: Vigan.03G029100.01
Multiple alignment
Variant Information
Position: Chr03:2272831..2276249 (+ strand)
Length: 3419
Functional Information:
Description: Similar to Uncharacterized protein. [I1JJB8, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:140.66,35.73,94.32,735.00,53.43,138.43,28.98,281.29
Arabidopsis thaliana homolog: AT4G26850.1, AT5G55120.1
Automatic updates:
Name: NM_001254055 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max GDP-L-galactose phosphorylase 1-like (LOC100806541), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:2272831..2273553 (+ strand)
Length: 723
Type: five_prime_UTR
Position: Chr03:2273554..2273677 (+ strand)
Length: 124
Type: CDS
Position: Chr03:2274166..2274275 (+ strand)
Length: 110
Type: CDS
Position: Chr03:2274367..2274426 (+ strand)
Length: 60
Type: CDS
Position: Chr03:2274547..2274789 (+ strand)
Length: 243
Type: CDS
Position: Chr03:2274877..2275062 (+ strand)
Length: 186
Type: CDS
Position: Chr03:2275176..2275424 (+ strand)
Length: 249
Type: CDS
Position: Chr03:2275513..2275845 (+ strand)
Length: 333
Type: CDS
Position: Chr03:2275846..2276249 (+ strand)
Length: 404
Type: three_prime_UTR

>Vigan.03G029100.01 class=Sequence position=Chr03:2272831..2276249 (+ strand)
AAAAAAGATT CTGTAATGGA ATATTCGTGG AAGCAGGAGT GCTCAAATAA TGGTCCTGCT CTTACTTAAA TAATGTGAAG
AAAAACCAAA AACATACAAA ACAACGAAAC CACCGTTTCT CTTTCAATTA TTGTCTCTTC TCTCTCACTC TCTGCTATTT
CATTCATCCA TAGATTCTTC TTCCAACACA CAACACAACA CTTAGATTCA ACCATCTTTC TCTCTCTTCT TTTTCTTCAC
TTTGGTCTCT CGCAGTTCTT AACTCATAAG TCTTATCTAT CTATATAAGA AGAAAGGCAG CTCCTTTTTC TGGCTCACAG
TCACAAGCTT CATCGAATCT AAGTGAGAGA AGTTTGCATG TTGAAGAAAT CATCGAGAAA AGGGAAAGAG AAAGAAGAGG
GGATTGGGTT GAAACCCGGG GTTGAAGCGT TGCAGACATC ACGGCTATTC TAAGAGTCTA TCGCTTTCTC ATTCATGTCC
CAACTGTACG ACGGGCGGGT TGCATAATTC TCGCCAACCC TTCGCCGCAC GGTGGGCGTG GTGCGCTGCC TTCAGAAGGT
GGTAGTCCCT CCGACCTCCT CTTCCTCGCC GGTGGCGGTT TCTCCTCCTC CTGCTAGTTT CTTCTTTCTC CTTTCTTCTA
CTTAGTCAAC TGCTTTAACA AAACACGCGC AAACACTTTC GCTCTTTCTT CTTCTTCTTC TTTCTCTTCT TTGATTTCAC
AAAATGATGC TCAAAATCAA GAGGGTTCCT ACTGTCGTTT CCAACTACCA AAAAGATGAT GTTGGAGACT CTTCTCGTCC
CGTCGGAGGT TGTGGTCGGA ATTGCCTCAA AGCTTGCTGC ATTCCAGGTC TTTCTTTTGC TCCAACTGAT TTTCATCACT
GTTATTAGTT TGCTTTTATG TTATATGTTA AATTAATTGG CTGTATTAAA ATGATTGAGG GTAAATTACT TGCTGCATGC
ATGAAATAAA GTTTACGAAT TTAGATTTGA TGAGTCAAAG TAAAGTTTGG GAAAGTAATT GAAATTTTGT CACAAAAAGA
CCTGAGTTTT TTTCAGAAAA AAAGTTAGTA TGTAAACTTT TTTTTGAGGT CAGCAAACGG GTTACGAAAC TGACTTTGGA
ATATTCATTC ATGTATCTAG TGGAGGTAGT TGAAAAGAAA ATGAACGGTT CATATTTTAA TGTATTCACG ATTTGTTATT
ATGAATATAC TTATAATCTT CATAATTGAT TTTCTTATCA ACAAATGATA TATATCTGAC TTTAATGAGT TGGATCCAGG
TATCATATAT GTTTTTTTTT TTTTTTGTGA TTTGTGTCTT TGTTTTTGTT TACAGATGCA AAACTTCCTC TGTATGCTTT
TAAGAAGGTT AATGGAAAGG ATTTGGCTAT GCATGAATGC GGGGAGCCTC CCGTGGCATT CCTGGACTCG CTTCTTCTTG
GAGAGGTAAC CATGGAATTT TGGTGATGGA GAACGGTTAA CATGATGTTT TTCTCTGTAC CCTTTGTTGT AAAGTGTTGT
TTACTTTTCA TGGCAGTGGG AAGAACGCAT GCAGAGAGGA CTTTTCCGCT ATGATGTTAC TGCCTGTGAA ACCAAGGTTC
GCTTTGTTTT CCTTTTTCTA AATTCTCTGT CTTTCTCTGC ATAGATATGG GTGGTATGAT TTATGACTGT GGTATGATTT
ATGACTGTGA TGTGTTTTGT GGTGATTTTG GTATAGGTGA TTCCTGGTGA ATATGGTTTC GTGGCTCAGC TTAATGAGGG
TCGTCACCTC AAGAAGAGAC CAACTGAATT CCGAGTTGAT AAGGTTCTGC AACCATTCGA TGAAAACAAA TTCAACTTTA
CGAAAGTTGG GCAAGAAGAG GTCATCTTCC AATTTGAAGC TAGCGACGAC GGAAAAATCC AGTTCTTCCC AAATGCTCCA
GTTGATGTTG ATAATTCTCC CAGTTTTGTT GCCATCAATG TATGGATACC AACCTTAAAG TTGTTCTTCT GGGTTCATAG
GCATTGCATG TGATGATGTT TGTTTGTCTG TTTGTTTTCT TAACAGGTCA GTCCTATTGA GTATGGGCAT GTTTTGCTGA
TTCCGCGCAT ATTTGAGTGT TTGCCCCAAA GGATTGACCG TGAGAGCTTC CTGCTTGCAC TTCACATGGC AGTGGAAGCT
GATAATCCAT ATTTTCGATT GGGTTACAAC AGCTTGGGTG CTTTTGCAAC TATTAACCAT CTTCACTTCC AGGTGCTGGT
TACTGAATTA CCCCTTGTTG GTCGTGTTGA TGTTTTTGTT CTTCAACACT ACTCTGCCAT TAATCAGATC GAAATTTGAT
GACTTTTTTA CATGAATATA CGCAGGCTTA CTATTTGGCT CTGCCCTTTC CCATTGAGAA GGCCCCCACC AAGAAAATTG
CAAATTTAAA TGGTGGGGTG AAGATATCTG AACTGTTGAA GTATCCTGTT AGAGGTCTTG TCTTTGAGGG TGGAGATACT
CTGGAAGATT TATCAAATGC TGTTTCAGAT GCTTGTATAT GTCTTCAAAA CAGTAATATA CCGTTCAATG TTCTTATTAC
TGACTGTGGA AAGCAAGTCT TTCTGTTACC ACAGGTAAAC TAACTCTGAA ACTAAATGAA TTTTCCTTTT CCTAATCTAT
TTTCATTGGT TGTGCGGGTG TATTTACCAA ATATGTTAAC AGTGTTACGC AGAGAAACAA GCTCTTGGAG AAGTGGATGC
TGAGCTTCTT GACACCCAAG TTAACCCTGC TGTGTGGGAA ATTAGTGGGC ACATGGTTTT AAAGAGGAAG AAGGATTATG
ATGAGGCTTC TGAAGGCAAT GCTTGGAGGC TTCTTGCTGA GGTATCCCTC TCCGAAGAGA GGTTCCAAGA GGTCAACGAC
CTTATTTTTG AAGCCATTGG CTGCAGTGAA TTGGACGATA ATGTTGAAGG TGACAAGGAA GTTGATGCAG TCAGCTCAAG
TGCACACTCT ACTGTGGTGG TAGCTGGTTC AAAAGAATGT GTTGTTCTAC AGTAACAAGG CTCTACTACT ATGAACAAAA
CTCATGGAAT CTGCAGCATT CTAAGAATAA TTGCTGAACT ATTATATCAC CGTTTAAGTT GTAGTACTGT GTTGTTCTTG
AGCATTAAGG TCATGTGTTT TATGTATTTA CCTTTTTTCA TGTGGAAGTC GATGAAATAA CTACTCACCT GAGTAGTGTT
GGTGATTTGG GTGTATGGTA ATATGCTTGA CTTGACTGTC TCTTGTGGCT TTCATGCTGC AAGAAATAAT AAATTCAGGT
ATCTGTTTGT TCAGGGCTAA ATCAAACTGC AGCTTGAATT CTCCAGAATG AAACTTTCAC TTGCTGTATT TCGGGCTTCA
CTATGTAATA AGTGTTATGT TTGTATATTA ATAAATGATA TTCTGAATGT CTCTTGGGT

>Vigan.03G029100.01
AAAAAAGATT CTGTAATGGA ATATTCGTGG AAGCAGGAGT GCTCAAATAA TGGTCCTGCT CTTACTTAAA TAATGTGAAG
AAAAACCAAA AACATACAAA ACAACGAAAC CACCGTTTCT CTTTCAATTA TTGTCTCTTC TCTCTCACTC TCTGCTATTT
CATTCATCCA TAGATTCTTC TTCCAACACA CAACACAACA CTTAGATTCA ACCATCTTTC TCTCTCTTCT TTTTCTTCAC
TTTGGTCTCT CGCAGTTCTT AACTCATAAG TCTTATCTAT CTATATAAGA AGAAAGGCAG CTCCTTTTTC TGGCTCACAG
TCACAAGCTT CATCGAATCT AAGTGAGAGA AGTTTGCATG TTGAAGAAAT CATCGAGAAA AGGGAAAGAG AAAGAAGAGG
GGATTGGGTT GAAACCCGGG GTTGAAGCGT TGCAGACATC ACGGCTATTC TAAGAGTCTA TCGCTTTCTC ATTCATGTCC
CAACTGTACG ACGGGCGGGT TGCATAATTC TCGCCAACCC TTCGCCGCAC GGTGGGCGTG GTGCGCTGCC TTCAGAAGGT
GGTAGTCCCT CCGACCTCCT CTTCCTCGCC GGTGGCGGTT TCTCCTCCTC CTGCTAGTTT CTTCTTTCTC CTTTCTTCTA
CTTAGTCAAC TGCTTTAACA AAACACGCGC AAACACTTTC GCTCTTTCTT CTTCTTCTTC TTTCTCTTCT TTGATTTCAC
AAAATGATGC TCAAAATCAA GAGGGTTCCT ACTGTCGTTT CCAACTACCA AAAAGATGAT GTTGGAGACT CTTCTCGTCC
CGTCGGAGGT TGTGGTCGGA ATTGCCTCAA AGCTTGCTGC ATTCCAGATG CAAAACTTCC TCTGTATGCT TTTAAGAAGG
TTAATGGAAA GGATTTGGCT ATGCATGAAT GCGGGGAGCC TCCCGTGGCA TTCCTGGACT CGCTTCTTCT TGGAGAGTGG
GAAGAACGCA TGCAGAGAGG ACTTTTCCGC TATGATGTTA CTGCCTGTGA AACCAAGGTG ATTCCTGGTG AATATGGTTT
CGTGGCTCAG CTTAATGAGG GTCGTCACCT CAAGAAGAGA CCAACTGAAT TCCGAGTTGA TAAGGTTCTG CAACCATTCG
ATGAAAACAA ATTCAACTTT ACGAAAGTTG GGCAAGAAGA GGTCATCTTC CAATTTGAAG CTAGCGACGA CGGAAAAATC
CAGTTCTTCC CAAATGCTCC AGTTGATGTT GATAATTCTC CCAGTTTTGT TGCCATCAAT GTCAGTCCTA TTGAGTATGG
GCATGTTTTG CTGATTCCGC GCATATTTGA GTGTTTGCCC CAAAGGATTG ACCGTGAGAG CTTCCTGCTT GCACTTCACA
TGGCAGTGGA AGCTGATAAT CCATATTTTC GATTGGGTTA CAACAGCTTG GGTGCTTTTG CAACTATTAA CCATCTTCAC
TTCCAGGCTT ACTATTTGGC TCTGCCCTTT CCCATTGAGA AGGCCCCCAC CAAGAAAATT GCAAATTTAA ATGGTGGGGT
GAAGATATCT GAACTGTTGA AGTATCCTGT TAGAGGTCTT GTCTTTGAGG GTGGAGATAC TCTGGAAGAT TTATCAAATG
CTGTTTCAGA TGCTTGTATA TGTCTTCAAA ACAGTAATAT ACCGTTCAAT GTTCTTATTA CTGACTGTGG AAAGCAAGTC
TTTCTGTTAC CACAGTGTTA CGCAGAGAAA CAAGCTCTTG GAGAAGTGGA TGCTGAGCTT CTTGACACCC AAGTTAACCC
TGCTGTGTGG GAAATTAGTG GGCACATGGT TTTAAAGAGG AAGAAGGATT ATGATGAGGC TTCTGAAGGC AATGCTTGGA
GGCTTCTTGC TGAGGTATCC CTCTCCGAAG AGAGGTTCCA AGAGGTCAAC GACCTTATTT TTGAAGCCAT TGGCTGCAGT
GAATTGGACG ATAATGTTGA AGGTGACAAG GAAGTTGATG CAGTCAGCTC AAGTGCACAC TCTACTGTGG TGGTAGCTGG
TTCAAAAGAA TGTGTTGTTC TACAGTAACA AGGCTCTACT ACTATGAACA AAACTCATGG AATCTGCAGC ATTCTAAGAA
TAATTGCTGA ACTATTATAT CACCGTTTAA GTTGTAGTAC TGTGTTGTTC TTGAGCATTA AGGTCATGTG TTTTATGTAT
TTACCTTTTT TCATGTGGAA GTCGATGAAA TAACTACTCA CCTGAGTAGT GTTGGTGATT TGGGTGTATG GTAATATGCT
TGACTTGACT GTCTCTTGTG GCTTTCATGC TGCAAGAAAT AATAAATTCA GGTATCTGTT TGTTCAGGGC TAAATCAAAC
TGCAGCTTGA ATTCTCCAGA ATGAAACTTT CACTTGCTGT ATTTCGGGCT TCACTATGTA ATAAGTGTTA TGTTTGTATA
TTAATAAATG ATATTCTGAA TGTCTCTTGG GT

>Vigan.03G029100.01
ATGATGCTCA AAATCAAGAG GGTTCCTACT GTCGTTTCCA ACTACCAAAA AGATGATGTT GGAGACTCTT CTCGTCCCGT
CGGAGGTTGT GGTCGGAATT GCCTCAAAGC TTGCTGCATT CCAGATGCAA AACTTCCTCT GTATGCTTTT AAGAAGGTTA
ATGGAAAGGA TTTGGCTATG CATGAATGCG GGGAGCCTCC CGTGGCATTC CTGGACTCGC TTCTTCTTGG AGAGTGGGAA
GAACGCATGC AGAGAGGACT TTTCCGCTAT GATGTTACTG CCTGTGAAAC CAAGGTGATT CCTGGTGAAT ATGGTTTCGT
GGCTCAGCTT AATGAGGGTC GTCACCTCAA GAAGAGACCA ACTGAATTCC GAGTTGATAA GGTTCTGCAA CCATTCGATG
AAAACAAATT CAACTTTACG AAAGTTGGGC AAGAAGAGGT CATCTTCCAA TTTGAAGCTA GCGACGACGG AAAAATCCAG
TTCTTCCCAA ATGCTCCAGT TGATGTTGAT AATTCTCCCA GTTTTGTTGC CATCAATGTC AGTCCTATTG AGTATGGGCA
TGTTTTGCTG ATTCCGCGCA TATTTGAGTG TTTGCCCCAA AGGATTGACC GTGAGAGCTT CCTGCTTGCA CTTCACATGG
CAGTGGAAGC TGATAATCCA TATTTTCGAT TGGGTTACAA CAGCTTGGGT GCTTTTGCAA CTATTAACCA TCTTCACTTC
CAGGCTTACT ATTTGGCTCT GCCCTTTCCC ATTGAGAAGG CCCCCACCAA GAAAATTGCA AATTTAAATG GTGGGGTGAA
GATATCTGAA CTGTTGAAGT ATCCTGTTAG AGGTCTTGTC TTTGAGGGTG GAGATACTCT GGAAGATTTA TCAAATGCTG
TTTCAGATGC TTGTATATGT CTTCAAAACA GTAATATACC GTTCAATGTT CTTATTACTG ACTGTGGAAA GCAAGTCTTT
CTGTTACCAC AGTGTTACGC AGAGAAACAA GCTCTTGGAG AAGTGGATGC TGAGCTTCTT GACACCCAAG TTAACCCTGC
TGTGTGGGAA ATTAGTGGGC ACATGGTTTT AAAGAGGAAG AAGGATTATG ATGAGGCTTC TGAAGGCAAT GCTTGGAGGC
TTCTTGCTGA GGTATCCCTC TCCGAAGAGA GGTTCCAAGA GGTCAACGAC CTTATTTTTG AAGCCATTGG CTGCAGTGAA
TTGGACGATA ATGTTGAAGG TGACAAGGAA GTTGATGCAG TCAGCTCAAG TGCACACTCT ACTGTGGTGG TAGCTGGTTC
AAAAGAATGT GTTGTTCTAC AGTAA

>Vigan.03G029100.01
MMLKIKRVPT VVSNYQKDDV GDSSRPVGGC GRNCLKACCI PDAKLPLYAF KKVNGKDLAM HECGEPPVAF LDSLLLGEWE
ERMQRGLFRY DVTACETKVI PGEYGFVAQL NEGRHLKKRP TEFRVDKVLQ PFDENKFNFT KVGQEEVIFQ FEASDDGKIQ
FFPNAPVDVD NSPSFVAINV SPIEYGHVLL IPRIFECLPQ RIDRESFLLA LHMAVEADNP YFRLGYNSLG AFATINHLHF
QAYYLALPFP IEKAPTKKIA NLNGGVKISE LLKYPVRGLV FEGGDTLEDL SNAVSDACIC LQNSNIPFNV LITDCGKQVF
LLPQCYAEKQ ALGEVDAELL DTQVNPAVWE ISGHMVLKRK KDYDEASEGN AWRLLAEVSL SEERFQEVND LIFEAIGCSE
LDDNVEGDKE VDAVSSSAHS TVVVAGSKEC VVLQ*