GBrowse Details

Vigan.02G288000.01

Basic Information:
Name: Vigan.02G288000.01
Multiple alignment
Variant Information
Position: Chr02:39988004..39993046 (+ strand)
Length: 5043
Functional Information:
Description: Similar to Uncharacterized protein. [I1L248, Glycine max]
GO: Biological Process: transport (GO:0006810)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: membrane (GO:0016020)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: transporter activity (GO:0005215)
Molecular Function: transmembrane transporter activity (GO:0022857)
Molecular Function: substrate-specific transmembrane transporter activity (GO:0022891)
InterPro: Sugar/inositol transporter (IPR003663)
General substrate transporter (IPR005828)
Sugar transporter, conserved site (IPR005829)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Major facilitator superfamily domain (IPR020846)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:25.81,1.28,63.52,89.49,10.52,58.28,18.95,62.66
Arabidopsis thaliana homolog: AT1G30220.1, AT2G35740.1, AT4G16480.1
Automatic updates:
Name: NM_001361194 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative inositol transporter (LOC100796800), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:39988004..39988118 (+ strand)
Length: 115
Type: five_prime_UTR
Position: Chr02:39988119..39988251 (+ strand)
Length: 133
Type: CDS
Position: Chr02:39988647..39988717 (+ strand)
Length: 71
Type: CDS
Position: Chr02:39990420..39990755 (+ strand)
Length: 336
Type: CDS
Position: Chr02:39991222..39991329 (+ strand)
Length: 108
Type: CDS
Position: Chr02:39991411..39991998 (+ strand)
Length: 588
Type: CDS
Position: Chr02:39992267..39992740 (+ strand)
Length: 474
Type: CDS
Position: Chr02:39992741..39993046 (+ strand)
Length: 306
Type: three_prime_UTR

>Vigan.02G288000.01 class=Sequence position=Chr02:39988004..39993046 (+ strand)
ATACACTACC CATTGCAGTC TCTTCTCTCC GTATCTCAAA CTCAACACAC AACCTTTGCT CAAACAAAAA ACACCAACGT
TGTTTTTCCT CTTTCTCTTC TTCTTTTCTC TTCCCATGGA AGGAGGTGTG CCTGAGGCTG ATATCTCAGC TTTCAGAGAA
TGTTTATCTC TTTCATGGAA AAACCCTTAC GTTCTTCGCC TTGCTTTCTC TGCTGGAATC GGTGGTCTTC TCTTTGGTTA
TGACACTGGT AAATAACAGA AAAAGGAAAA AAAATCTAAC TTACCATACT CCATTTTTAA CCATTTTCTC CTCTCTCTCT
CTCAAAAAAA AACATCAAAA ATCTTGTTTT GTTTTTCCAG TTTCGTGTAA TGAAACAACC CTTTCCTCTG TTTCTCACCT
TCTCACCATT CCCACTTTCA TCTGCAAGCT TTTCTGAGTT CTAACCACAA AATCACTCAT TTATTATGTT GGAAACTGCT
GTATATTCTG GATCATATTA ATTATGATAG ATTAGTATAT TTCAAAAGGG TGCATGAGGT TTATTTTTAT CATATGATTA
ATATATTTAC ATAAGCAGAT AATAATATGA TTAGTGTTGT TATTATGGTT TGTTTGTAAT TGGGTTGATG ATTGTAAGTG
CAGGAGTTAT ATCTGGGGCT CTGTTGTATA TCAGAGATGA ATTCAAAGAA GTGGATAGAA AAACTTGGCT TCAGGTAATA
TTAATCTTTG ATGCAGTTTC AGTCTTTCAA TGAATTCAAA ATTCTTGTGA CTCCAAACCT ACTTTCATGG ACTTTAATGC
CCTTTCTTAC ATCTTCTCTG TTCTCAGCCA CCAACTTGCA CAAAAAACAA ACTCATCTTT TTCTATGTTT CAAACACTCA
TACTATTATA ATCCACATAT TCCATATTTT TACACACATG AGAAATAATA AATATATCTT TTTACATATA ATTTTTATTA
AAATAGCTTC CTCTTTTCAA GAAATATTCT CAATTTTAAA TAAAATAATT ATGATGGTCG TAATTAAGAA AAAAAAAAGT
ATTTCATCAT TTATTTTAGG GCAGATTAAA GAGATTAAAA CACTAACTAG TTTAGGAAGA AGATGAAAGT TTGTATTTGA
TAATCACCTG TCGTTTTTAC TAATTTTGAG GTAAGTTTTC GTTTTGCCGT ATTTAAATTG AAATTTTATT AAAAAGTAAA
TATTTTTGCC ACCAGAGTTA ACACAGAAAA TCGATCCAGT ATTTGGTAGT AAAGTTTTAT TTATTTTTTC TATTTTTCAT
ATTTTATTCA TAATTTACTG GGAGTGTGAA AACCATGACT TGGTTTCTCA GTGATATATT TTTCTTATTA TCTTTAAAGA
TAAATCTTAA CTTAGCACGA ATTAAGGGTT TTTTTTTCAA GATAATATTA TTTAATGTTC GTTCAAGAAC TTTTGAATTC
CATGATCCCG ATTCACGGGA TGAGATCCAG TTAATTAAAT TAACTATTAT TTAATATTAT TAAAGTAACC CAGTTTTTTT
ATTCCCATAA TTAACATTGC CCTTGCGTAT ATCTAAGCCC TGAATTCGGT TAATGCTTGT TTTAAGCTTT ATTTGCACAT
TAAATGAACT GCCGTCATGG ATTTGTTCCT TTCACGTTAG GATGCTTTGG AAAATGAACC TACCACAAAC CAAATACATG
GTCTGTGTTA ATCACACTGT AAAATATGAA ATAAATGCAA TTTATAGTTA TAAAAATCTA ATTTTAAAAT ATCATTTTAT
GGTGGGTGAT GTTTAATTAA TGAAAACCTT TAATTTTTAC AACAGTACTC TTTTACTTGA TTGGTAGAGT AAAATAGAAA
AGCAATATTT CTGGAGATGC GTGCGTATGA ATAAATGTTT TTTCATATAT TATAATACAA AATAATAATA ATAATAATAA
TAAATTGAAA AAGGGTATGA TCACCTGAAA AGTTGACATG TGTTAGCTGA AGAAATGTTC CGTTGGTCCC GTTGGGGTGT
TGGCCAACAA AGCAAAATCG AGCACCAGCT ACAGTAACCA CTGAAAATCC CCCAAATCCT AATTATATTC TTAACCTGCG
TAATCAATCA TCAAACAGTT AATTAAGAGA AGGAAGTAAC TTGTGGTTCA CTTTAGTTCT AATTTAGTTC CATTCTTTAA
TTACTACTAA ATGGCCTCTT ATCTGTGATA AAGGTCAGAT TTTTGTAATT TTTTTTTCAA TTTTACTTTT TTCATCTAAC
TGTTTGAGTT CAATTTCATG GTGTGCTGTA TAGTATGTGT CAATGAATTG GAATTGTGAG TAAATTACAA TTGGGGTGCC
ACAAATCTGA AACTGTGGTT CTTTGCTGTA AAAGAAATTT ATGGTGATGT GTGACTTTTG GTATTCTCAT TTTGTGTGAT
TTGTAAAAAA TCTCAGGAAG CCATAGTGAG TACTGCAATT GCTGGAGCAA TCATCGGGGC TTCAGTTGGA GGATGGATCA
ACGATCGATT TGGAAGAAAG AAAGGAATTG TTCTAGCAGA TATCCTCTTT TTTGTTGGGT CTGCTATTAT GGCTGCTGCG
AAAAGCCCAG CTGTTCTCAT TGTGGGTCGT GTGTTCGTTG GCATTGGTGT TGGTATGGCT TCAATGGCAT CGCCCCTCTA
CATTTCAGAG GCTTCACCAA CCCGAGTAAG AGGAGCCCTT GTGAGTCTCA ACAGTTTTCT CATCACTGGA GGACAGTTCC
TTTCATACCT CATCAACTTG GCCTTCACCA AGGTGGGAAA CTGTGCTGTC ACTTTTCACT TTCTTACAAA TTTTTCAGAC
ATGCCTGATC TATGTTGGTG TTCATTAAAT GGTTTTTTTC ATGCATGCGA TTCCCCGAGT GTCTCTGAAG CTGTTCTCTA
ATCAAAATTT ATAGTTTAAC CACTGAATCC ATGGGGTAAA GAGGGTAACT AGGGTGAAAC TTTTCTGATA CTGATTGAAA
AATAGTAATA AACACATATA AGGAAGGGCA TCCAAGTTTT TGTCATGTAT CTCTCCTTAT TGATAGTGTT AGATGGGCAT
TAGCTATTTA ACGTTTACTA GGAAAGAAAT TGAACATACA TGAGAGAATC CATTTCCATT TGCATACAGA AGGTTGGTTT
TAAAATTAAA ATGTGGTGGA TCATTGAACT TTTCTCTGGG TGTTCTTTTG TTCATCTAGT GTATGGTAAA TGAGTTTGTT
CATGTTTTTG TCATTCAGGC ACCAGGGACA TGGAGGTGGA TGTTAGGGGT AGCAGCAGCA CCAGCTTTGG TTCAAGTTGT
ATTAATGTTG ACACTCCCAG AATCACCTCG TTGGCTGTAC CGAAAGGTCG GATCATCATC GTTGATCAAT TTTCATTGAT
ACGTGAAACT GTAAATCTTA ATTGTTGTTA CATTTTTGTT CCCACAGGGT AGGGAAGAGG AGGCAAAAGC AATTCTGAAA
AAGATTTACC CGCCTAGCGA AGTTGAAAGT GAAATTCAGG CTTTGAAGGA ATCAGTTGAT ATGGAAATTA AGGAATCATC
AGAGAATGTC AGCTTGATCA AACTGTTGAG AACCCCAGCT GTGAGAAGAG GTTTATATGC AGGCATGGGT CTTCTAATCT
TCCAGCAGTT TGTGGGGATC AACACTGTGA TGTACTACAG CCCCACCATT GTTCAGTTAG CTGGTTTTGC ATCTAACAGA
ACAGCACTGC TTCTGTCACT CATCATAGCT GGTCTGAATG CATTTGGTTC AATTGTGAGT ATATACTTTA TTGACAAGAC
TGGGAGGAAA AAGCTTGCTC TGATCAGTTT GTGTGGAGTT GTGTTCTCCC TGGCTATGCT AACTGTCTCT TTTCGAGAAA
GTGAAATTCA TGCTCCAATG GTGAGTGCCA TTGGAACCTC TCAGTTCAAC AACACATGTC CTGATTACAA AGCAGCTCTG
AACCCTAATG AATGGAGTTG CATGACATGC CTAAAGGCTT CACCATCTTG TGGTTTTTGT GCTGCCGATG ACAAGGTACA
AATCCATTCC ACCCTTTTTC ATTTTGCCAA CACCATGTTT CGATTTTGCG GTTCACAAAA CTCTTACCAA TTACTGGGAG
GGAAGGGCTA GAAAACAAGT TATTTCAAGA CCACACATAA TGCATATGGC TGGATTTTGC ATGTCTAGCT ATTACTGTCA
ATTATTGGGA GGGAAAGCAA TGAAACAAGT TCTTTCAATT CCAAATGTTG ACAATAATTT TGCATTTTAT ATCCATTGAC
ACCAATTTCT GTTAAATTTG CAGCTTTTAC CCGGGGCATG TCTGATCTCC AATGTTATCA CAAAGAATTT GTGTGGCAGT
GATCATAGGG CATGGTACAC TAGGGGGTGT CCTAGCAAAT ATGGTTGGAC CGCCTTAGTA GGCCTTGCGC TTTACATAAT
TTTCTTCTCA CCTGGGATGG GAACTGTTCC ATGGGTTGTG AACTCTGAAA TCTATCCCTT GAGGTACAGA GGAATCTGTG
GAGGAATGGC ATCAACAACT GTTTGGATTT CCAACCTCAT TGTTTCAGAA TCCTTTTTGT CCTTGACAGA AGCTATTGGG
ACAGCGTGGA CATTCATGAT GTTTGGAATT GTAGCCGTTG TGGCCATTTT CTTTGTCGTT ATATATGTAC CTGAGACCAA
AGGGGTTCCA ATGGAAGAAG TGGAGAAGAT GCTGGAACAA AGATCATTGC AGTTTAAGTT TTGGCAGAAG AGATATTCTG
GCACTGAGAA GCACTGACTC AAACAAGAAC AAAGAACCTT GTTTGAGTCA TGTTTAGTTG TTGTAGCTTT AAATAGTGAA
TTAAGTGGCT TGTGAAATAT GGTATTGACA ATGGTTTCTT TGGGTAAGAT TTGTGATAGT TAGAATTTTA GCCCTAATGT
GTATGTAGTT GATTAGCTGG GTTGCTGAAA ATCCTTGTGA GATCCCTAGA GGATTGATAT TAAGTTCTTC TTTGTGAACT
AATAAAAAAT ATTAAATTAT TATCTATTGC TTTACATTTT CTTGAAACTT ATTCAATATA AAGAATTTGA TCTTCTAACG
TAA

>Vigan.02G288000.01
ATACACTACC CATTGCAGTC TCTTCTCTCC GTATCTCAAA CTCAACACAC AACCTTTGCT CAAACAAAAA ACACCAACGT
TGTTTTTCCT CTTTCTCTTC TTCTTTTCTC TTCCCATGGA AGGAGGTGTG CCTGAGGCTG ATATCTCAGC TTTCAGAGAA
TGTTTATCTC TTTCATGGAA AAACCCTTAC GTTCTTCGCC TTGCTTTCTC TGCTGGAATC GGTGGTCTTC TCTTTGGTTA
TGACACTGGA GTTATATCTG GGGCTCTGTT GTATATCAGA GATGAATTCA AAGAAGTGGA TAGAAAAACT TGGCTTCAGG
AAGCCATAGT GAGTACTGCA ATTGCTGGAG CAATCATCGG GGCTTCAGTT GGAGGATGGA TCAACGATCG ATTTGGAAGA
AAGAAAGGAA TTGTTCTAGC AGATATCCTC TTTTTTGTTG GGTCTGCTAT TATGGCTGCT GCGAAAAGCC CAGCTGTTCT
CATTGTGGGT CGTGTGTTCG TTGGCATTGG TGTTGGTATG GCTTCAATGG CATCGCCCCT CTACATTTCA GAGGCTTCAC
CAACCCGAGT AAGAGGAGCC CTTGTGAGTC TCAACAGTTT TCTCATCACT GGAGGACAGT TCCTTTCATA CCTCATCAAC
TTGGCCTTCA CCAAGGCACC AGGGACATGG AGGTGGATGT TAGGGGTAGC AGCAGCACCA GCTTTGGTTC AAGTTGTATT
AATGTTGACA CTCCCAGAAT CACCTCGTTG GCTGTACCGA AAGGGTAGGG AAGAGGAGGC AAAAGCAATT CTGAAAAAGA
TTTACCCGCC TAGCGAAGTT GAAAGTGAAA TTCAGGCTTT GAAGGAATCA GTTGATATGG AAATTAAGGA ATCATCAGAG
AATGTCAGCT TGATCAAACT GTTGAGAACC CCAGCTGTGA GAAGAGGTTT ATATGCAGGC ATGGGTCTTC TAATCTTCCA
GCAGTTTGTG GGGATCAACA CTGTGATGTA CTACAGCCCC ACCATTGTTC AGTTAGCTGG TTTTGCATCT AACAGAACAG
CACTGCTTCT GTCACTCATC ATAGCTGGTC TGAATGCATT TGGTTCAATT GTGAGTATAT ACTTTATTGA CAAGACTGGG
AGGAAAAAGC TTGCTCTGAT CAGTTTGTGT GGAGTTGTGT TCTCCCTGGC TATGCTAACT GTCTCTTTTC GAGAAAGTGA
AATTCATGCT CCAATGGTGA GTGCCATTGG AACCTCTCAG TTCAACAACA CATGTCCTGA TTACAAAGCA GCTCTGAACC
CTAATGAATG GAGTTGCATG ACATGCCTAA AGGCTTCACC ATCTTGTGGT TTTTGTGCTG CCGATGACAA GCTTTTACCC
GGGGCATGTC TGATCTCCAA TGTTATCACA AAGAATTTGT GTGGCAGTGA TCATAGGGCA TGGTACACTA GGGGGTGTCC
TAGCAAATAT GGTTGGACCG CCTTAGTAGG CCTTGCGCTT TACATAATTT TCTTCTCACC TGGGATGGGA ACTGTTCCAT
GGGTTGTGAA CTCTGAAATC TATCCCTTGA GGTACAGAGG AATCTGTGGA GGAATGGCAT CAACAACTGT TTGGATTTCC
AACCTCATTG TTTCAGAATC CTTTTTGTCC TTGACAGAAG CTATTGGGAC AGCGTGGACA TTCATGATGT TTGGAATTGT
AGCCGTTGTG GCCATTTTCT TTGTCGTTAT ATATGTACCT GAGACCAAAG GGGTTCCAAT GGAAGAAGTG GAGAAGATGC
TGGAACAAAG ATCATTGCAG TTTAAGTTTT GGCAGAAGAG ATATTCTGGC ACTGAGAAGC ACTGACTCAA ACAAGAACAA
AGAACCTTGT TTGAGTCATG TTTAGTTGTT GTAGCTTTAA ATAGTGAATT AAGTGGCTTG TGAAATATGG TATTGACAAT
GGTTTCTTTG GGTAAGATTT GTGATAGTTA GAATTTTAGC CCTAATGTGT ATGTAGTTGA TTAGCTGGGT TGCTGAAAAT
CCTTGTGAGA TCCCTAGAGG ATTGATATTA AGTTCTTCTT TGTGAACTAA TAAAAAATAT TAAATTATTA TCTATTGCTT
TACATTTTCT TGAAACTTAT TCAATATAAA GAATTTGATC TTCTAACGTA A

>Vigan.02G288000.01
ATGGAAGGAG GTGTGCCTGA GGCTGATATC TCAGCTTTCA GAGAATGTTT ATCTCTTTCA TGGAAAAACC CTTACGTTCT
TCGCCTTGCT TTCTCTGCTG GAATCGGTGG TCTTCTCTTT GGTTATGACA CTGGAGTTAT ATCTGGGGCT CTGTTGTATA
TCAGAGATGA ATTCAAAGAA GTGGATAGAA AAACTTGGCT TCAGGAAGCC ATAGTGAGTA CTGCAATTGC TGGAGCAATC
ATCGGGGCTT CAGTTGGAGG ATGGATCAAC GATCGATTTG GAAGAAAGAA AGGAATTGTT CTAGCAGATA TCCTCTTTTT
TGTTGGGTCT GCTATTATGG CTGCTGCGAA AAGCCCAGCT GTTCTCATTG TGGGTCGTGT GTTCGTTGGC ATTGGTGTTG
GTATGGCTTC AATGGCATCG CCCCTCTACA TTTCAGAGGC TTCACCAACC CGAGTAAGAG GAGCCCTTGT GAGTCTCAAC
AGTTTTCTCA TCACTGGAGG ACAGTTCCTT TCATACCTCA TCAACTTGGC CTTCACCAAG GCACCAGGGA CATGGAGGTG
GATGTTAGGG GTAGCAGCAG CACCAGCTTT GGTTCAAGTT GTATTAATGT TGACACTCCC AGAATCACCT CGTTGGCTGT
ACCGAAAGGG TAGGGAAGAG GAGGCAAAAG CAATTCTGAA AAAGATTTAC CCGCCTAGCG AAGTTGAAAG TGAAATTCAG
GCTTTGAAGG AATCAGTTGA TATGGAAATT AAGGAATCAT CAGAGAATGT CAGCTTGATC AAACTGTTGA GAACCCCAGC
TGTGAGAAGA GGTTTATATG CAGGCATGGG TCTTCTAATC TTCCAGCAGT TTGTGGGGAT CAACACTGTG ATGTACTACA
GCCCCACCAT TGTTCAGTTA GCTGGTTTTG CATCTAACAG AACAGCACTG CTTCTGTCAC TCATCATAGC TGGTCTGAAT
GCATTTGGTT CAATTGTGAG TATATACTTT ATTGACAAGA CTGGGAGGAA AAAGCTTGCT CTGATCAGTT TGTGTGGAGT
TGTGTTCTCC CTGGCTATGC TAACTGTCTC TTTTCGAGAA AGTGAAATTC ATGCTCCAAT GGTGAGTGCC ATTGGAACCT
CTCAGTTCAA CAACACATGT CCTGATTACA AAGCAGCTCT GAACCCTAAT GAATGGAGTT GCATGACATG CCTAAAGGCT
TCACCATCTT GTGGTTTTTG TGCTGCCGAT GACAAGCTTT TACCCGGGGC ATGTCTGATC TCCAATGTTA TCACAAAGAA
TTTGTGTGGC AGTGATCATA GGGCATGGTA CACTAGGGGG TGTCCTAGCA AATATGGTTG GACCGCCTTA GTAGGCCTTG
CGCTTTACAT AATTTTCTTC TCACCTGGGA TGGGAACTGT TCCATGGGTT GTGAACTCTG AAATCTATCC CTTGAGGTAC
AGAGGAATCT GTGGAGGAAT GGCATCAACA ACTGTTTGGA TTTCCAACCT CATTGTTTCA GAATCCTTTT TGTCCTTGAC
AGAAGCTATT GGGACAGCGT GGACATTCAT GATGTTTGGA ATTGTAGCCG TTGTGGCCAT TTTCTTTGTC GTTATATATG
TACCTGAGAC CAAAGGGGTT CCAATGGAAG AAGTGGAGAA GATGCTGGAA CAAAGATCAT TGCAGTTTAA GTTTTGGCAG
AAGAGATATT CTGGCACTGA GAAGCACTGA 

>Vigan.02G288000.01
MEGGVPEADI SAFRECLSLS WKNPYVLRLA FSAGIGGLLF GYDTGVISGA LLYIRDEFKE VDRKTWLQEA IVSTAIAGAI
IGASVGGWIN DRFGRKKGIV LADILFFVGS AIMAAAKSPA VLIVGRVFVG IGVGMASMAS PLYISEASPT RVRGALVSLN
SFLITGGQFL SYLINLAFTK APGTWRWMLG VAAAPALVQV VLMLTLPESP RWLYRKGREE EAKAILKKIY PPSEVESEIQ
ALKESVDMEI KESSENVSLI KLLRTPAVRR GLYAGMGLLI FQQFVGINTV MYYSPTIVQL AGFASNRTAL LLSLIIAGLN
AFGSIVSIYF IDKTGRKKLA LISLCGVVFS LAMLTVSFRE SEIHAPMVSA IGTSQFNNTC PDYKAALNPN EWSCMTCLKA
SPSCGFCAAD DKLLPGACLI SNVITKNLCG SDHRAWYTRG CPSKYGWTAL VGLALYIIFF SPGMGTVPWV VNSEIYPLRY
RGICGGMAST TVWISNLIVS ESFLSLTEAI GTAWTFMMFG IVAVVAIFFV VIYVPETKGV PMEEVEKMLE QRSLQFKFWQ
KRYSGTEKH*