GBrowse Details

Vigan.02G118500.01

Basic Information:
Name: Vigan.02G118500.01
Multiple alignment
Variant Information
Position: Chr02:10040141..10042837 (- strand)
Length: 2697
Functional Information:
Description: Similar to 14-3-3 protein. [Q93XW1, Phaseolus angularis]
GO: Molecular Function: protein domain specific binding (GO:0019904)
InterPro: 14-3-3 protein (IPR000308)
14-3-3 protein, conserved site (IPR023409)
14-3-3 domain (IPR023410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:145.24,92.75,161.07,154.52,222.21,29 1.15,147.09,186.84
Arabidopsis thaliana homolog: AT1G78300.1
Automatic updates:
Name: NM_001251460 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 14-3-3 protein SGF14h (SGF14h), mRNA.
PubMed ID: 21120521 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:10040141..10040580 (- strand)
Length: 440
Type: three_prime_UTR
Position: Chr02:10040581..10040634 (- strand)
Length: 54
Type: CDS
Position: Chr02:10040724..10040840 (- strand)
Length: 117
Type: CDS
Position: Chr02:10041383..10041505 (- strand)
Length: 123
Type: CDS
Position: Chr02:10041860..10042345 (- strand)
Length: 486
Type: CDS
Position: Chr02:10042346..10042837 (- strand)
Length: 492
Type: five_prime_UTR

>Vigan.02G118500.01 class=Sequence position=Chr02:10040141..10042837 (- strand)
GTTCAATTCA TTCAAAGTTG AAACTTTTGA AACCAACGAA AAAGAATATT ATTCCTGGTC GTAGATTGAA TTAAAAAGAG
GGAGATTCGT AAATGCCAGA GTGTGGGTGA GAGAGAGAGA GAGAGAGAGA GGGACTCACC AACCTTTTCG CCACACAACA
ACAACACAGA GTATCAAAAC CCCCTGTCAA TGACAGCTGT CTCTTTTCCT TATTTTGAAT TTAAATTTTA AATTACAACA
ACGATATTTT CCAATTTTCA GATATTAAAA TTATTTCTAA ATAAAAATCC CCCATCCAAC GGTCCATATT CTATCGCCAA
AACGACCCCA CCCACGCTTC TCAAAACGCA ATTATCGGAC GCATTACCCT CAAAACCACC CTTTCCCTTT CGTCGATCTC
CGTCTCCCTC ATCGTTTTCT CCCTCTCTCT GTCTCTCTCT TTGTCCCTCT TTAATCCCTA ACCAGATCTC GCTCTCTCTC
CAAGATTCGA CAATGGCGGC CGCTCCTACG CCTCGCGAAG AGAACGTGTA CATGGCGAAG CTCGCTGAGC AGGCCGAGCG
CTACGAAGAG ATGGTGGAGT TCATGGAGAA GGTGTCCGCT GCCGCAGACA ACGAGGAACT CAACGTCGAA GAGAGGAATC
TCCTCTCTGT AGCCTACAAG AACGTGATCG GAGCGCGCCG CGCCTCGTGG CGCATCATCT CCTCGATCGA GCAGAAGGAA
GAGAGCCGCG GCAACGAGGA TCACGTCACC GTCATCCGCG ACTACCGATC CAAGATCGAG TCCGAGCTCT CCAACATCTG
CGACGGTATT CTCAAGCTCC TCGACTCTCG CCTTATTCCC TCGGCTTCCT CCGGCGATTC TAAGGTATTC TACCTCAAGA
TGAAGGGCGA TTACCACAGG TACCTCGCCG AGTTCAAGAC CGGCGCTGAG CGCAAGGAGG CTGCCGAGAG CACTCTCGCT
GCATACAAAT CGGCTCAGGT TCGCCCTTTT TTTCCCTTTC CATTTCTTTT TTTTTACTGA TTTCTTGATT CAGATCTACT
CGATTTATTA TCCAAACTTG CATTTATGGC TTGTAATTTT ACGATTTTTG TTAACCTGTT TGTGAAATCT GCACGATTTA
GTCGGTGCGA TTTTTTGGAG CGGTTAAGCA TGATTCGTTT TAAATGTTTT CGCTAATATT AGTTTTAACT GCTAATCTTT
TGCAACTGCA TATGAAATAT TTGTGCGTTT AAATTCTGAA CAATTTGAAT TGAACGATAT TCGTTCTAGT TTTTTTTCTT
CTATCTTTTT ATTTATTGCT TTGAAGTATA AACGTGTTTC GTTGTTTTGT AGGACATTGC AAATGCCGAA CTGCCTCCAA
CTCATCCAAT TAGGCTCGGC CTTGCTCTGA ACTTCTCCGT ATTTTACTAT GAAATCCTTA ACTCTCCTGA TCGCGCCTGC
AACCTTGCAA AACAGGTTAG ATTTAGAGAA TATTTTGGCC TTTGTATATA TGTTTGTGGT TACTATATTT GAGCAGAGTT
TTCGATGTTT TCCGGAGAAA AGGATGGAAT TGGGCCCCCT GCAATGAAGT CTGCAGCTAT TATTGTCCAT TAATAATTAT
GTCAAGTCCA AATTGTAACT CTTTAATGTT GAAGCAACAA TGATGTTACT TGTTGGATTC TAGCGTCTAA ATATGGAACA
TGGAGTTTTC TTTGTATACT TGTTGATACT TTACCTGTAG CTATAATGAG TTGTCAAATG TTTATTGGAT TTCACAATGA
AGTTTGGGGG TCTAAAAATT ATAGCTAGCT TACAATCGAT CAACACTTGA TTACTTTATC TGGATACTAT AAAGATGGGG
TACCTGACCT GAGTACCATG GACTATATTA TTTTTAGTCT CTGTTATGAA AGTTTTCTGA AACCAGTTGC AAGAGCACAA
CTTTACTGTG AGATGTTCTG TTTTGATGGC ATATTTCGAA CTAATGATAG AATCTTTATC CTTTTGATAT GCACTAGGCT
TTTGATGAAG CGATTGCTGA ATTGGATACA CTGGGAGAGG AATCATACAA GGATAGCACT TTGATCATGC AACTGCTTCG
TGATAACCTC ACCCTTTGGA CCTCGGACAT GCAGGTATTG ATTTTAGTTT GCCTAAGTTC GTCCTTCGCT TTTTTTTCGT
ATTCTTATCA ACAACTTATT GATGAAATTT ACTGTGCTTT CAGGATGATG GAGCAGATGA AATTAAAGAA GCAGCACCGA
AACAGGATGA TCAGTAGAGA TGTTTTACTG CTAATTAGAA TTGAACTTCT CCTCTATATC TTTTTGAAGG GAGGTGTTTG
TTGCTATATC TTTGATGCTG GAATTTTAGG CATTCATGTC TGTTATGAAT TGTGGATGTA CTGGGCCGTT TTAGTTTGTC
CTTCCATTTT CAAGTGTTTT CCAAATTGCC TATTTTATTA AGGACGCTGA AGTTTTTATT TTACGGAATT GGAATTTTAA
GATTCTCTTC TATCTAGTAA ACTTGTTTTG TTGGAATTGG TTTATGGTTT TGTACGTTTA ATTATTCTGA GGATTGTACA
TTTCATTCTC TGAAATAGAA GGTCTGTTCG AGATCACTAA AGAACTTCTG CCCGTATTTT TGAGCATTTA TATTTGTGAG
TTGAATTTTT AATTTCTAAT TATGGTATTT GTATTTCTTT TAACAATTCT AGCAATG

>Vigan.02G118500.01
GTTCAATTCA TTCAAAGTTG AAACTTTTGA AACCAACGAA AAAGAATATT ATTCCTGGTC GTAGATTGAA TTAAAAAGAG
GGAGATTCGT AAATGCCAGA GTGTGGGTGA GAGAGAGAGA GAGAGAGAGA GGGACTCACC AACCTTTTCG CCACACAACA
ACAACACAGA GTATCAAAAC CCCCTGTCAA TGACAGCTGT CTCTTTTCCT TATTTTGAAT TTAAATTTTA AATTACAACA
ACGATATTTT CCAATTTTCA GATATTAAAA TTATTTCTAA ATAAAAATCC CCCATCCAAC GGTCCATATT CTATCGCCAA
AACGACCCCA CCCACGCTTC TCAAAACGCA ATTATCGGAC GCATTACCCT CAAAACCACC CTTTCCCTTT CGTCGATCTC
CGTCTCCCTC ATCGTTTTCT CCCTCTCTCT GTCTCTCTCT TTGTCCCTCT TTAATCCCTA ACCAGATCTC GCTCTCTCTC
CAAGATTCGA CAATGGCGGC CGCTCCTACG CCTCGCGAAG AGAACGTGTA CATGGCGAAG CTCGCTGAGC AGGCCGAGCG
CTACGAAGAG ATGGTGGAGT TCATGGAGAA GGTGTCCGCT GCCGCAGACA ACGAGGAACT CAACGTCGAA GAGAGGAATC
TCCTCTCTGT AGCCTACAAG AACGTGATCG GAGCGCGCCG CGCCTCGTGG CGCATCATCT CCTCGATCGA GCAGAAGGAA
GAGAGCCGCG GCAACGAGGA TCACGTCACC GTCATCCGCG ACTACCGATC CAAGATCGAG TCCGAGCTCT CCAACATCTG
CGACGGTATT CTCAAGCTCC TCGACTCTCG CCTTATTCCC TCGGCTTCCT CCGGCGATTC TAAGGTATTC TACCTCAAGA
TGAAGGGCGA TTACCACAGG TACCTCGCCG AGTTCAAGAC CGGCGCTGAG CGCAAGGAGG CTGCCGAGAG CACTCTCGCT
GCATACAAAT CGGCTCAGGA CATTGCAAAT GCCGAACTGC CTCCAACTCA TCCAATTAGG CTCGGCCTTG CTCTGAACTT
CTCCGTATTT TACTATGAAA TCCTTAACTC TCCTGATCGC GCCTGCAACC TTGCAAAACA GGCTTTTGAT GAAGCGATTG
CTGAATTGGA TACACTGGGA GAGGAATCAT ACAAGGATAG CACTTTGATC ATGCAACTGC TTCGTGATAA CCTCACCCTT
TGGACCTCGG ACATGCAGGA TGATGGAGCA GATGAAATTA AAGAAGCAGC ACCGAAACAG GATGATCAGT AGAGATGTTT
TACTGCTAAT TAGAATTGAA CTTCTCCTCT ATATCTTTTT GAAGGGAGGT GTTTGTTGCT ATATCTTTGA TGCTGGAATT
TTAGGCATTC ATGTCTGTTA TGAATTGTGG ATGTACTGGG CCGTTTTAGT TTGTCCTTCC ATTTTCAAGT GTTTTCCAAA
TTGCCTATTT TATTAAGGAC GCTGAAGTTT TTATTTTACG GAATTGGAAT TTTAAGATTC TCTTCTATCT AGTAAACTTG
TTTTGTTGGA ATTGGTTTAT GGTTTTGTAC GTTTAATTAT TCTGAGGATT GTACATTTCA TTCTCTGAAA TAGAAGGTCT
GTTCGAGATC ACTAAAGAAC TTCTGCCCGT ATTTTTGAGC ATTTATATTT GTGAGTTGAA TTTTTAATTT CTAATTATGG
TATTTGTATT TCTTTTAACA ATTCTAGCAA TG

>Vigan.02G118500.01
ATGGCGGCCG CTCCTACGCC TCGCGAAGAG AACGTGTACA TGGCGAAGCT CGCTGAGCAG GCCGAGCGCT ACGAAGAGAT
GGTGGAGTTC ATGGAGAAGG TGTCCGCTGC CGCAGACAAC GAGGAACTCA ACGTCGAAGA GAGGAATCTC CTCTCTGTAG
CCTACAAGAA CGTGATCGGA GCGCGCCGCG CCTCGTGGCG CATCATCTCC TCGATCGAGC AGAAGGAAGA GAGCCGCGGC
AACGAGGATC ACGTCACCGT CATCCGCGAC TACCGATCCA AGATCGAGTC CGAGCTCTCC AACATCTGCG ACGGTATTCT
CAAGCTCCTC GACTCTCGCC TTATTCCCTC GGCTTCCTCC GGCGATTCTA AGGTATTCTA CCTCAAGATG AAGGGCGATT
ACCACAGGTA CCTCGCCGAG TTCAAGACCG GCGCTGAGCG CAAGGAGGCT GCCGAGAGCA CTCTCGCTGC ATACAAATCG
GCTCAGGACA TTGCAAATGC CGAACTGCCT CCAACTCATC CAATTAGGCT CGGCCTTGCT CTGAACTTCT CCGTATTTTA
CTATGAAATC CTTAACTCTC CTGATCGCGC CTGCAACCTT GCAAAACAGG CTTTTGATGA AGCGATTGCT GAATTGGATA
CACTGGGAGA GGAATCATAC AAGGATAGCA CTTTGATCAT GCAACTGCTT CGTGATAACC TCACCCTTTG GACCTCGGAC
ATGCAGGATG ATGGAGCAGA TGAAATTAAA GAAGCAGCAC CGAAACAGGA TGATCAGTAG 

>Vigan.02G118500.01
MAAAPTPREE NVYMAKLAEQ AERYEEMVEF MEKVSAAADN EELNVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG
NEDHVTVIRD YRSKIESELS NICDGILKLL DSRLIPSASS GDSKVFYLKM KGDYHRYLAE FKTGAERKEA AESTLAAYKS
AQDIANAELP PTHPIRLGLA LNFSVFYYEI LNSPDRACNL AKQAFDEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD
MQDDGADEIK EAAPKQDDQ*