GBrowse Details

Vigan.02G093200.01

Basic Information:
Name: Vigan.02G093200.01
Multiple alignment
Variant Information
Position: Chr02:7439509..7442305 (+ strand)
Length: 2797
Functional Information:
Description: Similar to Uncharacterized protein. [I3SSR9, Medicago truncatula]
InterPro: AIG2-like (IPR009288)
Butirosin biosynthesis, BtrG-like (IPR013024)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.35,1.40,18.60,52.96,30.82,15.11,12.56,16.85
Arabidopsis thaliana homolog: AT2G24390.1
Automatic updates:
Name: NM_001250311 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527521 (LOC100527521), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254496 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein AIG2-like (LOC100794072), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:7439509..7439608 (+ strand)
Length: 100
Type: five_prime_UTR
Position: Chr02:7439609..7439742 (+ strand)
Length: 134
Type: CDS
Position: Chr02:7439890..7439962 (+ strand)
Length: 73
Type: CDS
Position: Chr02:7440551..7440643 (+ strand)
Length: 93
Type: CDS
Position: Chr02:7440797..7440880 (+ strand)
Length: 84
Type: CDS
Position: Chr02:7441933..7442076 (+ strand)
Length: 144
Type: CDS
Position: Chr02:7442077..7442305 (+ strand)
Length: 229
Type: three_prime_UTR

>Vigan.02G093200.01 class=Sequence position=Chr02:7439509..7442305 (+ strand)
AAAAAACCGT TATCAACAAT CATACAGATG AGAAGATAGT TTTGGAAATA AAAGAGGGAG TAGTAGTAGA GAAGAGAGTG
AAGAGGAAGA AGAGAAAAAA ATGAGCGTAA ATGTGAATTG CGTGGGTGGC GTTACGCACA ACGTCTTCGT CTATGGTAGC
CTTCTGGCCG ATGAGGTTGT CCATACCCTC TTGAAGCGCC TTCCTCCGAC CACACCTGCC ATCCTTCACG ACCAGTTACT
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTGCAA CTCCTTCAAA TCACATTTTA
TACCTTTCAT TTTCATAACC AACGATTTTC CCCTTTCTTT CAATTGGTAT TTGATTTGCA GTCACAGATT TAAGATCAAA
GGTCGCGTTT ATCCCGCTGT TCTCCCCGTC CACAATGACA AAGTTAATGG CAGGGTATGT CTCTCTTTCT CCACATCCCT
CCTAATTATT CATCCATCTA TTTATTTCTC TCTCTCTAAA GCAAAATAAT TTCCATTCGC ATTTTTCCTA ACTCTTGCTG
TAATTTTTGT TTTATGTCTC TGCAATTTTT TATTTTACTT TTTTGGTTTA ATGTTTTTAT GCCTCGGAAA ATAAACAAGT
TCTATTTGTA GGTTAATGAT GTGTGCAAAC ACTGAATGCA AATTAGAATA TTTAAGAGAT GGATTTGTCT TCTTTCTTTC
TTTTTTGTAT ATACTTATGT TTGATGGTTT CTAATTTACT ACTTTTTTAA TTCTGGCTTT GCTTTTATAT TGCTTTTACT
TCTTCATCTT TCGTCTTTTT GAGGTTGTAC ATAACCTCTG CATTTTCTTT AAATGATTAC AGCTGTCTCT CTTATCAGGT
ATACGGTGTT ATGCTTCTCA AATAATTAAA GAATTTCATT ATGGTTTCTT TTTCTTCATA CAATTAAGAG GAATTATTGT
AAAAATTAGA AAGTAAGAAG TATCGCGTCT AATTTATGGA ACTTCGGTAT CGGTGTAATT TACTCTTGTT TTATTTGATC
AGGTGCTTCT TGGTTTATCG GGAGTTGAAC TGCATATTTT AGATGAGTTC GAGGATGATG AATATACTAG AACTGATGTT
GAGGTTTTCT TGGAGGTAAG TCTGGTTTAT TTCACTTTCT ATTCATCCTT TAACCTATTG CTAATTATTA TAACAAATGA
TGCAAACGTT ACGTTTCTCA AAAATATACT TATGATCTCA CTGATTGCTT TCTAGTCTCA GAAGAATTGA TGGTATATAT
TGTAACAGGA CAAGTCTGAA AAGATGCAAG TTTACGCATA TGTTTGGGGC AATAGAAATG ACCCCAACTT ATATTCAGAG
TGGGACTTTG AGGTGAGCAT GCCGTCTTTC TTATTCTCAT TTCCTCCACC CAGAATCAAT ATAAGAAAGT TTTGGGGACA
AAAGAAAAGC ATGAAATGAT CTTTAAATTT CAAACAAATT TATTCTTCTG TTTTCTTTAT ATTATGGAAA AATTAGTTAA
TGAGGCTTAT TTGTGACCGA GGAGCCTTGA CTGCTTGTGG TTGCATTCAA TGTTTTAAAT TGCAGTTATA TTCATGGTTG
CAATTTTGTT TCAATCTCTG ATGAGTGTAC AAACACATGC AGCCAATGTA GCCTCAATTT CATGGTCACG AAGGCCCTAA
GTATCTTGAC AATGTGGCCA CAATTGCAGT TGCGACTTTA TTTTTAAAAA ACCTTGATTA CGCTCTAAGA CTAAATAAAA
GAAATTTTGC CGCCGTGTAG CTTGGGGAAG ACAGGATTTC CAGATCATAT GAGAATGTTA TGCCTTAAAC CTTGTGTAAC
ATGAGTAATT GGCAACATAT AATTCAATTT CCTTGATGAT CAAGCTATGG CTACTTGTTT TTGTGCATAC AAATTAAAGG
CAGATGGCAT TATAGTAGTT AGAGTTAGGT GACTGCGAGA TAGTTGACCA CACCTCTCTT TATGCTTTCC TTCTTGTTTC
CCTCATGTTT ATGATTGGTT TTAAAGGATT GACAAAAGGA GTTCGTCCAG TTCTTCAAGC ATTTTGGTTC ATCTGTAGTT
TGCAGCATAA GTTTGATCTT GTAGACTTGT GATTAAGGAG GGAATTAACT TGTTGGGAGA GCTTTCTTGA TATTAGTTAA
AAACATTCCT TTTAAGGTTT AAAATCTTAA AGGCCTCACT CACTTTATGA TAACTTAATA TACATTGAAT AATGAGTATA
TGGTCATTTT GTCTGATATA CATAGTTCGT GTCAATGTCG TTAGATTTTA CATGTCGTAA CCTTAAATTT CTTGGTTTCC
AGTTCTATTT CAAATTAAGT ACCTTTTCAT GCATCCCCTA TGCTGAAATT CGTTTTATTT TTTCCATTTT CCTCTCTCAT
AATTCTGATT TTTGTATTTG GAAGGAATGG AAACAAATTC ACATGAATGA TTTCGTTAAG ATGACCAATA GCTTTATGGA
AGAATTGGAA TCGCCAGAAT CCAAGCCAAG GGTGCAGACT TATGAAGCCT TCTACAAGGA AGAAAAGGAT AAGCCACTTC
AACCTTGATG TTTACAGTTT GTAAAATTAT GCATTTTGTG CACTGAGCTG AGCTGTATGG TTCAATTAAG AATCATACTG
TTCACTGTTA ATAATTGTAA GTTCCTTTCC GAATCATATT TTGATAACCA AACAATGACA AGTTTATGCT ATATTGTATC
ATTATTATCT TCTAGGATTC AATAGAAATA TTTTATCACC CTTTCTCCAA AATAGATGTC CATATATACA TACATAG

>Vigan.02G093200.01
AAAAAACCGT TATCAACAAT CATACAGATG AGAAGATAGT TTTGGAAATA AAAGAGGGAG TAGTAGTAGA GAAGAGAGTG
AAGAGGAAGA AGAGAAAAAA ATGAGCGTAA ATGTGAATTG CGTGGGTGGC GTTACGCACA ACGTCTTCGT CTATGGTAGC
CTTCTGGCCG ATGAGGTTGT CCATACCCTC TTGAAGCGCC TTCCTCCGAC CACACCTGCC ATCCTTCACG ACCATCACAG
ATTTAAGATC AAAGGTCGCG TTTATCCCGC TGTTCTCCCC GTCCACAATG ACAAAGTTAA TGGCAGGGTG CTTCTTGGTT
TATCGGGAGT TGAACTGCAT ATTTTAGATG AGTTCGAGGA TGATGAATAT ACTAGAACTG ATGTTGAGGT TTTCTTGGAG
GACAAGTCTG AAAAGATGCA AGTTTACGCA TATGTTTGGG GCAATAGAAA TGACCCCAAC TTATATTCAG AGTGGGACTT
TGAGGAATGG AAACAAATTC ACATGAATGA TTTCGTTAAG ATGACCAATA GCTTTATGGA AGAATTGGAA TCGCCAGAAT
CCAAGCCAAG GGTGCAGACT TATGAAGCCT TCTACAAGGA AGAAAAGGAT AAGCCACTTC AACCTTGATG TTTACAGTTT
GTAAAATTAT GCATTTTGTG CACTGAGCTG AGCTGTATGG TTCAATTAAG AATCATACTG TTCACTGTTA ATAATTGTAA
GTTCCTTTCC GAATCATATT TTGATAACCA AACAATGACA AGTTTATGCT ATATTGTATC ATTATTATCT TCTAGGATTC
AATAGAAATA TTTTATCACC CTTTCTCCAA AATAGATGTC CATATATACA TACATAG

>Vigan.02G093200.01
ATGAGCGTAA ATGTGAATTG CGTGGGTGGC GTTACGCACA ACGTCTTCGT CTATGGTAGC CTTCTGGCCG ATGAGGTTGT
CCATACCCTC TTGAAGCGCC TTCCTCCGAC CACACCTGCC ATCCTTCACG ACCATCACAG ATTTAAGATC AAAGGTCGCG
TTTATCCCGC TGTTCTCCCC GTCCACAATG ACAAAGTTAA TGGCAGGGTG CTTCTTGGTT TATCGGGAGT TGAACTGCAT
ATTTTAGATG AGTTCGAGGA TGATGAATAT ACTAGAACTG ATGTTGAGGT TTTCTTGGAG GACAAGTCTG AAAAGATGCA
AGTTTACGCA TATGTTTGGG GCAATAGAAA TGACCCCAAC TTATATTCAG AGTGGGACTT TGAGGAATGG AAACAAATTC
ACATGAATGA TTTCGTTAAG ATGACCAATA GCTTTATGGA AGAATTGGAA TCGCCAGAAT CCAAGCCAAG GGTGCAGACT
TATGAAGCCT TCTACAAGGA AGAAAAGGAT AAGCCACTTC AACCTTGA

>Vigan.02G093200.01
MSVNVNCVGG VTHNVFVYGS LLADEVVHTL LKRLPPTTPA ILHDHHRFKI KGRVYPAVLP VHNDKVNGRV LLGLSGVELH
ILDEFEDDEY TRTDVEVFLE DKSEKMQVYA YVWGNRNDPN LYSEWDFEEW KQIHMNDFVK MTNSFMEELE SPESKPRVQT
YEAFYKEEKD KPLQP*