GBrowse Details

Vigan.02G051200.01

Basic Information:
Name: Vigan.02G051200.01
Multiple alignment
Variant Information
Position: Chr02:3851132..3854720 (+ strand)
Length: 3589
Functional Information:
Description: Similar to cytochrome b5-like. [XP_004501534.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:40.24,39.94,31.77,33.24,41.60,38.06,32.95,33.55
Automatic updates:
Name: NM_001252800 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100816659 (LOC100816659), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:3851132..3851300 (+ strand)
Length: 169
Type: five_prime_UTR
Position: Chr02:3851301..3851340 (+ strand)
Length: 40
Type: CDS
Position: Chr02:3851419..3851463 (+ strand)
Length: 45
Type: CDS
Position: Chr02:3853307..3853339 (+ strand)
Length: 33
Type: CDS
Position: Chr02:3854225..3854394 (+ strand)
Length: 170
Type: CDS
Position: Chr02:3854395..3854720 (+ strand)
Length: 326
Type: three_prime_UTR

>Vigan.02G051200.01 class=Sequence position=Chr02:3851132..3854720 (+ strand)
CGTACGTCTA GAAATTAAGG GGTACAGGAA GAAAAAGCCT GAAATAAAAA GGCTTCTCCA CTGAGGAATA GTTAATTGCA
TTTTGCTCTG ATTGGTTTGA TTAGGCCCTC CATAATGCCT TTTCCCTTTA CTCTGTATAC TCACTGGTAA AGAAAATAAG
AAATCAGAAA TGGTTATCAC AACCTTCAAC GGAGCTGGCG TTGGATTTGG TACGCCGTTT GAGTTTCGCC ATTTCTCCAT
ATTTCGAATC TCAATTCCTT TATCTCACGC GATAGTATTT TTTTCAGGTT TCGGCGTAGG TTGCGGTTTC GGTGTAGGAT
GGGGTTTCGG AGGTCGGTGG CAGCATGCTG CATTTATTTT TTCTGCTTTA CTTTCATTTC CAAATCGTTT TAATTGAATC
CTTTAAGATG TTTCTCTACC TTTTGATATC GTTTTCCGGT GCCATGGGAA TGCAATTTTT ATAGTCCCCG CTGTTTACAA
GGTCTTTTTA AGCTCTCAGA ATCTTGTAAG AGTCCTTGTT CGTGAGACTA TGCTGACAAT TTAGATGTAA TTTTAACATC
CTTTTTTTTT CGTGTTAATC TTGTCGTTCC AGCTGACTGT GTTGGTATAT GGTATTTTTT GAGTCTGGAT AATGGAGAGG
AGCGGGGAAA TCGAGTGAGG TGGATAGGCT TTAATCTTAA CTCAGTTTTT TGGCAGAGAA AAGAATGTGG TTGGACAAAG
AAATTTTAGT CTTATAATTT AGACCCGGTT TTGATTAGGT TTTTTCTAGC TATGTGAAGT ACTATTTGAT TTAAATGATA
GAGCTTTTTA AAAAGATAAA TAATGTAAGT TGATATTTTC TTTTTTGAGA AGTTTTGATT CATTTTTATC ACCTTGATTC
ATATTTCATC TTGGAATTTA TCCAAACTTG CTCTGAGCTC ATTTTCATAC CAAAGTTACT TATAATTGGC TAAATATGGT
TGTGTGGAGT GGAGAATATT GGACTACATT TTCTATCATC CCTCCTCGGT TCTATGTTAA TTTTCATTCC AAAATTTCAC
CGGATTTGCT TCAGCTAAAC CAATCACACT CCTCCCAAAT TCTGTCTATC TATTGTTACT TTCCCCTGTC AAGTCTTCTG
CGAAGTATCT GTCCTAGTTT CCTACCACCC TTTTCTATTT AGCTGAGTGT ATTGAATGAA CTTTTGCCCT CTAGCTGTCT
TAATCATTTC ACTACTACAT TCTCCAAAAT CTTGACACTC AATCTCCTGG ATACAAAGGT GATTTAGACA GTTCAGTTGA
GGATACAGAG TCCTTCGTAT CTGGGAACTG GAAGAAGCAA GGAACAGACT GTTGTGACTA GGGGCAGTTC AGAGGCAAAA
TATAGAGCAA TCACTGAAGG TGTGCCGGAC TGATCTAGAT AAATAGATTA CTTGAAGATT TATCTCTTCC AATTCATGAA
CCTGTGAAAC TCTTTAGTGA CACTGACAGC GATGCAGCCA AGGGCATAAT CCTTCTACTC TCGAATATAT GTAAAGAAAT
TCGCATGTAT GTTAATATCA AATACTAACA AATAACAACT ACTTTCGTCT TATTTAATGA AACTATCTTC AAAATATCGT
TCATTTGATT GGATTTTTAT GATCAATGAC ATTTTTTTTA TTCTTGATAT CAAATTCTGA TAAAGGGTAG ATCGGGGGCA
AATTAATTGT TAAACTAGAT TGATATAGTT AAATGATGTC TATTAACTTT CTTAATTACT ATGAGTTTTT TATTTGTTTA
TTGTCGGTTA AGAAGGGTTT GTTCATAATC CAATTAAACC TGATAAGATG AAGCATGTGA GGATTGACAG AAACTTAAAT
GCATCATATC CCAGGTACTG CATTGCAACC AAATTATAGG AAGTAGATAT GCTCACAAAG GTCTTGTGCA AATACTGATC
TAATGTTGGC TAGCTAGACC AACATCTATT TTATTCTAAG AGAATGAGAG CATCTCAATA ATAGGAAGGA TTTCACTCAA
GTATTCGATT TTTATTTTTA TTCCTGTAAC TTGCTGATTC CTTGTTAATT CTGTAAATAT TTATGGCTTT TGTTTTTTTC
TTTATATAGT GTATCTCTTC TTTTGAAATA GTACGAAGAT GAAATCATTT TCTTCATACT CTGGTCATAA TTTATGTATC
TGATCTGTTG CACAGGTATG CCATTGAACT TATTGGGTCT TGGTGCAGGT ACAATAAGCA TGAATCTGCT TTCTTTACTA
TTTCTAAGTT TTAATTTTCA GTATTCAATG GTTATGAATA TGACATGCTG CATGATGTGG GTAGCCTTTT TTTCTCCAAA
ACCTTCATCT TACAGGTTAC ATTTAAGGAC TTTTTCTTCG AAGGTGCTTT TGTTGGAAAT TGTTTTCTAA TTATTTACCC
TTCTGGTTTG TTGGTTAGTG CTAATACCTA CTAACCTTAT GGGATAGGAT TGCGATCATT GCTCTAACCC CCTCCTCCCT
AATATATATA TATATATGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTA GAAAATTACT CTGTTTCTTG TTTCCTAACT
CAAGTAATGT TGCCCTTTGC TATTTCTTGG TTTTAGTTCC ACTTATGATT TTTATGATTT TAGTTCCACG TTATTTCAAG
TACTTCTATA CCCAATTGTC TTTGGATTTC ATTTTTATGT TGAAATACAG TTACTTTTTT TTGTACGCGA CAATTGTTTA
CAATTTGTTT ATACCCAAAC AAAGTTGCCA ACCAATCCGG AAATGGACCA TTGTTTTCAT TTTGTCTGTT ACAATACTGT
GTATTGCTTT TATATTACAA TAAAGTTTAG ATCAAATTAA AATTCAGGTC ATTTACAAAG ACCATAAATA TATGTAACAG
TTATTTTCGT ATTTGTTTCT TTATTGCATG CTGTTACCAT GTCAATCTCA CATTTTACAA TGGTCATAGC CAATGAAATG
ACTGCACATA GAGTTTTTTT AGTGTCGCTA AATTGAAAAC ATGTATTATC TTCAAGGACC GAATTTTTTT AATCTTTTTT
TTTGAATTTG ACCTATCAAT ATCGAATTGG GTATGTTGGA TTTAATTTTT AAGGTGGAGG CTGTGGCGTT GGAGTAGGAC
TTGGTTGGGG GTTTGGTACT GCCTTTGGTA GCAAGTATCG GTCCTCACGG GTCACATTTC AAGGAGTGGA ATTTGATAGC
AAGGAGACAG TTAACAGCAA GGAGTTCTCA AAGCCCAGTA CAGAAGCTGG AGGTGCACGG TAGTGTTTCT ACTTTGTAAA
TTCCTGGTCG GCCTATGGAG ATAAATTGAA TTTGTAATAA CAAGAACATG TGGAGATTGC GACTTCCTTT CAAATTGTAG
CAGTTTTTGG ATAATGGCTG CCCCTAATGG TAATGTGATA TGTACGCATT TTTTATTTCA AGAAAACTAA TGGTGTGTTT
ATAGTCATGG AGTGAATATA GAGCTTTTGG TATTAGTACT GAATGTGTAC GCATTAGATG AGTTTGTTTG GTGGCATGGA
GATTGGAAGG AGAGAAGTAA AAAGTGAATC TGAATAGTAT TTTTATACAT TATTTTTTAT TTGTTTCTA

>Vigan.02G051200.01
CGTACGTCTA GAAATTAAGG GGTACAGGAA GAAAAAGCCT GAAATAAAAA GGCTTCTCCA CTGAGGAATA GTTAATTGCA
TTTTGCTCTG ATTGGTTTGA TTAGGCCCTC CATAATGCCT TTTCCCTTTA CTCTGTATAC TCACTGGTAA AGAAAATAAG
AAATCAGAAA TGGTTATCAC AACCTTCAAC GGAGCTGGCG TTGGATTTGG TTTCGGCGTA GGTTGCGGTT TCGGTGTAGG
ATGGGGTTTC GGAGGTATGC CATTGAACTT ATTGGGTCTT GGTGCAGGTG GAGGCTGTGG CGTTGGAGTA GGACTTGGTT
GGGGGTTTGG TACTGCCTTT GGTAGCAAGT ATCGGTCCTC ACGGGTCACA TTTCAAGGAG TGGAATTTGA TAGCAAGGAG
ACAGTTAACA GCAAGGAGTT CTCAAAGCCC AGTACAGAAG CTGGAGGTGC ACGGTAGTGT TTCTACTTTG TAAATTCCTG
GTCGGCCTAT GGAGATAAAT TGAATTTGTA ATAACAAGAA CATGTGGAGA TTGCGACTTC CTTTCAAATT GTAGCAGTTT
TTGGATAATG GCTGCCCCTA ATGGTAATGT GATATGTACG CATTTTTTAT TTCAAGAAAA CTAATGGTGT GTTTATAGTC
ATGGAGTGAA TATAGAGCTT TTGGTATTAG TACTGAATGT GTACGCATTA GATGAGTTTG TTTGGTGGCA TGGAGATTGG
AAGGAGAGAA GTAAAAAGTG AATCTGAATA GTATTTTTAT ACATTATTTT TTATTTGTTT CTA

>Vigan.02G051200.01
ATGGTTATCA CAACCTTCAA CGGAGCTGGC GTTGGATTTG GTTTCGGCGT AGGTTGCGGT TTCGGTGTAG GATGGGGTTT
CGGAGGTATG CCATTGAACT TATTGGGTCT TGGTGCAGGT GGAGGCTGTG GCGTTGGAGT AGGACTTGGT TGGGGGTTTG
GTACTGCCTT TGGTAGCAAG TATCGGTCCT CACGGGTCAC ATTTCAAGGA GTGGAATTTG ATAGCAAGGA GACAGTTAAC
AGCAAGGAGT TCTCAAAGCC CAGTACAGAA GCTGGAGGTG CACGGTAG

>Vigan.02G051200.01
MVITTFNGAG VGFGFGVGCG FGVGWGFGGM PLNLLGLGAG GGCGVGVGLG WGFGTAFGSK YRSSRVTFQG VEFDSKETVN
SKEFSKPSTE AGGAR*