GBrowse Details

Vigan.01G470600.01

Basic Information:
Name: Vigan.01G470600.01
Multiple alignment
Variant Information
Position: Chr01:59986145..59990249 (- strand)
Length: 4105
Functional Information:
Description: Similar to N-acetyltransferase, putative. [B9T4P8, Ricinus communis]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.53,2.50,4.09,18.12,0.89,3.36,1.91,3.51
Arabidopsis thaliana homolog: AT4G28030.1
Automatic updates:
Name: NM_001317675 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max N-acyltransferase superfamily protein (LOC100802268), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:59986145..59987354 (- strand)
Length: 1210
Type: three_prime_UTR
Position: Chr01:59987355..59987509 (- strand)
Length: 155
Type: CDS
Position: Chr01:59988765..59988885 (- strand)
Length: 121
Type: CDS
Position: Chr01:59989038..59989133 (- strand)
Length: 96
Type: CDS
Position: Chr01:59989596..59989751 (- strand)
Length: 156
Type: CDS
Position: Chr01:59989892..59990152 (- strand)
Length: 261
Type: CDS
Position: Chr01:59990153..59990249 (- strand)
Length: 97
Type: five_prime_UTR

>Vigan.01G470600.01 class=Sequence position=Chr01:59986145..59990249 (- strand)
ATTTAATTTA TTTACAATGG GTCTGGGCTG CAGTGAGAAA GAAAAAAGAA AGTAAAGGAA GAACTTAAGA GAGAAAGAAG
AGAGGATAAT ACAGAAAATG ACGCTTCTAT CTTTTCTCTG TTCCTGTCCT CCAGTAATTC CGCGCTCATG GTTTCCGTTG
ACGTCTAATA CAAGTGCTTT CTCCGTCAAT TTCAGGACCC AAATCCATTC CTCTGCTTCC ACCAACATTT TCACCCAAAA
TCTCGACACC ACTCTCTTAT CCATCGCTGA ATCTTTCTAC GAGGATGAGC TATGGGCCGC TGCCTGTCTC CGCGTCCGTT
CCTTCCATCA ATTCCGCCCT GACGCCTTCG GAGTCCGAGT CAGTCTCTCA TTCTAATCTT CTCCTTTTTT TCTTTAATGA
TCAAATTTAG ATTCTTGCTT CTTCTTGATT GAATTGAATT ATGATGAGGT AATGTAACAC GATGCATGCC GTATTTCGTG
TTTGTTAAGT TGTCTTAGGA TCATATGAGG TACTTGGCTG AGCGCGAGTT CGAAGCACTC AAGGAGCGTG TTTCGGGGAA
AAGAACGGGC TTCAGAAGAG TTTCTTGCAT TAACGCTTCC CTTCCATTGT CCCACATCGC TTCCCTCTCC CATGATTTAT
GCTCTTCTTG TAAGGTTTGT TTATTTCCTC CTTCCTTTCA TTCACGTCTC TCCGATTCCC TTCATTAATG GATTGCTCAA
TGCTAATCCT TCCGATATGT ATGTTTGGAG ATGAACATTT AGCAACTGCT AACTTCAGTC ATTGGTTAAG GAATTCAAAA
TAGAAAATTT TCAGTCAAAA GCATTATCAC TGTATTTTTT TATTGTCATT TTCAATGCAA TACTTGTTAT GTGAATTCCA
ATAACAAATT TCAATTTTTG ATTTGTGACC GGTGCCTTTA CACTGCAATA CTTGTATGAC CCATTATTGA TATTGCTACA
ATTAAATGAA GAGATATCAT ACCTATCTTT TTACTATGCT TAGATTTGTT GTAAAATTTA GTTCAAATCT TAATTCTACC
AAATAAACTG TCACAGGAGG GATTATCTCT GTGTATATAT GTTCTGTTTC TTGTTTCTTA ACATATCTAA CTGTAGTTTT
CTGCTAACGG AGAGGAGCGG ATTGTAGTTG CCACTCTTGA TCTTAATCAG TGCTTGAGCC TTCCTGATGA AATTGTGGGG
TTGAAGCCTG AGGTATTTTC CTATATCCCG ATGTCCAAAC TTGTATGCTT GTTTTTGCCT AGTAGAGATT TTGAGTTTTG
ACATGAAAAC TGGCAAATCG TCTCTCTGCT TTCTGATTTT GTACAGTGCC TCCGTGTAAC TGTTTAAATG TTTCACTGTT
ATAGGTCACT GGAGCTGATG TCACCAGGGC ATACCTCAGT AATGTATGTG TTGCTGAAGA GGTGCACAGA AATGGGTTGG
GTTATGCACT TCTTGAAGTG TCAAAGTTAG TAGCCTATGA TTGGGGTAAG AATCCAAAAA ACGTTTAACT GCTACGTTGA
TGTTGCTATC GTTTCTGCTG TCTTTAAAAG AGGTCAATTG ATGTGCACAC ACGAAGAATG CTAACAGTAT ATGCCCAACT
ACAGTTCTTC TAATACATCC TCTTTTATTG TTTAAAATAT TTGAAATTAC TGAATCACGA ATGAGACTCA AGTAAGTTTC
ATAAATCTAA ACAATAATAT AGTGTATTTT ACAAACAGTT ATCTTATGTG CACACACAAC ACTTATTTCT AAATCCTAAT
CTTTGTTTTG ATAAGGATTT TTTTTTTTAA TTTAGAATTT ATTTACACCC TCTCCAATTT TCACTCCTAT CAAGCAAAAT
CTTGAATGTT TGTTAATAAT TAGGAGTTCA TTCGGAAGTC TTGGAAATGA TTATTGATTG TACTACTCTG TTACGTGTTT
ACATTGGACT AATATTCCCG TAGCACTACA AAACGGTTAT TGTTGATGAT TGAACTTCTC ATGTCCTTTG TTAATCTCTC
TAAGAGCTTT TGTCTGCTAA AGTTCAACAA AGTATAAAAC TTCTCTTAAT TGTACTTTAC TCTGCATCTC AGGTTTTTAT
ACATAGTGAT TTCAACATAT ACTCGTGAGG AAGAAAAGAA AGCAATGCTT TTTTTAACAA AAAAGATTAT CAAATATTAT
CACTTATTGC ATGTCATTAC GTTGATGCTT TATTCAGTGG GTTAATATAT TGAGATCATT AAGGATATAA TTTTAGACGG
CCTTTTTTTA CTGAACTACT ACTCCATGGA TTCTGATCAT TCAGCTGTGT AAGAATCCGG CTATTTTTCA AAATTTTCTT
CCGTTTAGTT GGAGAACTCA TCCACAAGTG GTTGCAATTA CAGTTTTCGT TATGCATGGC TCAATTCAAA ATATTATCTA
GGGCAGCATT GCCAAGCACA ACGATCATAA TTTCCCCGCT AGTTATCTAT TACTGTTGAT GAGATTTTTG TTTAATTATT
TTCCAATGCC AAGAGTCAGA CATCATGGGA AACGATTGTG ATCTCTATTA TCCTTGCTCT GTGCTTAGTG AATATTCTTG
TGGACCATGA AGACTTCCCA TGTTGTAAAG CACTATTTGC GTTCATATAG TATTCTATTA TTTTTTTTTC CTTAACCATT
TTAGTTTATG AACGAGGACA TCCTGATTTC TACATGACAG TTCAGATTGG ACTTTCCTAG TCAAAGTGAC TACATTTACT
TATATTTATC GTTCTGTCAG GCATAACAGA TTTGTACGTC CATGTTGCTG TCGACAATGA ACCAGCAAAG AAATTGTATA
CGAAAAGTGG GTTTGTCTAT GAAAGTGATG AACCCGCGTG GCAGGCCCGG TTTCTGGATC GACCCCGAAG ACTTCTACTA
TGGTCAGGGC TTTGAAGGAC CTAATTTAAC AGTGTTGTCG TATATATCTC GTATGTATAT GGTTTACTGT CTATTCTTGT
CAAGTAATTT TCAAAACAGT CAATGTAACG TGTTTTGCCA TTTTAGCAAA TCTGATTGAC GAGGGTCGTC TTTAAGATAA
GATGGCATGG AATAGCTTCC CTTGATGATT ATATTAAGCA CACATTGTAA GGCTTAAAGC CTTAGAACAT TTGGGAACAT
TATAAGAACA TATCATAGTC AACTAGAAAG ATCAAATTCA TTTACTCCTA GTGTCTTTAT CTACCTCGAA AAATCCCGCG
AGTTGTAATT CATCAATGAA GATGATTTCT AAAAATATAT TGAAAGAGTA TTTACAAGAT TTCTACTTGA AATTTCCTGG
TAAGCAGTAA ATTAATGGAC AACATGAATT CATCATTCGA GGGACCAAAT TACTGGAGTC AAAATTTGGA TAGCAGCACG
TGAAACGATA AATTGAACTG TCACAAAGCC AAATTTGCTG GAGATCAGAT CAATATTCTA TCTTCTTCGA ACGTATACAA
CAACTGAAGC TTGAAGATCA CGATCTACCT TGAAGTGAGC GTTAAAAAAT CTTCTTCCCT GTTGTTGAAA TCCCAATGTT
AAATAAAAAG ATAAGGACAA ATACCAACAT TAAGATGAAT AAAAAAACTG AGAAATAAAC TTAGGACAGT CTAATCAATT
ACCTCCCTAT AATCAAATGA AATTAAAAGG TTCTTCAACT TTTGTTCTTC TGAGTCAAAT AAAACTATGT GGCTGGCCAT
AGACACATTT TTAGCATATT CAAACACAAA GGAAACAGGG TCCATCAAGA AACGGTCCGA CTCATCGGGG ACTCCTTTCT
CTTCACTGCT AAATAATATG CATTAACATG AATTATGAAC TTATTTAACT TCTAATCAAT ATTAGAAGCG ATGACAATTC
GAACTTCCAA ACCTTGGTGT GCAGTCCAGA AATTGCATTG GCAGGTTATG ATGTAGCATG GAATAGTATG GAGTCGCATG
GCAAGGAGTT AGGAATAGGA TGCTTCTCAC CTTCCCTTGA AGAGCTTCTC TAGCAAGATG GTTCATGACA TCCTCAGGTC
CTCTCTGTCA GAAAAGAAAA AATATATTGA ATATTGTAGG TTCTTACATA AGATTGCTTT GCTAAACTCT AGATACAATA
AACAAGCACA TCAAATTGAA AGAAG

>Vigan.01G470600.01
ATTTAATTTA TTTACAATGG GTCTGGGCTG CAGTGAGAAA GAAAAAAGAA AGTAAAGGAA GAACTTAAGA GAGAAAGAAG
AGAGGATAAT ACAGAAAATG ACGCTTCTAT CTTTTCTCTG TTCCTGTCCT CCAGTAATTC CGCGCTCATG GTTTCCGTTG
ACGTCTAATA CAAGTGCTTT CTCCGTCAAT TTCAGGACCC AAATCCATTC CTCTGCTTCC ACCAACATTT TCACCCAAAA
TCTCGACACC ACTCTCTTAT CCATCGCTGA ATCTTTCTAC GAGGATGAGC TATGGGCCGC TGCCTGTCTC CGCGTCCGTT
CCTTCCATCA ATTCCGCCCT GACGCCTTCG GAGTCCGAGA TCATATGAGG TACTTGGCTG AGCGCGAGTT CGAAGCACTC
AAGGAGCGTG TTTCGGGGAA AAGAACGGGC TTCAGAAGAG TTTCTTGCAT TAACGCTTCC CTTCCATTGT CCCACATCGC
TTCCCTCTCC CATGATTTAT GCTCTTCTTG TAAGTTTTCT GCTAACGGAG AGGAGCGGAT TGTAGTTGCC ACTCTTGATC
TTAATCAGTG CTTGAGCCTT CCTGATGAAA TTGTGGGGTT GAAGCCTGAG GTCACTGGAG CTGATGTCAC CAGGGCATAC
CTCAGTAATG TATGTGTTGC TGAAGAGGTG CACAGAAATG GGTTGGGTTA TGCACTTCTT GAAGTGTCAA AGTTAGTAGC
CTATGATTGG GGCATAACAG ATTTGTACGT CCATGTTGCT GTCGACAATG AACCAGCAAA GAAATTGTAT ACGAAAAGTG
GGTTTGTCTA TGAAAGTGAT GAACCCGCGT GGCAGGCCCG GTTTCTGGAT CGACCCCGAA GACTTCTACT ATGGTCAGGG
CTTTGAAGGA CCTAATTTAA CAGTGTTGTC GTATATATCT CGTATGTATA TGGTTTACTG TCTATTCTTG TCAAGTAATT
TTCAAAACAG TCAATGTAAC GTGTTTTGCC ATTTTAGCAA ATCTGATTGA CGAGGGTCGT CTTTAAGATA AGATGGCATG
GAATAGCTTC CCTTGATGAT TATATTAAGC ACACATTGTA AGGCTTAAAG CCTTAGAACA TTTGGGAACA TTATAAGAAC
ATATCATAGT CAACTAGAAA GATCAAATTC ATTTACTCCT AGTGTCTTTA TCTACCTCGA AAAATCCCGC GAGTTGTAAT
TCATCAATGA AGATGATTTC TAAAAATATA TTGAAAGAGT ATTTACAAGA TTTCTACTTG AAATTTCCTG GTAAGCAGTA
AATTAATGGA CAACATGAAT TCATCATTCG AGGGACCAAA TTACTGGAGT CAAAATTTGG ATAGCAGCAC GTGAAACGAT
AAATTGAACT GTCACAAAGC CAAATTTGCT GGAGATCAGA TCAATATTCT ATCTTCTTCG AACGTATACA ACAACTGAAG
CTTGAAGATC ACGATCTACC TTGAAGTGAG CGTTAAAAAA TCTTCTTCCC TGTTGTTGAA ATCCCAATGT TAAATAAAAA
GATAAGGACA AATACCAACA TTAAGATGAA TAAAAAAACT GAGAAATAAA CTTAGGACAG TCTAATCAAT TACCTCCCTA
TAATCAAATG AAATTAAAAG GTTCTTCAAC TTTTGTTCTT CTGAGTCAAA TAAAACTATG TGGCTGGCCA TAGACACATT
TTTAGCATAT TCAAACACAA AGGAAACAGG GTCCATCAAG AAACGGTCCG ACTCATCGGG GACTCCTTTC TCTTCACTGC
TAAATAATAT GCATTAACAT GAATTATGAA CTTATTTAAC TTCTAATCAA TATTAGAAGC GATGACAATT CGAACTTCCA
AACCTTGGTG TGCAGTCCAG AAATTGCATT GGCAGGTTAT GATGTAGCAT GGAATAGTAT GGAGTCGCAT GGCAAGGAGT
TAGGAATAGG ATGCTTCTCA CCTTCCCTTG AAGAGCTTCT CTAGCAAGAT GGTTCATGAC ATCCTCAGGT CCTCTCTGTC
AGAAAAGAAA AAATATATTG AATATTGTAG GTTCTTACAT AAGATTGCTT TGCTAAACTC TAGATACAAT AAACAAGCAC
ATCAAATTGA AAGAAG

>Vigan.01G470600.01
ATGACGCTTC TATCTTTTCT CTGTTCCTGT CCTCCAGTAA TTCCGCGCTC ATGGTTTCCG TTGACGTCTA ATACAAGTGC
TTTCTCCGTC AATTTCAGGA CCCAAATCCA TTCCTCTGCT TCCACCAACA TTTTCACCCA AAATCTCGAC ACCACTCTCT
TATCCATCGC TGAATCTTTC TACGAGGATG AGCTATGGGC CGCTGCCTGT CTCCGCGTCC GTTCCTTCCA TCAATTCCGC
CCTGACGCCT TCGGAGTCCG AGATCATATG AGGTACTTGG CTGAGCGCGA GTTCGAAGCA CTCAAGGAGC GTGTTTCGGG
GAAAAGAACG GGCTTCAGAA GAGTTTCTTG CATTAACGCT TCCCTTCCAT TGTCCCACAT CGCTTCCCTC TCCCATGATT
TATGCTCTTC TTGTAAGTTT TCTGCTAACG GAGAGGAGCG GATTGTAGTT GCCACTCTTG ATCTTAATCA GTGCTTGAGC
CTTCCTGATG AAATTGTGGG GTTGAAGCCT GAGGTCACTG GAGCTGATGT CACCAGGGCA TACCTCAGTA ATGTATGTGT
TGCTGAAGAG GTGCACAGAA ATGGGTTGGG TTATGCACTT CTTGAAGTGT CAAAGTTAGT AGCCTATGAT TGGGGCATAA
CAGATTTGTA CGTCCATGTT GCTGTCGACA ATGAACCAGC AAAGAAATTG TATACGAAAA GTGGGTTTGT CTATGAAAGT
GATGAACCCG CGTGGCAGGC CCGGTTTCTG GATCGACCCC GAAGACTTCT ACTATGGTCA GGGCTTTGA

>Vigan.01G470600.01
MTLLSFLCSC PPVIPRSWFP LTSNTSAFSV NFRTQIHSSA STNIFTQNLD TTLLSIAESF YEDELWAAAC LRVRSFHQFR
PDAFGVRDHM RYLAEREFEA LKERVSGKRT GFRRVSCINA SLPLSHIASL SHDLCSSCKF SANGEERIVV ATLDLNQCLS
LPDEIVGLKP EVTGADVTRA YLSNVCVAEE VHRNGLGYAL LEVSKLVAYD WGITDLYVHV AVDNEPAKKL YTKSGFVYES
DEPAWQARFL DRPRRLLLWS GL*