GBrowse Details

Vigan.01G453000.01

Basic Information:
Name: Vigan.01G453000.01
Multiple alignment
Variant Information
Position: Chr01:58387204..58389139 (+ strand)
Length: 1936
Functional Information:
Description: Similar to Uncharacterized protein. [I1MT74, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:34.57,36.33,43.52,23.93,79.21,123.90,97.99,23.53
Arabidopsis thaliana homolog: AT5G08040.1
Automatic updates:
Name: NM_001360433 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial import receptor subunit TOM5-like protein (LOC100800713), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:58387204..58387293 (+ strand)
Length: 90
Type: five_prime_UTR
Position: Chr01:58387294..58387380 (+ strand)
Length: 87
Type: CDS
Position: Chr01:58388728..58388805 (+ strand)
Length: 78
Type: CDS
Position: Chr01:58388806..58389139 (+ strand)
Length: 334
Type: three_prime_UTR

>Vigan.01G453000.01 class=Sequence position=Chr01:58387204..58389139 (+ strand)
GGAAAAAGCA AAACGAAAAA CGCAAAACCC AGAACCCTAA TACCAATCTC TCGTTTGTGG TGCTTTGCTT TTGCCTTTCC
TTCCACATCA ATGGCCGACT CTGTAGTTTC GATTCAGTAC CTCAAGGATT TCTTCAATTC TCAAATCTAC GACGATGAGA
AATGGGCCTT CAACGTGGTA ATCTCTCTGT CTAACGCATT CTTGTATTCG TTTCGCACCC GTCCCGTTCG TTTCGTTATC
CTTGCGTTCC TATTTGTTTT AAAACGTAAT TGGTTCCAAT ATAGATTGGT TTGATTGCTA TGTCATCAAA TGAAACTGCT
AGGGTCTGTA CCTTGTTTTT GTTCGATACA GGAGAATGGA ATCAAGCAAT GGTCCCAAGA GTGTTTTGAA GTTTTACAGT
TTTTATATGT GAAATGAGAC TCTTTTTGAA CTCTAGCTGT TCTGTGTGTT TTTATGCTAA GGTGATTAGG AAGAAACTTG
ATTTATTTAT TTATTGTGGT AATGGGTTGT CATTATCCCC GCCGCCCATG TTACTCATCG TTGCAACATA ATAGCTACGT
GACGAACCCA TGATTTTATA CCTTGTGGTG TTGGATCAGT TGTACCTGTC ATTTGGTGGG AATGCTATAT GGAGGTGGTT
CAATTCTTGA TTGAATTCGA AGATCCCATC CGAATTTATG GATTCTTTTG GGTTATGAAG CAACTGTTGA TTGCATTTGC
ATCTGTTCCA ATTACACGCC ACGCCTTTAT AAGTCGTTGT GTTGATGATC CTGTGGCTTT TGGGTATTTG TTCCTCTGGC
TAGCTGTTAC CGTTGTTTGT TATATTATAT TACTTTAATG TTTTGAAAAT GTCTGTCCTC TTCTCATTGA CTGCATCTTA
ATGACAATGG CATTGCCCTT TGTTCGTCTG AGAGAGAAAA TGAATGGGGA AAGAAAGAAC ATTTTGAAAT TTGAATTGAA
GAGAAAACCA AAGGAAAGAA TAATTTGAAT TTTTGTTTCT AACAGTCAAC TTTTCTCCTT TTTCCCGTTT CTATATTGTC
TCTTCTACTG AGCATAAGAG AATACATCAT TGTCCAGTTT TCCCCTCCTT TCTATTTCTC TTTTCCTCTC ACCCAAAGAG
AGCGTTAGTT TCGTAGGAAT TTAGGCGCAC TCTGTTGTGA AACATTATTA TCAGTTTTTC CAAGAAGCTC TTAAGACATG
ATGCACGATC TGTGATTATT GTAGAAAATA TAGTATGGGC AGTTGAACCC TATAAATTTC TTATCCTAGG AGTAATGGAT
AGATGCTGTA ACTTATTACC TATACTAGGC AACCACCGAA GTTTCTGGTT AATTAGGACA TTCATGAGCT TAGTTTTACA
GGAAATGCTG GTAGTAAGTG TGGTTGTAGA ACATGAATAA GATTGTTGCA CGGGCTATTT AGTGATTATT GCCGTTTAGT
TTTTACTTAA TTGTAAAGGT ATTTCTTCTT TAAGCTTGAT TTATCTTGAA TAAATGTTGA TTCTCTTCTT TATTTGGCAT
GTAGAAATTG CTGCGTGCTG CGGGACTTTT TGGAGGATCA ATAGTACTTA TGCGAAATTA TGGTGACCTT ATGGCAATCT
GAAAAAGTAG CACAAATGAC AAGTTCTCTG CCATGAGTTG CTATTATCTA CTTAAACAGT ATTGTGATGT CTAGGTTTTT
TGTTTTTGCT TTATTTTTCA GTAATTTGAA CATGAAGGAG CTTCATTGGC ATGACCATGA AGCCTTTGAT GAGCGATGAC
GATGCTTTTC CGAATGGTTA TGTTATAGTA CATTCACATT TCCTTTGGCA AAACATGTTT TGGATATAAA ATAACTATTT
TGGATGTTCA TAGATTTAAC TCAATTTGGT GTATAAAATA TAGTAGAAAG AAAAAAAAAT TATTATATAG TAGTTAGGTC
AAATCTCATC TGTACA

>Vigan.01G453000.01
GGAAAAAGCA AAACGAAAAA CGCAAAACCC AGAACCCTAA TACCAATCTC TCGTTTGTGG TGCTTTGCTT TTGCCTTTCC
TTCCACATCA ATGGCCGACT CTGTAGTTTC GATTCAGTAC CTCAAGGATT TCTTCAATTC TCAAATCTAC GACGATGAGA
AATGGGCCTT CAACGTGAAA TTGCTGCGTG CTGCGGGACT TTTTGGAGGA TCAATAGTAC TTATGCGAAA TTATGGTGAC
CTTATGGCAA TCTGAAAAAG TAGCACAAAT GACAAGTTCT CTGCCATGAG TTGCTATTAT CTACTTAAAC AGTATTGTGA
TGTCTAGGTT TTTTGTTTTT GCTTTATTTT TCAGTAATTT GAACATGAAG GAGCTTCATT GGCATGACCA TGAAGCCTTT
GATGAGCGAT GACGATGCTT TTCCGAATGG TTATGTTATA GTACATTCAC ATTTCCTTTG GCAAAACATG TTTTGGATAT
AAAATAACTA TTTTGGATGT TCATAGATTT AACTCAATTT GGTGTATAAA ATATAGTAGA AAGAAAAAAA AATTATTATA
TAGTAGTTAG GTCAAATCTC ATCTGTACA

>Vigan.01G453000.01
ATGGCCGACT CTGTAGTTTC GATTCAGTAC CTCAAGGATT TCTTCAATTC TCAAATCTAC GACGATGAGA AATGGGCCTT
CAACGTGAAA TTGCTGCGTG CTGCGGGACT TTTTGGAGGA TCAATAGTAC TTATGCGAAA TTATGGTGAC CTTATGGCAA
TCTGA

>Vigan.01G453000.01
MADSVVSIQY LKDFFNSQIY DDEKWAFNVK LLRAAGLFGG SIVLMRNYGD LMAI*