GBrowse Details

Vigan.01G379200.01

Basic Information:
Name: Vigan.01G379200.01
Multiple alignment
Variant Information
Position: Chr01:51755785..51759670 (+ strand)
Length: 3886
Functional Information:
Description: Similar to Uncharacterized protein. [I1MUZ6, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:60.54,42.77,121.93,99.02,159.66,225.13,96.37,93.28
Arabidopsis thaliana homolog: AT5G47570.1
Automatic updates:
Name: NM_001248564 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499749 (LOC100499749), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001349710 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NADH-ubiquinone oxidoreductase ASHI subunit family protein (LOC100306514), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:51755785..51755804 (+ strand)
Length: 20
Type: five_prime_UTR
Position: Chr01:51755805..51756032 (+ strand)
Length: 228
Type: CDS
Position: Chr01:51756121..51756207 (+ strand)
Length: 87
Type: CDS
Position: Chr01:51756318..51756413 (+ strand)
Length: 96
Type: CDS
Position: Chr01:51759268..51759324 (+ strand)
Length: 57
Type: CDS
Position: Chr01:51759325..51759670 (+ strand)
Length: 346
Type: three_prime_UTR

>Vigan.01G379200.01 class=Sequence position=Chr01:51755785..51759670 (+ strand)
CACAAATACT CCTCAAAACG ATGTCGCATA GTGAGCGAGT GACAGTAGCA TTAGGTTGTG TGGGAGAAGG AGAAGAAAGA
AGAAAAATCA GAAGGAGAAA ATCATCAACC ATGGCAGGGA GATTGACGAA CGTAGCATCA AGGATCTTGG GCGGAAACGG
TGTCGTTTAC CGATCTGTTG CTTCCTCTCT TCGCCTCCGC TCCGGCATGG GCCTCCCAGT CGGCAAGCAC TATATTCCTG
ACAAACCTGT ATATTTCGCT AAACTTATCT TATTCGATTT TTGATTTTTA ATAAAAGCTT AAAAACCAAC GTCTCTTTTG
AATTTGGGGC TTTCAGCTTC CCATGAACGA GGAACTTCTG TGGGACAACG GGACACCATT TCCCGAACCG TGCATAGATC
GTATTGCTGA CACTGTTGGA AAGGTATCTG TTTTTTCTTT GATCTTATTT TCGTATGGAA GTTTTGCGTT AATATTGATG
CATAGCATTG ATTTTTCCTT TTCTTTTTAT TTATTTATTT ATTTTGAAAT AAGTATGAAG CATTGGCCTG GCTGTGTGGG
GGATTAAGCT TTTTTGCGTC TCTGGGATTG TTGGCTGTGT GGAATGACAA AGCCTCCAAG ATACCGTTTG TAAGTCTTCT
ACTTTAACTT TATCCTTAAC CATTTCCTCT GAATTTATGC TCCGTGTAGA CTTTGATTTG ATTGTTTTGC TATTTTGTGT
GCGATTAGGA TGTTGCTTAT TTCAATTCTA TTATAGCATT TCTCAATAAA ATATTTTAAG GGAAGCTGAT AATGGTCGAC
ATTGATGAGT ATTAATGTAG GAAGTGTTCT AAATTTTGGT TGAATTGGAT TCTATTGTTC TTGTTTGTTG CTTAGGCGAT
GCACTTTTAG TTGTTATGTG TTTCTTTAAT TTATATCCTT TGAGCCTTGT GCAATTTTTA GTTGGGTGCT GGTTCTACTG
AACCTTGTAC ACACAGGACA AATAATTTAT GGCAAATCTA AGTACTAAAA TGTATAGAAT TGTGAAACAA ATTCATAATC
AATAATCAAA AGTCATACCC TAAGTTGACA TATGTCTAAA TTGTGGACAT ATCTATTATA TACTGAGATA AGCATTTTCT
TTAGTTATTT TCAAAATAAT CTCACCAACA AGGACGCTCA CTCCAGGACA AAAGCATATG ACATCCACAC CTAATTGGTC
ATAGCTTTTA TTGTGTAGAG TGTTGTGAAG GAATAAAAGA TACATAGAAG AGGAGGGTTG GATATGTGTG TATAAAACTA
CTTCAAAACC TTTTTTGTAA GATATATAAA TTTGAAATGG TTATACAAGC TTTTTGATAA GGGTAGGGAA GCAAGGGGAA
GAAGAAAAAA AAACACCCAA ATGTAACTTC TATGGTGTGG TGGTTCACTC AACTGAGCCA CACCGATCCC TTTTACAGCA
AATGTATATA CTAAGTTTAC AATGTTATAA GTATTCTCTA TGTCAGTATA GGCTACACCA ACAACAATCT CAATCTTAGA
TTGTCATTGC AAGTGTTATT TGTTCCCTAA GTCCCTCTAA GCTTTCTACA CTGTAGTAAT ATGTTCTACA TAGGATAACT
CACAATGCAA TTTTACTCTG CGCATCAAAC AATACGCCTT ATGAAACAAA GTGTGTTGTA CCTTCCAGTC AAGATTGAGT
GTAAGAAAAT TTTCAACAAC AAACTTACTG GAGATATTGA AAGAGAAAAT ATATTTGTTC TAATGAGCAT TGAATAAACG
TGTATATCTT CCTTGTTTCT TGTTCCTCAT TCAGTCTAAT AAGACAAAAA TGTGTATAGA GAATAAAAAA ATGACATCCC
TTTGCTTGAC AAATTGACCG AAGGAATCTG TATTTGTCCA ATCATAGAAT TTGTTCATAA TAAATGCAGA GGTATTTGGT
CACTGAAACA TATATATTAG AAGGGATTTT ATTTTATGGT TTGAAAAGCC ATGTTAGTGT GAAGTATGAA ACCACATAAT
CTAGAAAGGT TACACGTACA CAAATACGAA CTTGGTCCAT TTTAATATTT TAAGAGGAAT TACGCAGGAT GAGCATCGTT
TAATAATAAA TTGAACACTA TTTGAAAAAT TAACTCCTTT GTACCCTTTA ATTGGACTCT GATAAACCTA ATGGTTTAAT
GAAAAATTTT GAACTCTTAT TTTTGTTAAA CATATATTTA TGCATAAGGA TTAAATACCT CTGTCATTGA ACTAAGGTGG
ATCTGAAATG TGACACTTTA AGCTTCAAAA TTCTTGTAGA ATCTAGATCA ATTAATTGTC TTTGAGTGCT ATGTAGGTTG
CGTCATGTTG GGGTCTTGTC TTCAGAGAAG GGTCTGATTC ATTATGTTCT ATATATTTCT TTTTTTGATC AGCCATTATG
GGTCTATATA GGAAGCCTTA CTTTAATGGT ATAATGAACC AAAACCTTTA TGTCACTTCC ATTTTCAAAT AACAAAGCAA
TTGGCAAGGG ACATACAAAC ATGGGAGAAA TGCAGTAGGT GGAGGCAGAA CAAACCCAGA AGTTGAGGGA ATCACCACAT
ACAGTCCTCT CGGCACTTGC TGCAACTTTA AATTCTGATA TTCATTTGGC AGCCAAGGGT TAAGATTTTT TTTTTTCCTG
GGTTTAAAGT CAGCTGCTCT CTGATACATG GTATCAAGGA TTATTTTTTG TGGGTTTTCT CTGATTTGGT CTGGTTATTG
CCATATTTGG CACTTTGGGA TCTCATGATT GCACCAATAT CATATCATAG CATGCGAACT TGACGTGTTG AGGTCAAATT
AAGGGATTTA AGTTTGCAAA ATCACATGTT TGTATTTTGT CAACCATGAT GACATTGTAT GTCATAATTT GAACCTAGCG
TCTGATTGAA GATGTTATTA CACATTTTAA AATTGAAGAA AGCCTTCACT GTTCCTAGTG CCCTTTCAGA GGATAGGATA
TTGTTCCCCA TTCTCCAGCG TTGCTTTTAC ATAGTGTAAC AGCAACTTCC AGAATCATAT ATTGGGAGCA CAATCATATA
TTAGGAGCAC AGCATTCACA ATTCATATGC AATTAAAATG TATTCCAAAA ATTTGCTCTC TAGCTGCTAA TGGAAATCAA
ATTCCCTGCA TAGATTTTCA ACTAACCAAT GTTCTCGTTG TCCAAAATTT GTGATGTATG ATTCTATCGT TAAGTCTGGA
TTCAAACCTA AATTTTACGT TAAGCTAAAT TTGAACTCAT TTTTCTGTTT GGTTGAAAGA ATAGTACAGT TTGTTTGCTA
GAGTTGAGCA TGGTCATGGT CTATGGACTA ATGGAGGTCT CTGTCCTGCA TGTTATTGTT ATCGTCCATG TATCCCAATT
GCAATATTGC TTGCGCTACC TTTCCTTTGA TATTTTCCTC TTTTGATGTT TCATATTCAA TGATTTTTGT GTTGCTATTA
GTACTTGTGT TGATTGATTT ATCTGTTATT TGATTTGTAT CAGACACCCA AAGTATATCC GTATGACAAT CTGCGAGTGG
AGCTTGGTGG TGAACCGTAG GTAAATCGGA TGGGAAGTTA TTATTTGATG TAATTGTTCT TTTATGTTTA TCTTTGTAGT
TCAAAATAAG GGATCGTGGA GAAGACTTGC TAAATCCAAC TAATGGAAGG GCCGAATCTA GTTCTTGAGA TCGTTAATGC
TTAATTGCTC ATGATTGTGA GTAGGCCAGT ATTATGCGAG CTTGTGTTTC GATGTGTACT TATGAAATTG ATTTTGAAGC
ATAATTTTAC AAAATAATTT CAAGTGAACG TGATTTTCGT TTGGTATCAT GTATTTGAAA ATGATTTTGG CAAAGAATGT
TGTTTGGAAA TTTGATTGAG TGTGTAATTA CTTAAATGAG TTTCAA

>Vigan.01G379200.01
CACAAATACT CCTCAAAACG ATGTCGCATA GTGAGCGAGT GACAGTAGCA TTAGGTTGTG TGGGAGAAGG AGAAGAAAGA
AGAAAAATCA GAAGGAGAAA ATCATCAACC ATGGCAGGGA GATTGACGAA CGTAGCATCA AGGATCTTGG GCGGAAACGG
TGTCGTTTAC CGATCTGTTG CTTCCTCTCT TCGCCTCCGC TCCGGCATGG GCCTCCCAGT CGGCAAGCAC TATATTCCTG
ACAAACCTCT TCCCATGAAC GAGGAACTTC TGTGGGACAA CGGGACACCA TTTCCCGAAC CGTGCATAGA TCGTATTGCT
GACACTGTTG GAAAGTATGA AGCATTGGCC TGGCTGTGTG GGGGATTAAG CTTTTTTGCG TCTCTGGGAT TGTTGGCTGT
GTGGAATGAC AAAGCCTCCA AGATACCGTT TACACCCAAA GTATATCCGT ATGACAATCT GCGAGTGGAG CTTGGTGGTG
AACCGTAGGT AAATCGGATG GGAAGTTATT ATTTGATGTA ATTGTTCTTT TATGTTTATC TTTGTAGTTC AAAATAAGGG
ATCGTGGAGA AGACTTGCTA AATCCAACTA ATGGAAGGGC CGAATCTAGT TCTTGAGATC GTTAATGCTT AATTGCTCAT
GATTGTGAGT AGGCCAGTAT TATGCGAGCT TGTGTTTCGA TGTGTACTTA TGAAATTGAT TTTGAAGCAT AATTTTACAA
AATAATTTCA AGTGAACGTG ATTTTCGTTT GGTATCATGT ATTTGAAAAT GATTTTGGCA AAGAATGTTG TTTGGAAATT
TGATTGAGTG TGTAATTACT TAAATGAGTT TCAA

>Vigan.01G379200.01
ATGTCGCATA GTGAGCGAGT GACAGTAGCA TTAGGTTGTG TGGGAGAAGG AGAAGAAAGA AGAAAAATCA GAAGGAGAAA
ATCATCAACC ATGGCAGGGA GATTGACGAA CGTAGCATCA AGGATCTTGG GCGGAAACGG TGTCGTTTAC CGATCTGTTG
CTTCCTCTCT TCGCCTCCGC TCCGGCATGG GCCTCCCAGT CGGCAAGCAC TATATTCCTG ACAAACCTCT TCCCATGAAC
GAGGAACTTC TGTGGGACAA CGGGACACCA TTTCCCGAAC CGTGCATAGA TCGTATTGCT GACACTGTTG GAAAGTATGA
AGCATTGGCC TGGCTGTGTG GGGGATTAAG CTTTTTTGCG TCTCTGGGAT TGTTGGCTGT GTGGAATGAC AAAGCCTCCA
AGATACCGTT TACACCCAAA GTATATCCGT ATGACAATCT GCGAGTGGAG CTTGGTGGTG AACCGTAG

>Vigan.01G379200.01
MSHSERVTVA LGCVGEGEER RKIRRRKSST MAGRLTNVAS RILGGNGVVY RSVASSLRLR SGMGLPVGKH YIPDKPLPMN
EELLWDNGTP FPEPCIDRIA DTVGKYEALA WLCGGLSFFA SLGLLAVWND KASKIPFTPK VYPYDNLRVE LGGEP*